Gene annotation
Transcriptome id Sobic.006G163300.3,Sobic.006G163300.2
Synonym ALDH3F1, Sb06g023975
Functional annotation aldehyde dehydrogenase, putative, expressed
UniProt A0A1Z5REV8
Pfam PF00171
Panther DB PTHR11699 PTHR11699:SF117
NCBI CDD -
KEGG Orthology K00128; aldehyde dehydrogenase (NAD+)
Gene Ontology GO:0016491; oxidoreductase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT4G36250 : aldehyde dehydrogenase 3F1
RAP-DB (Rice) LOC_Os04g45720.1 : aldehyde dehydrogenase, putative, expressed
MaizeGDB (Corn) Zm00025a056618
Brachypodium KQJ83836 , KQJ83837
Barley HORVU2Hr1G092530.9 , HORVU2Hr1G092530.8 , HORVU6Hr1G042160.5 , HORVU6Hr1G042160.4 , HORVU6Hr1G042160.7 , HORVU6Hr1G042160.6 , HORVU6Hr1G042160.1 , HORVU6Hr1G042160.3 , HORVU6Hr1G042160.2 , HORVU6Hr1G042160.9 , HORVU6Hr1G042160.8 , HORVU2Hr1G092530.16 , HORVU4Hr1G041570.5 , HORVU4Hr1G041570.4 , HORVU4Hr1G041570.7 , HORVU4Hr1G041570.6 , HORVU4Hr1G041570.1 , HORVU4Hr1G041570.3 , HORVU4Hr1G041570.2 , HORVU2Hr1G092530.13 , HORVU4Hr1G041570.8 , HORVU2Hr1G092530.12 , HORVU2Hr1G092530.10 , HORVU6Hr1G061220.9 , HORVU6Hr1G061220.7 , HORVU6Hr1G061220.6 , HORVU6Hr1G042160.11 , HORVU6Hr1G042160.10 , HORVU2Hr1G092530.14 , HORVU2Hr1G092530.7 , HORVU2Hr1G092530.6 , HORVU2Hr1G092530.5 , HORVU2Hr1G092530.4 , HORVU2Hr1G092530.3 , HORVU2Hr1G092530.2 , HORVU2Hr1G092530.1 , HORVU6Hr1G061220.10 , HORVU6Hr1G061220.13 , HORVU6Hr1G061220.12 , HORVU2Hr1G092530.15 , HORVU2Hr1G092530.11 , HORVU2Hr1G092540.1
Wheat TraesCS6D02G222000 , TraesCS2B02G406900 , TraesCS2A02G388900 , TraesCS6B02G284900 , TraesCS2D02G386700 , TraesCS6A02G239600 , TraesCS6A02G239600 , TraesCS6A02G239600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G360600 expressed protein -
2 Sobic.001G455900 "qGL3-2/qLGY3(Ortholog in rice:Yu et al., 2018/Liu et al., 2018)"(PubMedID : 31659846)@determinacy of the spikelet meristem and determining the identity of lemmas and paleas(PubMedID : 15208396)@OsMADS1 - MADS-box family gene with MIKCc type-box, expressed -
3 Sobic.003G046400 transcriptional corepressor LEUNIG, putative, expressed -
4 Sobic.003G010700 plant-specific domain TIGR01568 family protein, expressed -
5 Sobic.010G070900 keratin, type I cytoskeletal 9, putative, expressed -
6 Sobic.007G147200 OsSub56 - Putative Subtilisin homologue, expressed -
7 Sobic.007G033700 OsFBX309 - F-box domain containing protein, expressed -
8 Sobic.006G107500 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
9 Sobic.001G101900 SCP-like extracellular protein, expressed -
10 Sobic.010G247000 expressed protein -
11 Sobic.003G019900 GDSL-like lipase/acylhydrolase, putative, expressed -
12 Sobic.010G077000 "Upregulated in leave and stem in response to drouht stress, not expredded in roots"(PubMedID : 31615416)@receptor-like protein kinase 5 precursor, putative, expressed -
13 Sobic.003G085900 Glycosyl hydrolase. predicted target of sbi-miR-5568 and sbi-miR-6220 expressed in the stems of sweet sorghum(PubMedID : 26117170)@glycosyl hydrolase, family 31, putative, expressed K15925: alpha-D-xyloside xylohydrolase
14 Sobic.002G430700 glycosyltransferase family 43 protein, putative, expressed -
15 Sobic.001G137600 ankyrin, putative, expressed -
16 Sobic.008G138000 XH domain containing protein, expressed -
17 Sobic.001G143400 Trihelix Family(PubMedID : 24864043)@transcription factor, putative, expressed -
18 Sobic.003G002000 expressed protein -
19 Sobic.010G276600 PAZ domain containing protein, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
20 Sobic.003G338700 LTPL16 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -


Gene co-expression network
