Gene annotation
Transcriptome id Sobic.004G086500.1
Synonym Sb04g007160
Functional annotation expressed protein
UniProt A0A194YNI1
Pfam PF04862
Panther DB PTHR31265 PTHR31265:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G32460 : Protein of unknown function, DUF642
RAP-DB (Rice) LOC_Os02g11040.1 : expressed protein
MaizeGDB (Corn) Zm00025a019468 , Zm00025a028693
Brachypodium KQJ83352 , KQK12580
Barley HORVU6Hr1G037000.8 , HORVU6Hr1G037000.6 , HORVU6Hr1G037000.7 , HORVU6Hr1G037000.4 , HORVU6Hr1G037000.5 , HORVU6Hr1G037000.2 , HORVU6Hr1G037000.3 , HORVU6Hr1G037000.1
Wheat TraesCS6D02G166800 , TraesCS7D02G442500 , TraesCS6B02G207200 , TraesCS6A02G177500
Populus -


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cDNA sequences
Sobic.004G086500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G277700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
2 Sobic.009G059800 lysine-rich arabinogalactan protein 19 precursor, putative, expressed -
3 Sobic.010G237400 ZmEBE-1 protein, putative, expressed -
4 Sobic.003G369800 - -
5 Sobic.004G056500 - -
6 Sobic.009G059932 - -
7 Sobic.002G102800 PME/invertase inhibitor, putative, expressed -
8 Sobic.004G254300 fasciclin-like arabinogalactan precursor protein, putative, expressed -
9 Sobic.009G059866 - -
10 Sobic.007G218400 - -
11 Sobic.002G343600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@-(PubMedID : 23108465)@polygalacturonase inhibitor 1 precursor, putative, expressed -
12 Sobic.010G144600 - -
13 Sobic.006G076000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@- -
14 Sobic.002G023500 expressed protein -
15 Sobic.003G175300 expressed protein -
16 Sobic.009G019550 - -
17 Sobic.003G175700 - -
18 Sobic.007G035900 expressed protein -
19 Sobic.007G014300 DEF6 - Defensin and Defensin-like DEFL family, expressed -
20 Sobic.003G231000 SbDFR2 expression was not detectable in the seedlings of either sorghum cultivar under our experimental conditions.(PubMedID : 20529887)@dihydroflavonol-4-reductase, putative, expressed K13082: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase


Gene co-expression network
sample Sobic004G086500 Sobic004G086500 Sobic004G277700 Sobic004G277700 Sobic004G086500--Sobic004G277700 Sobic009G059800 Sobic009G059800 Sobic004G086500--Sobic009G059800 Sobic010G237400 Sobic010G237400 Sobic004G086500--Sobic010G237400 Sobic003G369800 Sobic003G369800 Sobic004G086500--Sobic003G369800 Sobic004G056500 Sobic004G056500 Sobic004G086500--Sobic004G056500 Sobic009G059932 Sobic009G059932 Sobic004G086500--Sobic009G059932 Sobic002G102800 Sobic002G102800 Sobic004G086500--Sobic002G102800 Sobic004G254300 Sobic004G254300 Sobic004G086500--Sobic004G254300 Sobic009G059866 Sobic009G059866 Sobic004G086500--Sobic009G059866 Sobic004G277700--Sobic009G059800 Sobic004G277700--Sobic004G086500 Sobic002G344201 Sobic002G344201 Sobic004G277700--Sobic002G344201 Sobic004G277700--Sobic009G059932 Sobic007G218400 Sobic007G218400 Sobic004G277700--Sobic007G218400 Sobic004G277700--Sobic010G237400 Sobic001G456000 Sobic001G456000 Sobic004G277700--Sobic001G456000 Sobic004G277700--Sobic004G254300 Sobic004G277700--Sobic004G056500 Sobic009G059800--Sobic009G059932 Sobic009G059800--Sobic010G237400 Sobic009G059800--Sobic009G059866 Sobic009G059800--Sobic007G218400 Sobic009G059800--Sobic002G102800 Sobic009G059800--Sobic004G056500 Sobic009G059800--Sobic003G369800 Sobic010G144600 Sobic010G144600 Sobic009G059800--Sobic010G144600 Sobic009G059800--Sobic004G254300 Sobic010G237400--Sobic003G369800 Sobic010G237400--Sobic009G059800 Sobic010G237400--Sobic009G059932 Sobic010G237400--Sobic002G102800 Sobic010G237400--Sobic009G059866 Sobic010G237400--Sobic007G218400 Sobic010G237400--Sobic004G056500 Sobic010G237400--Sobic010G144600 Sobic003G175300 Sobic003G175300 Sobic010G237400--Sobic003G175300 Sobic003G369800--Sobic010G237400 Sobic003G369800--Sobic003G175300 Sobic003G369800--Sobic009G059800 Sobic003G369800--Sobic002G102800 Sobic003G369800--Sobic009G059932 Sobic003G369800--Sobic004G056500 Sobic003G369800--Sobic010G144600 Sobic003G369800--Sobic009G059866 Sobic003G369800--Sobic007G218400 Sobic004G056500--Sobic002G102800 Sobic004G056500--Sobic009G059932 Sobic004G056500--Sobic009G059866 Sobic004G056500--Sobic010G144600 Sobic004G056500--Sobic009G059800 Sobic002G023500 Sobic002G023500 Sobic004G056500--Sobic002G023500 Sobic004G056500--Sobic007G218400 Sobic003G175700 Sobic003G175700 Sobic004G056500--Sobic003G175700 Sobic004G056500--Sobic010G237400 Sobic009G059932--Sobic009G059866 Sobic009G059932--Sobic002G102800 Sobic009G059932--Sobic004G056500 Sobic009G059932--Sobic009G059800 Sobic009G059932--Sobic007G218400 Sobic009G059932--Sobic010G237400 Sobic009G059932--Sobic010G144600 Sobic009G059932--Sobic003G369800 Sobic009G059932--Sobic004G254300 Sobic002G102800--Sobic004G056500 Sobic002G102800--Sobic009G059932 Sobic002G102800--Sobic009G059866 Sobic002G102800--Sobic010G144600 Sobic002G102800--Sobic009G059800 Sobic002G102800--Sobic007G218400 Sobic002G102800--Sobic010G237400 Sobic002G102800--Sobic003G175700 Sobic007G014300 Sobic007G014300 Sobic002G102800--Sobic007G014300 Sobic004G254300--Sobic009G059866 Sobic004G254300--Sobic009G059932 Sobic004G254300--Sobic007G218400 Sobic004G254300--Sobic004G056500 Sobic004G254300--Sobic002G102800 Sobic004G254300--Sobic009G059800 Sobic004G254300--Sobic010G237400 Sobic004G254300--Sobic003G369800 Sobic004G254300--Sobic010G144600 Sobic009G059866--Sobic009G059932 Sobic009G059866--Sobic002G102800 Sobic009G059866--Sobic004G056500 Sobic009G059866--Sobic007G218400 Sobic009G059866--Sobic009G059800 Sobic009G059866--Sobic010G144600 Sobic009G059866--Sobic010G237400 Sobic009G059866--Sobic003G369800 Sobic009G059866--Sobic003G175700
Octagon: transcription factors


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