Gene annotation
Transcriptome id Sobic.001G101900.1
Synonym Sb01g009100
Functional annotation SCP-like extracellular protein, expressed
UniProt A0A1B6QI91
Pfam PF00188
Panther DB PTHR10334 PTHR10334:SF225
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G66590 : CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
RAP-DB (Rice) LOC_Os01g28500.1 : SCP-like extracellular protein, expressed
MaizeGDB (Corn) Zm00025a008028
Brachypodium KQK13362
Barley HORVU4Hr1G010540.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G163300 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
2 Sobic.007G147200 OsSub56 - Putative Subtilisin homologue, expressed -
3 Sobic.006G274200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Eukaryotic aspartyl protease domain containing protein, expressed -
4 Sobic.010G070900 keratin, type I cytoskeletal 9, putative, expressed -
5 Sobic.003G019900 GDSL-like lipase/acylhydrolase, putative, expressed -
6 Sobic.002G360600 expressed protein -
7 Sobic.004G003700 Trihelix Family(PubMedID : 24864043)@expressed protein -
8 Sobic.009G087700 proline-rich family protein, putative, expressed -
9 Sobic.003G002000 expressed protein -
10 Sobic.001G101700 OsGIF1(Ortholog in rice:He et al. (2017))(PubMedID : 31659832)@GRF-interacting factor 1, putative, expressed -
11 Sobic.007G201900 expressed protein -
12 Sobic.003G010700 plant-specific domain TIGR01568 family protein, expressed -
13 Sobic.006G272800 Most C2 domain protein(PubMedID : 29491869)@anthranilate phosphoribosyltransferase, putative, expressed -
14 Sobic.001G143400 Trihelix Family(PubMedID : 24864043)@transcription factor, putative, expressed -
15 Sobic.007G209200 CUP-SHAPED COTYLEDON3, putative, expressed -
16 Sobic.001G464800 cyclin, putative, expressed K18811: cyclin D5, plant
17 Sobic.006G107500 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
18 Sobic.010G255000 uncharacterized protein At4g06744 precursor, putative, expressed -
19 Sobic.004G267600 OsFBT4 - F-box and tubby domain containing protein, expressed -
20 Sobic.010G269700 expressed protein -


Gene co-expression network
sample Sobic001G101900 Sobic001G101900 Sobic006G163300 Sobic006G163300 Sobic001G101900--Sobic006G163300 Sobic007G147200 Sobic007G147200 Sobic001G101900--Sobic007G147200 Sobic006G274200 Sobic006G274200 Sobic001G101900--Sobic006G274200 Sobic010G070900 Sobic010G070900 Sobic001G101900--Sobic010G070900 Sobic003G019900 Sobic003G019900 Sobic001G101900--Sobic003G019900 Sobic002G360600 Sobic002G360600 Sobic001G101900--Sobic002G360600 Sobic004G003700 Sobic004G003700 Sobic001G101900--Sobic004G003700 Sobic009G087700 Sobic009G087700 Sobic001G101900--Sobic009G087700 Sobic003G002000 Sobic003G002000 Sobic001G101900--Sobic003G002000 Sobic006G163300--Sobic002G360600 Sobic001G455900 Sobic001G455900 Sobic006G163300--Sobic001G455900 Sobic003G046400 Sobic003G046400 Sobic006G163300--Sobic003G046400 Sobic003G010700 Sobic003G010700 Sobic006G163300--Sobic003G010700 Sobic006G163300--Sobic010G070900 Sobic006G163300--Sobic007G147200 Sobic007G033700 Sobic007G033700 Sobic006G163300--Sobic007G033700 Sobic006G107500 Sobic006G107500 Sobic006G163300--Sobic006G107500 Sobic006G163300--Sobic001G101900 Sobic007G147200--Sobic010G070900 