Gene annotation
Transcriptome id Sobic.007G033700.1
Synonym Sb07g002890
Functional annotation OsFBX309 - F-box domain containing protein, expressed
UniProt A0A1B6PFM7
Pfam -
Panther DB PTHR33207 PTHR33207:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os09g08620.1 : OsFBX309 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS1D02G092800 , TraesCS1A02G100200 , TraesCS1A02G100200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G046400 transcriptional corepressor LEUNIG, putative, expressed -
2 Sobic.009G243000 OsFBL2 - F-box domain and LRR containing protein, expressed -
3 Sobic.001G137600 ankyrin, putative, expressed -
4 Sobic.001G455900 "qGL3-2/qLGY3(Ortholog in rice:Yu et al., 2018/Liu et al., 2018)"(PubMedID : 31659846)@determinacy of the spikelet meristem and determining the identity of lemmas and paleas(PubMedID : 15208396)@OsMADS1 - MADS-box family gene with MIKCc type-box, expressed -
5 Sobic.006G163300 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
6 Sobic.010G070900 keratin, type I cytoskeletal 9, putative, expressed -
7 Sobic.006G271600 RNA recognition motif containing protein, putative, expressed K13126: polyadenylate-binding protein
8 Sobic.001G071600 GYF domain containing protein, putative, expressed K18730: PERQ amino acid-rich with GYF domain-containing protein
9 Sobic.004G237000 down-regulated TF in developmental senescence(PubMedID : 27586543)@"PGL2(Ortholog in rice:Heang and Sassa, 2012b(PubMedID : 31659886)@helix-loop-helix DNA-binding domain containing protein, expressed -
10 Sobic.002G078900 agenet domain containing protein, expressed -
11 Sobic.002G205000 ZOS9-06 - C2H2 zinc finger protein, expressed -
12 Sobic.003G117200 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed -
13 Sobic.002G426000 - -
14 Sobic.001G106500 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
15 Sobic.007G147200 OsSub56 - Putative Subtilisin homologue, expressed -
16 Sobic.010G183800 - K11594: DDX3X, ATP-dependent RNA helicase DDX3X
17 Sobic.002G360600 expressed protein -
18 Sobic.010G247000 expressed protein -
19 Sobic.009G048300 transcription factor X1, putative, expressed -
20 Sobic.003G191600 expressed protein -


Gene co-expression network
sample Sobic007G033700 Sobic007G033700 Sobic003G046400 Sobic003G046400 Sobic007G033700--Sobic003G046400 Sobic009G243000 Sobic009G243000 Sobic007G033700--Sobic009G243000 Sobic001G137600 Sobic001G137600 Sobic007G033700--Sobic001G137600 Sobic001G455900 Sobic001G455900 Sobic007G033700--Sobic001G455900 Sobic006G163300 Sobic006G163300 Sobic007G033700--Sobic006G163300 Sobic010G070900 Sobic010G070900 Sobic007G033700--Sobic010G070900 Sobic006G271600 Sobic006G271600 Sobic007G033700--Sobic006G271600 Sobic001G071600 Sobic001G071600 Sobic007G033700--Sobic001G071600 Sobic004G237000 Sobic004G237000 Sobic007G033700--Sobic004G237000 Sobic003G046400--Sobic001G455900 Sobic003G046400--Sobic001G071600 Sobic003G046400--Sobic007G033700 Sobic001G106500 Sobic001G106500 Sobic003G046400--Sobic001G106500 Sobic003G046400--Sobic006G271600 Sobic010G183800 Sobic010G183800 Sobic003G046400--Sobic010G183800 Sobic003G046400--Sobic006G163300 Sobic003G046400--Sobic010G070900 Sobic009G048300 