Gene annotation
Transcriptome id Sobic.007G209200.1
Synonym Sb07g027650, NAC368, CUC3, ANAC031
Functional annotation CUP-SHAPED COTYLEDON3, putative, expressed
UniProt C5YIR1
Pfam PF02365
Panther DB PTHR31744 PTHR31744:SF17
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT1G76420 : NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
RAP-DB (Rice) LOC_Os08g40030.1 : CUP-SHAPED COTYLEDON3, putative, expressed
MaizeGDB (Corn) Zm00025a049194 , Zm00025a002284 , Zm00025a025662 , Zm00025a031741 , Zm00025a022545 , Zm00025a014318 , Zm00025a032846 , Zm00025a040616 , Zm00025a035399 , Zm00025a005111 , Zm00025a020814 , Zm00025a052463 , Zm00025a010699 , Zm00025a050155 , Zm00025a054832 , Zm00025a056511 , Zm00025a011264
Brachypodium KQK00031 , KQK00032 , KQJ95318 , PNT68893 , KQJ82981 , KQJ82980 , KQK19730 , KQK20102 , KQK20101 , KQK21867 , KQK00033 , KQJ98938 , PNT76596 , KQK15122
Barley HORVU7Hr1G070780.9 , HORVU7Hr1G070780.8 , HORVU7Hr1G070780.5 , HORVU7Hr1G070780.4 , HORVU7Hr1G070780.7 , HORVU7Hr1G070780.6 , HORVU7Hr1G070780.1 , HORVU7Hr1G070780.3 , HORVU4Hr1G051360.5 , HORVU4Hr1G051360.4 , HORVU4Hr1G051360.1 , HORVU4Hr1G051360.3 , HORVU7Hr1G075550.1 , HORVU7Hr1G075550.7 , HORVU7Hr1G075550.6 , HORVU7Hr1G075550.5 , HORVU2Hr1G017370.6 , HORVU2Hr1G017370.7 , HORVU2Hr1G017370.4 , HORVU2Hr1G017370.5 , HORVU2Hr1G017370.2 , HORVU2Hr1G017370.3 , HORVU2Hr1G017370.1 , HORVU2Hr1G017350.8 , HORVU2Hr1G017350.9 , HORVU0Hr1G017490.7 , HORVU2Hr1G017350.1 , HORVU2Hr1G017350.2 , HORVU2Hr1G017350.3 , HORVU2Hr1G017350.4 , HORVU2Hr1G017350.5 , HORVU2Hr1G017350.6 , HORVU2Hr1G017350.7 , HORVU5Hr1G099390.3 , HORVU5Hr1G099390.2 , HORVU2Hr1G080460.14 , HORVU2Hr1G080460.15 , HORVU2Hr1G080460.17 , HORVU2Hr1G080460.10 , HORVU2Hr1G080460.11 , HORVU2Hr1G080460.12 , HORVU2Hr1G080460.13 , HORVU2Hr1G080460.18 , HORVU2Hr1G080460.19 , HORVU2Hr1G017360.1 , HORVU2Hr1G017360.2 , HORVU7Hr1G012730.2 , HORVU7Hr1G012730.3 , HORVU7Hr1G012730.4 , HORVU7Hr1G012730.7 , HORVU7Hr1G012730.8 , HORVU7Hr1G012730.9 , HORVU0Hr1G017490.4 , HORVU0Hr1G017490.6 , HORVU7Hr1G072670.9 , HORVU7Hr1G072670.8 , HORVU2Hr1G017400.1 , HORVU2Hr1G017400.2 , HORVU2Hr1G017400.3 , HORVU2Hr1G017400.4 , HORVU2Hr1G017400.5 , HORVU2Hr1G017400.6 , HORVU2Hr1G017400.7 , HORVU2Hr1G080460.8 , HORVU2Hr1G080460.6 , HORVU2Hr1G080460.7 , HORVU2Hr1G080460.4 , HORVU2Hr1G080460.5 , HORVU2Hr1G080460.2 , HORVU2Hr1G080460.3 , HORVU2Hr1G080460.1 , HORVU7Hr1G082420.3 , HORVU7Hr1G082420.2 , HORVU7Hr1G082420.4 , HORVU1Hr1G049840.12 , HORVU2Hr1G103930.2 , HORVU2Hr1G103930.3 , HORVU2Hr1G103930.1 , HORVU2Hr1G103930.6 , HORVU2Hr1G103930.7 , HORVU2Hr1G103930.4 , HORVU2Hr1G103930.5 , HORVU2Hr1G103930.8 , HORVU2Hr1G103930.9 , HORVU2Hr1G080460.21 , HORVU2Hr1G080460.20 , HORVU7Hr1G012780.7 , HORVU7Hr1G050940.1 , HORVU7Hr1G050940.2 , HORVU2Hr1G017380.1 , HORVU7Hr1G072670.3 , HORVU7Hr1G072670.2 , HORVU7Hr1G072670.1 , HORVU7Hr1G072670.7 , HORVU7Hr1G072670.6 , HORVU7Hr1G072670.5 , HORVU7Hr1G072670.4 , HORVU7Hr1G070780.10 , HORVU7Hr1G072670.11 , HORVU7Hr1G072670.10 , HORVU7Hr1G070780.2 , HORVU0Hr1G017490.8 , HORVU0Hr1G017490.1 , HORVU0Hr1G017490.2 , HORVU0Hr1G017490.5 , HORVU7Hr1G012780.9 , HORVU7Hr1G012780.8 , HORVU7Hr1G012780.5 , HORVU7Hr1G012780.4 , HORVU7Hr1G012780.6 , HORVU7Hr1G012780.1 , HORVU7Hr1G012780.3 , HORVU7Hr1G012780.2 , HORVU1Hr1G049840.8 , HORVU1Hr1G049840.9 , HORVU1Hr1G049840.1 , HORVU1Hr1G049840.2 , HORVU1Hr1G049840.3 , HORVU1Hr1G049840.4 , HORVU1Hr1G049840.6 , HORVU1Hr1G049840.7 , HORVU5Hr1G045650.8 , HORVU5Hr1G045650.5 , HORVU5Hr1G045650.4 , HORVU5Hr1G045650.7 , HORVU5Hr1G045650.6 , HORVU5Hr1G045650.1 , HORVU5Hr1G045650.3 , HORVU2Hr1G089210.6 , HORVU2Hr1G089210.4 , HORVU2Hr1G089210.5 , HORVU2Hr1G089210.2 , HORVU2Hr1G089210.3 , HORVU2Hr1G089210.1 , HORVU1Hr1G049840.13 , HORVU1Hr1G049840.10 , HORVU7Hr1G122680.1 , HORVU7Hr1G122680.2 , HORVU7Hr1G122680.3
Wheat TraesCS6D02G362800 , TraesCS2B02G343600 , TraesCS7D02G062100 , TraesCS7B02G489500 , TraesCS7B02G489500 , TraesCS5A02G143200 , TraesCS4A02G421200 , TraesCS7D02G246100 , TraesCS7B02G205600 , TraesCS7A02G068300 , TraesCS2D02G100600 , TraesCS4D02G176000 , TraesCS7D02G342300 , TraesCS2B02G118300 , TraesCS2D02G100700 , TraesCS2D02G100700 , TraesCS5A02G411700 , TraesCS2D02G100800 , TraesCS7D02G062400 , TraesCS7A02G569300 , TraesCS7B02G246300 , TraesCS7D02G302000 , TraesCS6D02G362900 , TraesCS5D02G148800 , TraesCS7A02G299600 , TraesCS7B02G143900 , TraesCS2A02G101000 , TraesCS2A02G101000 , TraesCS7A02G334800 , TraesCS7A02G247600 , TraesCS2B02G118500 , TraesCS5D02G421000 , TraesCS5D02G421000 , TraesCS7A02G305200 , TraesCS7A02G299600 , TraesCS7A02G299600 , TraesCS7A02G299600 , TraesCS4A02G421100 , TraesCS4A02G130600 , TraesCS2B02G118200 , TraesCS1A02G190100 , TraesCS6A02G378500 , TraesCS2A02G382400 , TraesCS2A02G382400 , TraesCS2A02G101100 , TraesCS2D02G324700 , TraesCS7B02G094000 , TraesCS5A02G411800 , TraesCS2B02G118400 , TraesCS2A02G101200 , TraesCS2D02G100900 , TraesCS7B02G187600 , TraesCS7B02G187600 , TraesCS7B02G187600 , TraesCS7B02G187600 , TraesCS7B02G187600 , TraesCS7D02G062300 , TraesCS4B02G174000 , TraesCS2A02G338300 , TraesCS7A02G068000 , TraesCS5D02G421100 , TraesCS2A02G101400 , TraesCS6B02G416300 , TraesCS5B02G142100 , TraesCS7D02G189900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G138000 XH domain containing protein, expressed -
2 Sobic.004G003700 Trihelix Family(PubMedID : 24864043)@expressed protein -
3 Sobic.003G002000 expressed protein -
4 Sobic.001G496400 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
5 Sobic.006G274200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Eukaryotic aspartyl protease domain containing protein, expressed -
6 Sobic.009G208300 TOO MANY MOUTHS precursor, putative, expressed -
7 Sobic.001G143400 Trihelix Family(PubMedID : 24864043)@transcription factor, putative, expressed -
8 Sobic.001G101700 OsGIF1(Ortholog in rice:He et al. (2017))(PubMedID : 31659832)@GRF-interacting factor 1, putative, expressed -
9 Sobic.007G147200 OsSub56 - Putative Subtilisin homologue, expressed -
10 Sobic.006G221800 OsFBX46 - F-box domain containing protein, expressed -
11 Sobic.008G151600 PMR5, putative, expressed -
12 Sobic.009G057800 kelch repeat-containing protein, putative, expressed -
13 Sobic.002G050700 tesmin/TSO1-like CXC domain containing protein, expressed -
14 Sobic.001G390400 expressed protein -
15 Sobic.006G163300 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
16 Sobic.008G114900 rhoGAP domain containing protein, expressed -
17 Sobic.003G019900 GDSL-like lipase/acylhydrolase, putative, expressed -
18 Sobic.001G101900 SCP-like extracellular protein, expressed -
