Gene annotation
Transcriptome id Sobic.005G070700.2
Synonym
Functional annotation -
UniProt A0A1Z5RHI1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G459300 - -
2 Sobic.010G048600 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
3 Sobic.001G459400 B3 DNA binding domain containing protein, expressed -
4 Sobic.001G274300 GASR1 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, putative -
5 Sobic.001G106500 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
6 Sobic.003G092300 expressed protein K04506: E3 ubiquitin-protein ligase SIAH1
7 Sobic.001G456000 YABBY domain containing protein, putative, expressed -
8 Sobic.005G070101 - -
9 Sobic.004G168000 pectinesterase inhibitor domain containing protein, putative, expressed -
10 Sobic.002G159000 60S ribosomal protein L22-2, putative, expressed K02891: RP-L22e, large subunit ribosomal protein L22e
11 Sobic.002G078900 agenet domain containing protein, expressed -
12 Sobic.006G015100 expressed protein -
13 Sobic.009G075500 OsMADS58 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
14 Sobic.010G183800 - K11594: DDX3X, ATP-dependent RNA helicase DDX3X
15 Sobic.002G239101 - -
16 Sobic.004G277700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
17 Sobic.006G134700 endoglucanase, putative, expressed -
18 Sobic.002G344201 - -
19 Sobic.003G300000 expressed protein -
20 Sobic.009G063700 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -


Gene co-expression network
sample Sobic005G070700 Sobic005G070700 Sobic001G459300 Sobic001G459300 Sobic005G070700--Sobic001G459300 Sobic010G048600 Sobic010G048600 Sobic005G070700--Sobic010G048600 Sobic001G459400 Sobic001G459400 Sobic005G070700--Sobic001G459400 Sobic001G274300 Sobic001G274300 Sobic005G070700--Sobic001G274300 Sobic001G106500 Sobic001G106500 Sobic005G070700--Sobic001G106500 Sobic003G092300 Sobic003G092300 Sobic005G070700--Sobic003G092300 Sobic001G456000 Sobic001G456000 Sobic005G070700--Sobic001G456000 Sobic005G070101 Sobic005G070101 Sobic005G070700--Sobic005G070101 Sobic004G168000 Sobic004G168000 Sobic005G070700--Sobic004G168000 Sobic001G459300--Sobic005G070700 Sobic001G459300--Sobic010G048600 Sobic001G459300--Sobic001G459400 Sobic001G459300--Sobic001G106500 Sobic001G459300--Sobic001G274300 Sobic001G459300--Sobic001G456000 Sobic001G459300--Sobic003G092300 Sobic002G078900 Sobic002G078900 Sobic001G459300--Sobic002G078900 Sobic010G183800 Sobic010G183800 Sobic001G459300--Sobic010G183800 Sobic010G048600--Sobic001G459300 Sobic010G048600--Sobic005G070700 Sobic010G048600--Sobic001G459400 Sobic010G048600--Sobic001G106500 Sobic010G048600--Sobic001G274300 Sobic010G048600--Sobic001G456000 Sobic010G048600--Sobic003G092300 Sobic010G048600--Sobic002G078900 Sobic010G048600--Sobic010G183800 Sobic001G459400--Sobic003G092300 Sobic001G459400--Sobic001G459300 Sobic001G459400--Sobic005G070700 Sobic001G459400--Sobic010G183800 Sobic001G459400--Sobic010G048600 Sobic009G075500 Sobic009G075500 Sobic001G459400--Sobic009G075500 Sobic001G459400--Sobic002G078900 Sobic009G063700 Sobic009G063700 Sobic001G459400--Sobic009G063700 Sobic006G015100 Sobic006G015100 Sobic001G459400--Sobic006G015100 Sobic001G274300--Sobic005G070700 Sobic001G274300--Sobic001G459300 Sobic001G274300--Sobic010G048600 Sobic001G274300--Sobic001G459400 Sobic001G274300--Sobic001G106500 Sobic001G274300--Sobic006G015100 Sobic001G274300--Sobic001G456000 Sobic001G274300--Sobic003G092300 Sobic001G274300--Sobic002G078900 Sobic001G106500--Sobic001G459300 Sobic001G106500--Sobic010G048600 Sobic001G106500--Sobic003G092300 Sobic001G106500--Sobic001G456000 Sobic001G106500--Sobic005G070700 Sobic003G046400 Sobic003G046400 Sobic001G106500--Sobic003G046400 Sobic001G106500--Sobic002G078900 Sobic001G106500--Sobic001G459400 Sobic001G106500--Sobic010G183800 Sobic003G092300--Sobic001G459400 Sobic003G092300--Sobic010G183800 Sobic003G092300--Sobic001G459300 Sobic003G092300--Sobic001G106500 Sobic003G300000 Sobic003G300000 Sobic003G092300--Sobic003G300000 Sobic003G092300--Sobic010G048600 Sobic003G092300--Sobic009G075500 Sobic001G158100 Sobic001G158100 Sobic003G092300--Sobic001G158100 Sobic003G092300--Sobic005G070700 Sobic001G456000--Sobic002G078900 Sobic001G456000--Sobic010G183800 Sobic001G456000--Sobic001G459300 Sobic001G456000--Sobic010G048600 Sobic001G456000--Sobic001G459400 Sobic001G456000--Sobic001G106500 Sobic001G456000--Sobic005G070700 Sobic003G243100 Sobic003G243100 Sobic001G456000--Sobic003G243100 Sobic004G277700 Sobic004G277700 Sobic001G456000--Sobic004G277700 Sobic005G070101--Sobic004G168000 Sobic002G159000 Sobic002G159000 Sobic005G070101--Sobic002G159000 Sobic002G239101 Sobic002G239101 Sobic005G070101--Sobic002G239101 Sobic006G134700 Sobic006G134700 Sobic005G070101--Sobic006G134700 Sobic006G213900 Sobic006G213900 Sobic005G070101--Sobic006G213900 Sobic001G235200 Sobic001G235200 Sobic005G070101--Sobic001G235200 Sobic009G179000 Sobic009G179000 Sobic005G070101--Sobic009G179000 Sobic005G070101--Sobic001G459400 Sobic005G070101--Sobic005G070700 Sobic004G168000--Sobic004G168000 Sobic004G168000--Sobic002G159000 Sobic004G168000--Sobic002G239101 Sobic004G168000--Sobic006G134700 Sobic004G168000--Sobic006G213900 Sobic004G168000--Sobic001G235200 Sobic004G168000--Sobic009G179000 Sobic004G168000--Sobic001G459400 Sobic004G168000--Sobic005G070700
Octagon: transcription factors


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