Sobic009G048300 Sobic003G046400--Sobic009G048300 Sobic009G243000--Sobic007G033700 Sobic002G078900 Sobic002G078900 Sobic009G243000--Sobic002G078900 Sobic009G243000--Sobic006G271600 Sobic009G243000--Sobic001G071600 Sobic002G205000 Sobic002G205000 Sobic009G243000--Sobic002G205000 Sobic003G006000 Sobic003G006000 Sobic009G243000--Sobic003G006000 Sobic009G243000--Sobic003G046400 Sobic009G243000--Sobic001G137600 Sobic002G258000 Sobic002G258000 Sobic009G243000--Sobic002G258000 Sobic001G137600--Sobic007G033700 Sobic001G137600--Sobic006G271600 Sobic001G137600--Sobic009G243000 Sobic001G137600--Sobic003G046400 Sobic001G137600--Sobic001G455900 Sobic003G117200 Sobic003G117200 Sobic001G137600--Sobic003G117200 Sobic001G137600--Sobic006G163300 Sobic001G137600--Sobic001G071600 Sobic010G194600 Sobic010G194600 Sobic001G137600--Sobic010G194600 Sobic001G455900--Sobic003G046400 Sobic001G455900--Sobic006G163300 Sobic001G455900--Sobic007G033700 Sobic001G455900--Sobic009G243000 Sobic010G247000 Sobic010G247000 Sobic001G455900--Sobic010G247000 Sobic001G455900--Sobic006G271600 Sobic001G455900--Sobic001G071600 Sobic001G455900--Sobic001G137600 Sobic001G455900--Sobic010G070900 Sobic002G360600 Sobic002G360600 Sobic006G163300--Sobic002G360600 Sobic006G163300--Sobic001G455900 Sobic006G163300--Sobic003G046400 Sobic003G010700 Sobic003G010700 Sobic006G163300--Sobic003G010700 Sobic006G163300--Sobic010G070900 Sobic007G147200 Sobic007G147200 Sobic006G163300--Sobic007G147200 Sobic006G163300--Sobic007G033700 Sobic006G107500 Sobic006G107500 Sobic006G163300--Sobic006G107500 Sobic001G101900 Sobic001G101900 Sobic006G163300--Sobic001G101900 Sobic010G070900--Sobic007G147200 Sobic010G070900--Sobic002G360600 Sobic010G070900--Sobic003G046400 Sobic010G070900--Sobic006G163300 Sobic010G070900--Sobic006G107500 Sobic002G426000 Sobic002G426000 Sobic010G070900--Sobic002G426000 Sobic010G070900--Sobic007G033700 Sobic010G168700 Sobic010G168700 Sobic010G070900--Sobic010G168700 Sobic001G143400 Sobic001G143400 Sobic010G070900--Sobic001G143400 Sobic006G271600--Sobic001G071600 Sobic006G271600--Sobic010G194600 Sobic006G271600--Sobic003G117200 Sobic006G271600--Sobic009G243000 Sobic003G300000 Sobic003G300000 Sobic006G271600--Sobic003G300000 Sobic006G271600--Sobic002G078900 Sobic006G271600--Sobic003G046400 Sobic006G271600--Sobic010G183800 Sobic003G088600 Sobic003G088600 Sobic006G271600--Sobic003G088600 Sobic001G071600--Sobic006G271600 Sobic001G071600--Sobic003G046400 Sobic001G071600--Sobic010G183800 Sobic001G071600--Sobic002G078900 Sobic001G071600--Sobic009G048300 Sobic001G071600--Sobic009G243000 Sobic001G456000 Sobic001G456000 Sobic001G071600--Sobic001G456000 Sobic001G071600--Sobic003G300000 Sobic004G281000 Sobic004G281000 Sobic001G071600--Sobic004G281000 Sobic003G316601 Sobic003G316601 Sobic004G237000--Sobic003G316601 Sobic003G085900 Sobic003G085900 Sobic004G237000--Sobic003G085900 Sobic004G237000--Sobic007G033700 Sobic004G237000--Sobic003G046400 Sobic004G237000--Sobic010G070900 Sobic004G237000--Sobic002G426000 Sobic004G237000--Sobic007G147200 Sobic004G237000--Sobic009G243000 Sobic004G237000--Sobic001G106500
Octagon: transcription factors


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