sample Sobic006G163300 Sobic006G163300 Sobic002G360600 Sobic002G360600 Sobic006G163300--Sobic002G360600 Sobic001G455900 Sobic001G455900 Sobic006G163300--Sobic001G455900 Sobic003G046400 Sobic003G046400 Sobic006G163300--Sobic003G046400 Sobic003G010700 Sobic003G010700 Sobic006G163300--Sobic003G010700 Sobic010G070900 Sobic010G070900 Sobic006G163300--Sobic010G070900 Sobic007G147200 Sobic007G147200 Sobic006G163300--Sobic007G147200 Sobic007G033700 Sobic007G033700 Sobic006G163300--Sobic007G033700 Sobic006G107500 Sobic006G107500 Sobic006G163300--Sobic006G107500 Sobic001G101900 Sobic001G101900 Sobic006G163300--Sobic001G101900 Sobic002G360600--Sobic006G107500 Sobic002G360600--Sobic006G163300 Sobic010G087600 Sobic010G087600 Sobic002G360600--Sobic010G087600 Sobic002G360600--Sobic010G070900 Sobic002G360600--Sobic003G010700 Sobic003G085900 Sobic003G085900 Sobic002G360600--Sobic003G085900 Sobic009G146700 Sobic009G146700 Sobic002G360600--Sobic009G146700 Sobic003G338700 Sobic003G338700 Sobic002G360600--Sobic003G338700 Sobic002G360600--Sobic003G046400 Sobic001G455900--Sobic003G046400 Sobic001G455900--Sobic006G163300 Sobic001G455900--Sobic007G033700 Sobic009G243000 Sobic009G243000 Sobic001G455900--Sobic009G243000 Sobic010G247000 Sobic010G247000 Sobic001G455900--Sobic010G247000 Sobic006G271600 Sobic006G271600 Sobic001G455900--Sobic006G271600 Sobic001G071600 Sobic001G071600 Sobic001G455900--Sobic001G071600 Sobic001G137600 Sobic001G137600 Sobic001G455900--Sobic001G137600 Sobic001G455900--Sobic010G070900 Sobic003G046400--Sobic001G455900 Sobic003G046400--Sobic001G071600 Sobic003G046400--Sobic007G033700 Sobic001G106500 Sobic001G106500 Sobic003G046400--Sobic001G106500 Sobic003G046400--Sobic006G271600 Sobic010G183800 Sobic010G183800 Sobic003G046400--Sobic010G183800 Sobic003G046400--Sobic006G163300 Sobic003G046400--Sobic010G070900 Sobic009G048300 Sobic009G048300 Sobic003G046400--Sobic009G048300 Sobic002G363300 Sobic002G363300 Sobic003G010700--Sobic002G363300 Sobic006G273600 Sobic006G273600 Sobic003G010700--Sobic006G273600 Sobic007G170100 Sobic007G170100 Sobic003G010700--Sobic007G170100 Sobic003G010700--Sobic006G163300 Sobic005G199700 Sobic005G199700 Sobic003G010700--Sobic005G199700 Sobic003G010700--Sobic002G360600 Sobic003G010700--Sobic009G146700 Sobic003G010700--Sobic003G338700 Sobic010G276600 Sobic010G276600 Sobic003G010700--Sobic010G276600 Sobic010G070900--Sobic007G147200 Sobic010G070900--Sobic002G360600 Sobic010G070900--Sobic003G046400 Sobic010G070900--Sobic006G163300 Sobic010G070900--Sobic006G107500 Sobic002G426000 Sobic002G426000 Sobic010G070900--Sobic002G426000 Sobic010G070900--Sobic007G033700 Sobic010G168700 Sobic010G168700 Sobic010G070900--Sobic010G168700 Sobic001G143400 Sobic001G143400 Sobic010G070900--Sobic001G143400 Sobic007G147200--Sobic010G070900 Sobic010G255000 Sobic010G255000 Sobic007G147200--Sobic010G255000 Sobic004G003700 Sobic004G003700 Sobic007G147200--Sobic004G003700 Sobic007G147200--Sobic003G046400 Sobic007G147200--Sobic006G163300 Sobic007G147200--Sobic001G143400 Sobic003G019900 Sobic003G019900 Sobic007G147200--Sobic003G019900 Sobic007G147200--Sobic006G107500 Sobic001G101700 Sobic001G101700 Sobic007G147200--Sobic001G101700 Sobic007G033700--Sobic003G046400 Sobic007G033700--Sobic009G243000 Sobic007G033700--Sobic001G137600 Sobic007G033700--Sobic001G455900 Sobic007G033700--Sobic006G163300 Sobic007G033700--Sobic010G070900 Sobic007G033700--Sobic006G271600 Sobic007G033700--Sobic001G071600 Sobic004G237000 Sobic004G237000 Sobic007G033700--Sobic004G237000 Sobic006G107500--Sobic002G360600 Sobic006G107500--Sobic010G070900 Sobic006G107500--Sobic010G087600 Sobic006G107500--Sobic003G085900 Sobic006G107500--Sobic006G163300 Sobic006G107500--Sobic009G146700 Sobic006G107500--Sobic007G147200 Sobic002G430700 Sobic002G430700 Sobic006G107500--Sobic002G430700 Sobic006G107500--Sobic003G338700 Sobic001G101900--Sobic006G163300 Sobic001G101900--Sobic007G147200 Sobic006G274200 Sobic006G274200 Sobic001G101900--Sobic006G274200 Sobic001G101900--Sobic010G070900 Sobic001G101900--Sobic003G019900 Sobic001G101900--Sobic002G360600 Sobic001G101900--Sobic004G003700 Sobic009G087700 Sobic009G087700 Sobic001G101900--Sobic009G087700 Sobic003G002000 Sobic003G002000 Sobic001G101900--Sobic003G002000
Octagon: transcription factors


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