Gene annotation
Transcriptome id Sobic.001G106500.1
Synonym SbEPFL2, Sb01g009510, epidermal patterning factor/EPF-like
Functional annotation Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure. (PubMedID : 23755192)
expressed protein
UniProt C5WM21
Pfam -
Panther DB PTHR33109 PTHR33109:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G37810 : -
RAP-DB (Rice) LOC_Os03g51660.1 : expressed protein
MaizeGDB (Corn) Zm00025a007975
Brachypodium KQK13428
Barley HORVU4Hr1G009630.2 , HORVU4Hr1G009630.1
Wheat TraesCS4D02G057700 , TraesCS4A02G257000 , TraesCS4B02G057500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G459300 - -
2 Sobic.010G048600 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
3 Sobic.003G092300 expressed protein K04506: E3 ubiquitin-protein ligase SIAH1
4 Sobic.001G456000 YABBY domain containing protein, putative, expressed -
5 Sobic.005G070700 - -
6 Sobic.003G046400 transcriptional corepressor LEUNIG, putative, expressed -
7 Sobic.002G078900 agenet domain containing protein, expressed -
8 Sobic.001G459400 B3 DNA binding domain containing protein, expressed -
9 Sobic.010G183800 - K11594: DDX3X, ATP-dependent RNA helicase DDX3X
10 Sobic.009G048300 transcription factor X1, putative, expressed -
11 Sobic.001G274300 GASR1 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, putative -
12 Sobic.006G015100 expressed protein -
13 Sobic.003G300000 expressed protein -
14 Sobic.002G344201 - -
15 Sobic.003G117200 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed -
16 Sobic.004G277700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
17 Sobic.001G071600 GYF domain containing protein, putative, expressed K18730: PERQ amino acid-rich with GYF domain-containing protein
18 Sobic.007G121200 YDG/SRA domain containing protein, expressed -
19 Sobic.007G137101 R2R3 MYB transcription factor(PubMedID : 33633216) K09422: transcription factor MYB, plant
20 Sobic.003G316601 - -


Gene co-expression network
sample Sobic001G106500 Sobic001G106500 Sobic001G459300 Sobic001G459300 Sobic001G106500--Sobic001G459300 Sobic010G048600 Sobic010G048600 Sobic001G106500--Sobic010G048600 Sobic003G092300 Sobic003G092300 Sobic001G106500--Sobic003G092300 Sobic001G456000 Sobic001G456000 Sobic001G106500--Sobic001G456000 Sobic005G070700 Sobic005G070700 Sobic001G106500--Sobic005G070700 Sobic003G046400 Sobic003G046400 Sobic001G106500--Sobic003G046400 Sobic002G078900 Sobic002G078900 Sobic001G106500--Sobic002G078900 Sobic001G459400 Sobic001G459400 Sobic001G106500--Sobic001G459400 Sobic010G183800 Sobic010G183800 Sobic001G106500--Sobic010G183800 Sobic001G459300--Sobic005G070700 Sobic001G459300--Sobic010G048600 Sobic001G459300--Sobic001G459400 Sobic001G459300--Sobic001G106500 Sobic001G274300 Sobic001G274300 Sobic001G459300--Sobic001G274300 Sobic001G459300--Sobic001G456000 Sobic001G459300--Sobic003G092300 Sobic001G459300--Sobic002G078900 Sobic001G459300--Sobic010G183800 Sobic010G048600--Sobic001G459300 Sobic010G048600--Sobic005G070700 Sobic010G048600--Sobic001G459400 Sobic010G048600--Sobic001G106500 Sobic010G048600--Sobic001G274300 Sobic010G048600--Sobic001G456000 Sobic010G048600--Sobic003G092300 Sobic010G048600--Sobic002G078900 Sobic010G048600--Sobic010G183800 Sobic003G092300--Sobic001G459400 Sobic003G092300--Sobic010G183800 Sobic003G092300--Sobic001G459300 Sobic003G092300--Sobic001G106500 Sobic003G300000 Sobic003G300000 Sobic003G092300--Sobic003G300000 Sobic003G092300--Sobic010G048600 Sobic009G075500 Sobic009G075500 Sobic003G092300--Sobic009G075500 Sobic001G158100 Sobic001G158100 Sobic003G092300--Sobic001G158100 Sobic003G092300--Sobic005G070700 Sobic001G456000--Sobic002G078900 Sobic001G456000--Sobic010G183800 Sobic001G456000--Sobic001G459300 Sobic001G456000--Sobic010G048600 Sobic001G456000--Sobic001G459400 Sobic001G456000--Sobic001G106500 Sobic001G456000--Sobic005G070700 Sobic003G243100 Sobic003G243100 Sobic001G456000--Sobic003G243100 Sobic004G277700 Sobic004G277700 Sobic001G456000--Sobic004G277700 Sobic005G070700--Sobic001G459300 Sobic005G070700--Sobic010G048600 Sobic005G070700--Sobic001G459400 Sobic005G070700--Sobic001G274300 Sobic005G070700--Sobic001G106500 Sobic005G070700--Sobic003G092300 Sobic005G070700--Sobic001G456000 Sobic005G070101 Sobic005G070101 Sobic005G070700--Sobic005G070101 Sobic004G168000 Sobic004G168000 Sobic005G070700--Sobic004G168000 Sobic001G455900 Sobic001G455900 Sobic003G046400--Sobic001G455900 Sobic001G071600 Sobic001G071600 Sobic003G046400--Sobic001G071600 Sobic007G033700 Sobic007G033700 Sobic003G046400--Sobic007G033700 Sobic003G046400--Sobic001G106500 Sobic006G271600 Sobic006G271600 Sobic003G046400--Sobic006G271600 Sobic003G046400--Sobic010G183800 Sobic006G163300 Sobic006G163300 Sobic003G046400--Sobic006G163300 Sobic010G070900 Sobic010G070900 Sobic003G046400--Sobic010G070900 Sobic009G048300 Sobic009G048300 Sobic003G046400--Sobic009G048300 Sobic002G078900--Sobic001G456000 Sobic002G078900--Sobic010G183800 Sobic002G078900--Sobic001G459400 Sobic002G078900--Sobic003G300000 Sobic002G078900--Sobic001G106500 Sobic002G078900--Sobic001G071600 Sobic002G078900--Sobic001G459300 Sobic002G078900--Sobic003G092300 Sobic009G243000 Sobic009G243000 Sobic002G078900--Sobic009G243000 Sobic001G459400--Sobic003G092300 Sobic001G459400--Sobic001G459300 Sobic001G459400--Sobic005G070700 Sobic001G459400--Sobic010G183800 Sobic001G459400--Sobic010G048600 Sobic001G459400--Sobic009G075500 Sobic001G459400--Sobic002G078900 Sobic009G063700 Sobic009G063700 Sobic001G459400--Sobic009G063700 Sobic006G015100 Sobic006G015100 Sobic001G459400--Sobic006G015100 Sobic010G183800--Sobic003G092300 Sobic010G183800--Sobic001G459400 Sobic010G183800--Sobic002G078900 Sobic010G183800--Sobic003G300000 Sobic010G183800--Sobic001G456000 Sobic010G183800--Sobic009G063700 Sobic010G183800--Sobic001G071600 Sobic010G183800--Sobic001G158100 Sobic010G183800--Sobic001G106500
Octagon: transcription factors


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