Gene annotation
Transcriptome id Sobic.006G076000.1
Synonym Sb06g016310
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence (PubMedID : 27586543)
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UniProt C5YGB7 , P24152
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G076000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G254300 fasciclin-like arabinogalactan precursor protein, putative, expressed -
2 Sobic.002G343600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@-(PubMedID : 23108465)@polygalacturonase inhibitor 1 precursor, putative, expressed -
3 Sobic.007G218400 - -
4 Sobic.001G139850 - -
5 Sobic.009G059866 - -
6 Sobic.009G059932 - -
7 Sobic.004G086500 expressed protein -
8 Sobic.009G059800 lysine-rich arabinogalactan protein 19 precursor, putative, expressed -
9 Sobic.010G220800 zinc-binding protein, putative, expressed -
10 Sobic.010G237400 ZmEBE-1 protein, putative, expressed -
11 Sobic.002G102800 PME/invertase inhibitor, putative, expressed -
12 Sobic.003G369800 - -
13 Sobic.004G056500 - -
14 Sobic.010G144600 - -
15 Sobic.006G025200 hypothetical protein -
16 Sobic.003G175700 - -
17 Sobic.003G175300 expressed protein -
18 Sobic.002G023500 expressed protein -
19 Sobic.007G035900 expressed protein -
20 Sobic.007G014300 DEF6 - Defensin and Defensin-like DEFL family, expressed -


Gene co-expression network
sample Sobic006G076000 Sobic006G076000 Sobic004G254300 Sobic004G254300 Sobic006G076000--Sobic004G254300 Sobic002G343600 Sobic002G343600 Sobic006G076000--Sobic002G343600 Sobic007G218400 Sobic007G218400 Sobic006G076000--Sobic007G218400 Sobic001G139850 Sobic001G139850 Sobic006G076000--Sobic001G139850 Sobic009G059866 Sobic009G059866 Sobic006G076000--Sobic009G059866 Sobic009G059932 Sobic009G059932 Sobic006G076000--Sobic009G059932 Sobic004G086500 Sobic004G086500 Sobic006G076000--Sobic004G086500 Sobic009G059800 Sobic009G059800 Sobic006G076000--Sobic009G059800 Sobic010G220800 Sobic010G220800 Sobic006G076000--Sobic010G220800 Sobic004G254300--Sobic009G059866 Sobic004G254300--Sobic009G059932 Sobic004G254300--Sobic007G218400 Sobic004G056500 Sobic004G056500 Sobic004G254300--Sobic004G056500 Sobic002G102800 Sobic002G102800 Sobic004G254300--Sobic002G102800 Sobic004G254300--Sobic009G059800 Sobic010G237400 Sobic010G237400 Sobic004G254300--Sobic010G237400 Sobic003G369800 Sobic003G369800 Sobic004G254300--Sobic003G369800 Sobic010G144600 Sobic010G144600 Sobic004G254300--Sobic010G144600 Sobic002G343600--Sobic006G076000 Sobic002G343600--Sobic004G086500 Sobic004G277700 Sobic004G277700 Sobic002G343600--Sobic004G277700 Sobic006G031900 Sobic006G031900 Sobic002G343600--Sobic006G031900 Sobic002G343600--Sobic009G059800 Sobic010G048600 Sobic010G048600 Sobic002G343600--Sobic010G048600 Sobic001G456000 Sobic001G456000 Sobic002G343600--Sobic001G456000 Sobic002G343600--Sobic007G218400 Sobic002G343600--Sobic009G059932 Sobic007G218400--Sobic009G059932 Sobic007G218400--Sobic009G059866 Sobic007G218400--Sobic009G059800 Sobic007G218400--Sobic002G102800 Sobic007G218400--Sobic004G056500 Sobic007G218400--Sobic010G237400 Sobic007G218400--Sobic010G144600 Sobic007G218400--Sobic003G369800 Sobic007G218400--Sobic004G254300 Sobic006G025200 Sobic006G025200 Sobic001G139850--Sobic006G025200 Sobic001G123650 Sobic001G123650 Sobic001G139850--Sobic001G123650 Sobic009G059866--Sobic009G059932 Sobic009G059866--Sobic002G102800 Sobic009G059866--Sobic004G056500 Sobic009G059866--Sobic007G218400 Sobic009G059866--Sobic009G059800 Sobic009G059866--Sobic010G144600 Sobic009G059866--Sobic010G237400 Sobic009G059866--Sobic003G369800 Sobic003G175700 Sobic003G175700 Sobic009G059866--Sobic003G175700 Sobic009G059932--Sobic009G059866 Sobic009G059932--Sobic002G102800 Sobic009G059932--Sobic004G056500 Sobic009G059932--Sobic009G059800 Sobic009G059932--Sobic007G218400 Sobic009G059932--Sobic010G237400 Sobic009G059932--Sobic010G144600 Sobic009G059932--Sobic003G369800 Sobic009G059932--Sobic004G254300 Sobic004G086500--Sobic004G277700 Sobic004G086500--Sobic009G059800 Sobic004G086500--Sobic010G237400 Sobic004G086500--Sobic003G369800 Sobic004G086500--Sobic004G056500 Sobic004G086500--Sobic009G059932 Sobic004G086500--Sobic002G102800 Sobic004G086500--Sobic004G254300 Sobic004G086500--Sobic009G059866 Sobic009G059800--Sobic009G059932 Sobic009G059800--Sobic010G237400 Sobic009G059800--Sobic009G059866 Sobic009G059800--Sobic007G218400 Sobic009G059800--Sobic002G102800 Sobic009G059800--Sobic004G056500 Sobic009G059800--Sobic003G369800 Sobic009G059800--Sobic010G144600 Sobic009G059800--Sobic004G254300 Sobic001G313800 Sobic001G313800 Sobic010G220800--Sobic001G313800 Sobic010G220800--Sobic004G254300 Sobic010G220800--Sobic007G218400 Sobic002G268300 Sobic002G268300 Sobic010G220800--Sobic002G268300 Sobic010G169200 Sobic010G169200 Sobic010G220800--Sobic010G169200 Sobic010G220800--Sobic009G059800 Sobic010G220800--Sobic009G059932 Sobic010G220800--Sobic009G059866 Sobic010G220800--Sobic002G102800
Octagon: transcription factors


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