Gene annotation
Transcriptome id Sobic.003G046400.3,Sobic.003G046400.2,Sobic.003G046400.5
Synonym LUG, RON2
Functional annotation transcriptional corepressor LEUNIG, putative, expressed
UniProt A0A1B6Q1F9 , A0A1B6Q1B6 , A0A1B6Q1C5
Pfam PF08513 PF00400
Panther DB PTHR22847 PTHR22847:SF437
NCBI CDD KOG0266; WD40 repeat-containing protein
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT4G32551 : LisH dimerisation motif;WD40/YVTN repeat-like-containing domain
RAP-DB (Rice) LOC_Os01g08190.1 : transcriptional corepressor LEUNIG, putative, expressed
MaizeGDB (Corn) Zm00025a035741
Brachypodium PNT70067 , KQK02986
Barley HORVU3Hr1G022900.27 , HORVU3Hr1G022900.26 , HORVU3Hr1G022900.25 , HORVU3Hr1G022900.24 , HORVU3Hr1G022900.23 , HORVU3Hr1G022900.22 , HORVU3Hr1G022900.21 , HORVU3Hr1G022900.20 , HORVU3Hr1G022900.29 , HORVU3Hr1G022900.28 , HORVU3Hr1G022900.34 , HORVU3Hr1G022900.35 , HORVU3Hr1G022900.36 , HORVU3Hr1G022900.37 , HORVU3Hr1G022900.30 , HORVU3Hr1G022900.31 , HORVU3Hr1G022900.32 , HORVU3Hr1G022900.33 , HORVU3Hr1G022900.38 , HORVU3Hr1G022900.39 , HORVU3Hr1G022900.8 , HORVU3Hr1G022900.9 , HORVU3Hr1G022900.4 , HORVU3Hr1G022900.5 , HORVU3Hr1G022900.6 , HORVU3Hr1G022900.7 , HORVU3Hr1G022900.1 , HORVU3Hr1G022900.2 , HORVU3Hr1G022900.3 , HORVU3Hr1G022900.18 , HORVU3Hr1G022900.19 , HORVU3Hr1G022900.16 , HORVU3Hr1G022900.17 , HORVU3Hr1G022900.14 , HORVU3Hr1G022900.15 , HORVU3Hr1G022900.12 , HORVU3Hr1G022900.13 , HORVU3Hr1G022900.10 , HORVU3Hr1G022900.11
Wheat TraesCS3D02G124800 , TraesCS3D02G124800 , TraesCS3D02G124800 , TraesCS3D02G124800 , TraesCS3D02G124800 , TraesCS3D02G124800 , TraesCS3A02G123100 , TraesCS3A02G123100 , TraesCS3A02G123100 , TraesCS3B02G142300 , TraesCS3B02G142300 , TraesCS3B02G142300 , TraesCS3B02G142300 , TraesCS3B02G142300 , TraesCS3B02G142300 , TraesCS3A02G123100 , TraesCS3A02G123100 , TraesCS3A02G123100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G455900 "qGL3-2/qLGY3(Ortholog in rice:Yu et al., 2018/Liu et al., 2018)"(PubMedID : 31659846)@determinacy of the spikelet meristem and determining the identity of lemmas and paleas(PubMedID : 15208396)@OsMADS1 - MADS-box family gene with MIKCc type-box, expressed -
2 Sobic.001G071600 GYF domain containing protein, putative, expressed K18730: PERQ amino acid-rich with GYF domain-containing protein
3 Sobic.007G033700 OsFBX309 - F-box domain containing protein, expressed -
4 Sobic.001G106500 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
5 Sobic.006G271600 RNA recognition motif containing protein, putative, expressed K13126: polyadenylate-binding protein
6 Sobic.010G183800 - K11594: DDX3X, ATP-dependent RNA helicase DDX3X
7 Sobic.006G163300 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
8 Sobic.010G070900 keratin, type I cytoskeletal 9, putative, expressed -
9 Sobic.009G048300 transcription factor X1, putative, expressed -
10 Sobic.002G078900 agenet domain containing protein, expressed -
11 Sobic.009G243000 OsFBL2 - F-box domain and LRR containing protein, expressed -
12 Sobic.007G147200 OsSub56 - Putative Subtilisin homologue, expressed -
13 Sobic.007G121200 YDG/SRA domain containing protein, expressed -
14 Sobic.003G117200 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed -
15 Sobic.001G456000 YABBY domain containing protein, putative, expressed -
16 Sobic.001G137600 ankyrin, putative, expressed -
17 Sobic.003G300000 expressed protein -
18 Sobic.003G092300 expressed protein K04506: E3 ubiquitin-protein ligase SIAH1
19 Sobic.002G426000 - -
20 Sobic.003G238800 GDSL-like lipase/acylhydrolase, putative, expressed -


Gene co-expression network
