Gene annotation
Transcriptome id Sobic.002G343600.1
Synonym Sb02g036750,Floral organ regulator1, for1, PGIP2, ATPGIP2
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence (PubMedID : 27586543)
- (PubMedID : 23108465)
polygalacturonase inhibitor 1 precursor, putative, expressed
UniProt I2AW30 , C5XBP7
Pfam PF08263 PF00560 PF13855
Panther DB PTHR27000 PTHR27000:SF129
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G12145 : Leucine-rich repeat (LRR) family protein
RAP-DB (Rice) LOC_Os07g38130.1 : polygalacturonase inhibitor 1 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a014942 , Zm00025a048435
Brachypodium KQK15658
Barley HORVU2Hr1G038990.1 , HORVU2Hr1G038990.2
Wheat -
Populus -


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cDNA sequences
Sobic.002G343600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G076000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@- -
2 Sobic.004G086500 expressed protein -
3 Sobic.004G277700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
4 Sobic.006G031900 expansin precursor, putative, expressed -
5 Sobic.009G059800 lysine-rich arabinogalactan protein 19 precursor, putative, expressed -
6 Sobic.010G048600 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
7 Sobic.001G456000 YABBY domain containing protein, putative, expressed -
8 Sobic.007G218400 - -
9 Sobic.009G059932 - -
10 Sobic.004G254300 fasciclin-like arabinogalactan precursor protein, putative, expressed -
11 Sobic.010G237400 ZmEBE-1 protein, putative, expressed -
12 Sobic.009G059866 - -
13 Sobic.010G220800 zinc-binding protein, putative, expressed -
14 Sobic.002G344201 - -
15 Sobic.010G169200 homeobox domain containing protein, expressed -
16 Sobic.002G102800 PME/invertase inhibitor, putative, expressed -
17 Sobic.004G056500 - -
18 Sobic.003G369800 - -
19 Sobic.001G459300 - -
20 Sobic.005G070700 - -


Gene co-expression network
sample Sobic002G343600 Sobic002G343600 Sobic006G076000 Sobic006G076000 Sobic002G343600--Sobic006G076000 Sobic004G086500 Sobic004G086500 Sobic002G343600--Sobic004G086500 Sobic004G277700 Sobic004G277700 Sobic002G343600--Sobic004G277700 Sobic006G031900 Sobic006G031900 Sobic002G343600--Sobic006G031900 Sobic009G059800 Sobic009G059800 Sobic002G343600--Sobic009G059800 Sobic010G048600 Sobic010G048600 Sobic002G343600--Sobic010G048600 Sobic001G456000 Sobic001G456000 Sobic002G343600--Sobic001G456000 Sobic007G218400 Sobic007G218400 Sobic002G343600--Sobic007G218400 Sobic009G059932 Sobic009G059932 Sobic002G343600--Sobic009G059932 Sobic004G254300 Sobic004G254300 Sobic006G076000--Sobic004G254300 Sobic006G076000--Sobic002G343600 Sobic006G076000--Sobic007G218400 Sobic001G139850 Sobic001G139850 Sobic006G076000--Sobic001G139850 Sobic009G059866 Sobic009G059866 Sobic006G076000--Sobic009G059866 Sobic006G076000--Sobic009G059932 Sobic006G076000--Sobic004G086500 Sobic006G076000--Sobic009G059800 Sobic010G220800 Sobic010G220800 Sobic006G076000--Sobic010G220800 Sobic004G086500--Sobic004G277700 Sobic004G086500--Sobic009G059800 Sobic010G237400 Sobic010G237400 Sobic004G086500--Sobic010G237400 Sobic003G369800 Sobic003G369800 Sobic004G086500--Sobic003G369800 Sobic004G056500 Sobic004G056500 Sobic004G086500--Sobic004G056500 Sobic004G086500--Sobic009G059932 Sobic002G102800 Sobic002G102800 Sobic004G086500--Sobic002G102800 Sobic004G086500--Sobic004G254300 Sobic004G086500--Sobic009G059866 Sobic004G277700--Sobic009G059800 Sobic004G277700--Sobic004G086500 Sobic002G344201 Sobic002G344201 Sobic004G277700--Sobic002G344201 Sobic004G277700--Sobic009G059932 Sobic004G277700--Sobic007G218400 Sobic004G277700--Sobic010G237400 Sobic004G277700--Sobic001G456000 Sobic004G277700--Sobic004G254300 Sobic004G277700--Sobic004G056500 Sobic006G031900--Sobic002G343600 Sobic006G031900--Sobic004G086500 Sobic006G031900--Sobic004G277700 Sobic001G157700 Sobic001G157700 Sobic006G031900--Sobic001G157700 Sobic002G178800 Sobic002G178800 Sobic006G031900--Sobic002G178800 Sobic006G031900--Sobic010G048600 Sobic005G070700 Sobic005G070700 Sobic006G031900--Sobic005G070700 Sobic001G274300 Sobic001G274300 Sobic006G031900--Sobic001G274300 Sobic001G459300 Sobic001G459300 Sobic006G031900--Sobic001G459300 Sobic009G059800--Sobic009G059932 Sobic009G059800--Sobic010G237400 Sobic009G059800--Sobic009G059866 Sobic009G059800--Sobic007G218400 Sobic009G059800--Sobic002G102800 Sobic009G059800--Sobic004G056500 Sobic009G059800--Sobic003G369800 Sobic010G144600 Sobic010G144600 Sobic009G059800--Sobic010G144600 Sobic009G059800--Sobic004G254300 Sobic010G048600--Sobic001G459300 Sobic010G048600--Sobic005G070700 Sobic001G459400 Sobic001G459400 Sobic010G048600--Sobic001G459400 Sobic001G106500 Sobic001G106500 Sobic010G048600--Sobic001G106500 Sobic010G048600--Sobic001G274300 Sobic010G048600--Sobic001G456000 Sobic003G092300 Sobic003G092300 Sobic010G048600--Sobic003G092300 Sobic002G078900 Sobic002G078900 Sobic010G048600--Sobic002G078900 Sobic010G183800 Sobic010G183800 Sobic010G048600--Sobic010G183800 Sobic001G456000--Sobic002G078900 Sobic001G456000--Sobic010G183800 Sobic001G456000--Sobic001G459300 Sobic001G456000--Sobic010G048600 Sobic001G456000--Sobic001G459400 Sobic001G456000--Sobic001G106500 Sobic001G456000--Sobic005G070700 Sobic003G243100 Sobic003G243100 Sobic001G456000--Sobic003G243100 Sobic001G456000--Sobic004G277700 Sobic007G218400--Sobic009G059932 Sobic007G218400--Sobic009G059866 Sobic007G218400--Sobic009G059800 Sobic007G218400--Sobic002G102800 Sobic007G218400--Sobic004G056500 Sobic007G218400--Sobic010G237400 Sobic007G218400--Sobic010G144600 Sobic007G218400--Sobic003G369800 Sobic007G218400--Sobic004G254300 Sobic009G059932--Sobic009G059866 Sobic009G059932--Sobic002G102800 Sobic009G059932--Sobic004G056500 Sobic009G059932--Sobic009G059800 Sobic009G059932--Sobic007G218400 Sobic009G059932--Sobic010G237400 Sobic009G059932--Sobic010G144600 Sobic009G059932--Sobic003G369800 Sobic009G059932--Sobic004G254300
Octagon: transcription factors


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