Sobic010G255000 Sobic010G255000 Sobic007G147200--Sobic010G255000 Sobic007G147200--Sobic004G003700 Sobic007G147200--Sobic003G046400 Sobic007G147200--Sobic006G163300 Sobic001G143400 Sobic001G143400 Sobic007G147200--Sobic001G143400 Sobic007G147200--Sobic003G019900 Sobic007G147200--Sobic006G107500 Sobic001G101700 Sobic001G101700 Sobic007G147200--Sobic001G101700 Sobic006G274200--Sobic003G019900 Sobic010G269700 Sobic010G269700 Sobic006G274200--Sobic010G269700 Sobic006G274200--Sobic003G002000 Sobic007G209200 Sobic007G209200 Sobic006G274200--Sobic007G209200 Sobic006G274200--Sobic001G101900 Sobic008G151600 Sobic008G151600 Sobic006G274200--Sobic008G151600 Sobic009G146700 Sobic009G146700 Sobic006G274200--Sobic009G146700 Sobic003G338700 Sobic003G338700 Sobic006G274200--Sobic003G338700 Sobic001G493900 Sobic001G493900 Sobic006G274200--Sobic001G493900 Sobic010G070900--Sobic007G147200 Sobic010G070900--Sobic002G360600 Sobic010G070900--Sobic003G046400 Sobic010G070900--Sobic006G163300 Sobic010G070900--Sobic006G107500 Sobic002G426000 Sobic002G426000 Sobic010G070900--Sobic002G426000 Sobic010G070900--Sobic007G033700 Sobic010G168700 Sobic010G168700 Sobic010G070900--Sobic010G168700 Sobic010G070900--Sobic001G143400 Sobic003G019900--Sobic006G274200 Sobic003G019900--Sobic001G493900 Sobic003G019900--Sobic003G338700 Sobic003G019900--Sobic008G151600 Sobic003G019900--Sobic007G147200 Sobic010G014500 Sobic010G014500 Sobic003G019900--Sobic010G014500 Sobic003G019900--Sobic006G163300 Sobic001G074000 Sobic001G074000 Sobic003G019900--Sobic001G074000 Sobic004G267600 Sobic004G267600 Sobic003G019900--Sobic004G267600 Sobic002G360600--Sobic006G107500 Sobic002G360600--Sobic006G163300 Sobic010G087600 Sobic010G087600 Sobic002G360600--Sobic010G087600 Sobic002G360600--Sobic010G070900 Sobic002G360600--Sobic003G010700 Sobic003G085900 Sobic003G085900 Sobic002G360600--Sobic003G085900 Sobic002G360600--Sobic009G146700 Sobic002G360600--Sobic003G338700 Sobic002G360600--Sobic003G046400 Sobic004G003700--Sobic001G143400 Sobic004G003700--Sobic007G209200 Sobic004G003700--Sobic010G168700 Sobic004G003700--Sobic007G147200 Sobic006G221800 Sobic006G221800 Sobic004G003700--Sobic006G221800 Sobic009G047500 Sobic009G047500 Sobic004G003700--Sobic009G047500 Sobic004G003700--Sobic001G101700 Sobic005G168400 Sobic005G168400 Sobic004G003700--Sobic005G168400 Sobic008G138000 Sobic008G138000 Sobic004G003700--Sobic008G138000 Sobic009G087700--Sobic006G221800 Sobic009G087700--Sobic004G003700 Sobic009G087700--Sobic001G101900 Sobic009G087700--Sobic007G147200 Sobic008G125700 Sobic008G125700 Sobic009G087700--Sobic008G125700 Sobic009G087700--Sobic001G101700 Sobic002G360500 Sobic002G360500 Sobic009G087700--Sobic002G360500 Sobic001G496400 Sobic001G496400 Sobic009G087700--Sobic001G496400 Sobic001G393200 Sobic001G393200 Sobic009G087700--Sobic001G393200 Sobic003G002000--Sobic006G274200 Sobic003G002000--Sobic007G209200 Sobic003G002000--Sobic006G163300 Sobic003G002000--Sobic003G019900 Sobic003G002000--Sobic003G010700 Sobic003G002000--Sobic001G101900 Sobic003G002000--Sobic008G138000 Sobic003G002000--Sobic010G269700 Sobic003G002000--Sobic007G147200
Octagon: transcription factors


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