sample Sobic003G046400 Sobic003G046400 Sobic001G455900 Sobic001G455900 Sobic003G046400--Sobic001G455900 Sobic001G071600 Sobic001G071600 Sobic003G046400--Sobic001G071600 Sobic007G033700 Sobic007G033700 Sobic003G046400--Sobic007G033700 Sobic001G106500 Sobic001G106500 Sobic003G046400--Sobic001G106500 Sobic006G271600 Sobic006G271600 Sobic003G046400--Sobic006G271600 Sobic010G183800 Sobic010G183800 Sobic003G046400--Sobic010G183800 Sobic006G163300 Sobic006G163300 Sobic003G046400--Sobic006G163300 Sobic010G070900 Sobic010G070900 Sobic003G046400--Sobic010G070900 Sobic009G048300 Sobic009G048300 Sobic003G046400--Sobic009G048300 Sobic001G455900--Sobic003G046400 Sobic001G455900--Sobic006G163300 Sobic001G455900--Sobic007G033700 Sobic009G243000 Sobic009G243000 Sobic001G455900--Sobic009G243000 Sobic010G247000 Sobic010G247000 Sobic001G455900--Sobic010G247000 Sobic001G455900--Sobic006G271600 Sobic001G455900--Sobic001G071600 Sobic001G137600 Sobic001G137600 Sobic001G455900--Sobic001G137600 Sobic001G455900--Sobic010G070900 Sobic001G071600--Sobic006G271600 Sobic001G071600--Sobic003G046400 Sobic001G071600--Sobic010G183800 Sobic002G078900 Sobic002G078900 Sobic001G071600--Sobic002G078900 Sobic001G071600--Sobic009G048300 Sobic001G071600--Sobic009G243000 Sobic001G456000 Sobic001G456000 Sobic001G071600--Sobic001G456000 Sobic003G300000 Sobic003G300000 Sobic001G071600--Sobic003G300000 Sobic004G281000 Sobic004G281000 Sobic001G071600--Sobic004G281000 Sobic007G033700--Sobic003G046400 Sobic007G033700--Sobic009G243000 Sobic007G033700--Sobic001G137600 Sobic007G033700--Sobic001G455900 Sobic007G033700--Sobic006G163300 Sobic007G033700--Sobic010G070900 Sobic007G033700--Sobic006G271600 Sobic007G033700--Sobic001G071600 Sobic004G237000 Sobic004G237000 Sobic007G033700--Sobic004G237000 Sobic001G459300 Sobic001G459300 Sobic001G106500--Sobic001G459300 Sobic010G048600 Sobic010G048600 Sobic001G106500--Sobic010G048600 Sobic003G092300 Sobic003G092300 Sobic001G106500--Sobic003G092300 Sobic001G106500--Sobic001G456000 Sobic005G070700 Sobic005G070700 Sobic001G106500--Sobic005G070700 Sobic001G106500--Sobic003G046400 Sobic001G106500--Sobic002G078900 Sobic001G459400 Sobic001G459400 Sobic001G106500--Sobic001G459400 Sobic001G106500--Sobic010G183800 Sobic006G271600--Sobic001G071600 Sobic010G194600 Sobic010G194600 Sobic006G271600--Sobic010G194600 Sobic003G117200 Sobic003G117200 Sobic006G271600--Sobic003G117200 Sobic006G271600--Sobic009G243000 Sobic006G271600--Sobic003G300000 Sobic006G271600--Sobic002G078900 Sobic006G271600--Sobic003G046400 Sobic006G271600--Sobic010G183800 Sobic003G088600 Sobic003G088600 Sobic006G271600--Sobic003G088600 Sobic010G183800--Sobic003G092300 Sobic010G183800--Sobic001G459400 Sobic010G183800--Sobic002G078900 Sobic010G183800--Sobic003G300000 Sobic010G183800--Sobic001G456000 Sobic009G063700 Sobic009G063700 Sobic010G183800--Sobic009G063700 Sobic010G183800--Sobic001G071600 Sobic001G158100 Sobic001G158100 Sobic010G183800--Sobic001G158100 Sobic010G183800--Sobic001G106500 Sobic002G360600 Sobic002G360600 Sobic006G163300--Sobic002G360600 Sobic006G163300--Sobic001G455900 Sobic006G163300--Sobic003G046400 Sobic003G010700 Sobic003G010700 Sobic006G163300--Sobic003G010700 Sobic006G163300--Sobic010G070900 Sobic007G147200 Sobic007G147200 Sobic006G163300--Sobic007G147200 Sobic006G163300--Sobic007G033700 Sobic006G107500 Sobic006G107500 Sobic006G163300--Sobic006G107500 Sobic001G101900 Sobic001G101900 Sobic006G163300--Sobic001G101900 Sobic010G070900--Sobic007G147200 Sobic010G070900--Sobic002G360600 Sobic010G070900--Sobic003G046400 Sobic010G070900--Sobic006G163300 Sobic010G070900--Sobic006G107500 Sobic002G426000 Sobic002G426000 Sobic010G070900--Sobic002G426000 Sobic010G070900--Sobic007G033700 Sobic010G168700 Sobic010G168700 Sobic010G070900--Sobic010G168700 Sobic001G143400 Sobic001G143400 Sobic010G070900--Sobic001G143400 Sobic009G048300--Sobic001G071600 Sobic009G048300--Sobic010G183800 Sobic009G048300--Sobic002G078900 Sobic009G048300--Sobic001G106500 Sobic009G048300--Sobic003G046400 Sobic009G048300--Sobic003G300000 Sobic009G048300--Sobic003G092300 Sobic009G048300--Sobic001G456000 Sobic009G048300--Sobic001G459400
Octagon: transcription factors


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