Gene annotation
Transcriptome id Sobic.007G201900.1
Synonym Sb07g026930
Functional annotation expressed protein
UniProt C5YIA0
Pfam PF07891
Panther DB PTHR10759 PTHR10759:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006412; translation GO:0005840ribosome GO:0005622intracellular GO:0003735structural constituent of ribosome


Orthologs (automatic annotation)
TAIR AT3G20260 : Protein of unknown function (DUF1666)
RAP-DB (Rice) LOC_Os08g40820.1 : expressed protein
MaizeGDB (Corn) Zm00025a030350 , Zm00025a005164
Brachypodium KQJ99012
Barley HORVU7Hr1G052270.1 , HORVU7Hr1G052270.3 , HORVU7Hr1G052270.2 , HORVU7Hr1G052270.5 , HORVU7Hr1G052270.6
Wheat TraesCS7A02G252900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G057800 kelch repeat-containing protein, putative, expressed -
2 Sobic.001G101700 OsGIF1(Ortholog in rice:He et al. (2017))(PubMedID : 31659832)@GRF-interacting factor 1, putative, expressed -
3 Sobic.010G255000 uncharacterized protein At4g06744 precursor, putative, expressed -
4 Sobic.002G112000 protein binding protein, putative, expressed -
5 Sobic.002G279400 DUF630/DUF632 domains containing protein, putative, expressed -
6 Sobic.001G101900 SCP-like extracellular protein, expressed -
7 Sobic.003G244000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@aldose 1-epimerase, putative, expressed K01792: glucose-6-phosphate 1-epimerase
8 Sobic.009G143200 DUF630/DUF632 domains containing protein, putative, expressed -
9 Sobic.007G147200 OsSub56 - Putative Subtilisin homologue, expressed -
10 Sobic.001G054700 seed specific protein Bn15D14A, putative, expressed -
11 Sobic.007G162400 ABC-2 type transporter domain containing protein, expressed -
12 Sobic.003G250100 homeobox domain containing protein, expressed -
13 Sobic.007G209200 CUP-SHAPED COTYLEDON3, putative, expressed -
14 Sobic.002G196500 linker histone H1 and H5 family protein, expressed -
15 Sobic.003G282500 keratin, type I cytoskeletal 9, putative, expressed -
16 Sobic.006G272800 Most C2 domain protein(PubMedID : 29491869)@anthranilate phosphoribosyltransferase, putative, expressed -
17 Sobic.008G151600 PMR5, putative, expressed -
18 Sobic.002G050700 tesmin/TSO1-like CXC domain containing protein, expressed -
19 Sobic.008G070700 leafbladeless1, putative, expressed -
20 Sobic.006G221300 expressed protein -


Gene co-expression network
sample Sobic007G201900 Sobic007G201900 Sobic009G057800 Sobic009G057800 Sobic007G201900--Sobic009G057800 Sobic001G101700 Sobic001G101700 Sobic007G201900--Sobic001G101700 Sobic010G255000 Sobic010G255000 Sobic007G201900--Sobic010G255000 Sobic002G112000 Sobic002G112000 Sobic007G201900--Sobic002G112000 Sobic002G279400 Sobic002G279400 Sobic007G201900--Sobic002G279400 Sobic001G101900 Sobic001G101900 Sobic007G201900--Sobic001G101900 Sobic003G244000 Sobic003G244000 Sobic007G201900--Sobic003G244000 Sobic009G143200 Sobic009G143200 Sobic007G201900--Sobic009G143200 Sobic007G147200 Sobic007G147200 Sobic007G201900--Sobic007G147200 Sobic009G057800--Sobic007G201900 Sobic009G057800--Sobic002G112000 Sobic009G057800--Sobic001G101700 Sobic009G057800--Sobic002G279400 Sobic008G151600 Sobic008G151600 Sobic009G057800--Sobic008G151600 Sobic007G209200 Sobic007G209200 Sobic009G057800--Sobic007G209200 Sobic009G057800--Sobic010G255000 Sobic009G057800--Sobic009G143200 Sobic003G282500 Sobic003G282500 Sobic009G057800--Sobic003G282500 Sobic006G221800 Sobic006G221800 Sobic001G101700--Sobic006G221800 Sobic001G101700--Sobic010G255000 Sobic004G003700 Sobic004G003700 Sobic001G101700--Sobic004G003700 Sobic001G101700--Sobic007G147200 Sobic001G101700--Sobic007G201900 Sobic001G101700--Sobic007G209200 Sobic001G101700--Sobic008G151600 Sobic001G101700--Sobic009G057800 Sobic001G143400 Sobic001G143400 Sobic001G101700--Sobic001G143400 Sobic010G255000--Sobic007G147200 Sobic010G255000--Sobic001G101700 Sobic010G255000--Sobic007G201900 Sobic003G046400 Sobic003G046400 Sobic010G255000--Sobic003G046400 Sobic002G255600 Sobic002G255600 Sobic010G255000--Sobic002G255600 Sobic007G137101 Sobic007G137101 Sobic010G255000--Sobic007G137101 Sobic001G106500 Sobic001G106500 Sobic010G255000--Sobic001G106500 Sobic007G121200 Sobic007G121200 Sobic010G255000--Sobic007G121200 Sobic010G220800 Sobic010G220800 Sobic010G255000--Sobic010G220800 Sobic002G112000--Sobic009G057800 Sobic002G112000--Sobic007G201900 Sobic002G317700 Sobic002G317700 Sobic002G112000--Sobic002G317700 Sobic008G070700 Sobic008G070700 Sobic002G112000--Sobic008G070700 Sobic010G222800 Sobic010G222800 Sobic002G112000--Sobic010G222800 Sobic003G129500 Sobic003G129500 Sobic002G112000--Sobic003G129500 Sobic006G272800 Sobic006G272800 Sobic002G112000--Sobic006G272800 Sobic004G190500 Sobic004G190500 Sobic002G112000--Sobic004G190500 Sobic009G002200 Sobic009G002200 Sobic002G112000--Sobic009G002200 Sobic002G279400--Sobic007G201900 Sobic002G279400--Sobic009G057800 Sobic009G127800 Sobic009G127800 Sobic002G279400--Sobic009G127800 Sobic006G221300 Sobic006G221300 Sobic002G279400--Sobic006G221300 Sobic005G153000 Sobic005G153000 Sobic002G279400--Sobic005G153000 Sobic002G279400--Sobic001G101700 Sobic009G188500 Sobic009G188500 Sobic002G279400--Sobic009G188500 Sobic001G054700 Sobic001G054700 Sobic002G279400--Sobic001G054700 Sobic009G208300 Sobic009G208300 Sobic002G279400--Sobic009G208300 Sobic006G163300 Sobic006G163300 Sobic001G101900--Sobic006G163300 Sobic001G101900--Sobic007G147200 Sobic006G274200 Sobic006G274200 Sobic001G101900--Sobic006G274200 Sobic010G070900 Sobic010G070900 Sobic001G101900--Sobic010G070900 Sobic003G019900 Sobic003G019900 Sobic001G101900--Sobic003G019900 Sobic002G360600 Sobic002G360600 Sobic001G101900--Sobic002G360600 Sobic001G101900--Sobic004G003700 Sobic009G087700 Sobic009G087700 Sobic001G101900--Sobic009G087700 Sobic003G002000 Sobic003G002000 Sobic001G101900--Sobic003G002000 Sobic001G238900 Sobic001G238900 Sobic003G244000--Sobic001G238900 Sobic003G244000--Sobic001G054700 Sobic003G244000--Sobic007G201900 Sobic002G230800 Sobic002G230800 Sobic003G244000--Sobic002G230800 Sobic002G351100 Sobic002G351100 Sobic003G244000--Sobic002G351100 Sobic001G118800 Sobic001G118800 Sobic003G244000--Sobic001G118800 Sobic003G244000--Sobic009G143200 Sobic005G157300 Sobic005G157300 Sobic003G244000--Sobic005G157300 Sobic004G317000 Sobic004G317000 Sobic003G244000--Sobic004G317000 Sobic009G143200--Sobic005G157300 Sobic009G143200--Sobic004G317000 Sobic009G143200--Sobic001G054700 Sobic003G055600 Sobic003G055600 Sobic009G143200--Sobic003G055600 Sobic009G143200--Sobic006G221300 Sobic009G077300 Sobic009G077300 Sobic009G143200--Sobic009G077300 Sobic004G108400 Sobic004G108400 Sobic009G143200--Sobic004G108400 Sobic004G052200 Sobic004G052200 Sobic009G143200--Sobic004G052200 Sobic007G187700 Sobic007G187700 Sobic009G143200--Sobic007G187700 Sobic007G147200--Sobic010G070900 Sobic007G147200--Sobic010G255000 Sobic007G147200--Sobic004G003700 Sobic007G147200--Sobic003G046400 Sobic007G147200--Sobic006G163300 Sobic007G147200--Sobic001G143400 Sobic007G147200--Sobic003G019900 Sobic006G107500 Sobic006G107500 Sobic007G147200--Sobic006G107500 Sobic007G147200--Sobic001G101700
Octagon: transcription factors


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