19 Sobic.010G077000 "Upregulated in leave and stem in response to drouht stress, not expredded in roots"(PubMedID : 31615416)@receptor-like protein kinase 5 precursor, putative, expressed -
20 Sobic.003G338700 LTPL16 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -


Gene co-expression network
sample Sobic007G209200 Sobic007G209200 Sobic008G138000 Sobic008G138000 Sobic007G209200--Sobic008G138000 Sobic004G003700 Sobic004G003700 Sobic007G209200--Sobic004G003700 Sobic003G002000 Sobic003G002000 Sobic007G209200--Sobic003G002000 Sobic001G496400 Sobic001G496400 Sobic007G209200--Sobic001G496400 Sobic006G274200 Sobic006G274200 Sobic007G209200--Sobic006G274200 Sobic009G208300 Sobic009G208300 Sobic007G209200--Sobic009G208300 Sobic001G143400 Sobic001G143400 Sobic007G209200--Sobic001G143400 Sobic001G101700 Sobic001G101700 Sobic007G209200--Sobic001G101700 Sobic007G147200 Sobic007G147200 Sobic007G209200--Sobic007G147200 Sobic008G138000--Sobic007G209200 Sobic008G138000--Sobic004G003700 Sobic008G138000--Sobic001G143400 Sobic008G138000--Sobic007G147200 Sobic006G163300 Sobic006G163300 Sobic008G138000--Sobic006G163300 Sobic010G168700 Sobic010G168700 Sobic008G138000--Sobic010G168700 Sobic008G138000--Sobic001G101700 Sobic008G138000--Sobic003G002000 Sobic010G077000 Sobic010G077000 Sobic008G138000--Sobic010G077000 Sobic004G003700--Sobic001G143400 Sobic004G003700--Sobic007G209200 Sobic004G003700--Sobic010G168700 Sobic004G003700--Sobic007G147200 Sobic006G221800 Sobic006G221800 Sobic004G003700--Sobic006G221800 Sobic009G047500 Sobic009G047500 Sobic004G003700--Sobic009G047500 Sobic004G003700--Sobic001G101700 Sobic005G168400 Sobic005G168400 Sobic004G003700--Sobic005G168400 Sobic004G003700--Sobic008G138000 Sobic003G002000--Sobic006G274200 Sobic003G002000--Sobic007G209200 Sobic003G002000--Sobic006G163300 Sobic003G019900 Sobic003G019900 Sobic003G002000--Sobic003G019900 Sobic003G010700 Sobic003G010700 Sobic003G002000--Sobic003G010700 Sobic001G101900 Sobic001G101900 Sobic003G002000--Sobic001G101900 Sobic003G002000--Sobic008G138000 Sobic010G269700 Sobic010G269700 Sobic003G002000--Sobic010G269700 Sobic003G002000--Sobic007G147200 Sobic001G496400--Sobic006G221800 Sobic001G496400--Sobic007G209200 Sobic008G114900 Sobic008G114900 Sobic001G496400--Sobic008G114900 Sobic006G219500 Sobic006G219500 Sobic001G496400--Sobic006G219500 Sobic001G496400--Sobic004G003700 Sobic008G125700 Sobic008G125700 Sobic001G496400--Sobic008G125700 Sobic006G124400 Sobic006G124400 Sobic001G496400--Sobic006G124400 Sobic010G119300 Sobic010G119300 Sobic001G496400--Sobic010G119300 Sobic001G496400--Sobic001G101700 Sobic006G274200--Sobic003G019900 Sobic006G274200--Sobic010G269700 Sobic006G274200--Sobic003G002000 Sobic006G274200--Sobic007G209200 Sobic006G274200--Sobic001G101900 Sobic008G151600 Sobic008G151600 Sobic006G274200--Sobic008G151600 Sobic009G146700 Sobic009G146700 Sobic006G274200--Sobic009G146700 Sobic003G338700 Sobic003G338700 Sobic006G274200--Sobic003G338700 Sobic001G493900 Sobic001G493900 Sobic006G274200--Sobic001G493900 Sobic009G060800 Sobic009G060800 Sobic009G208300--Sobic009G060800 Sobic010G192500 Sobic010G192500 Sobic009G208300--Sobic010G192500 Sobic009G208300--Sobic007G209200 Sobic003G366000 Sobic003G366000 Sobic009G208300--Sobic003G366000 Sobic001G473500 Sobic001G473500 Sobic009G208300--Sobic001G473500 Sobic001G390400 Sobic001G390400 Sobic009G208300--Sobic001G390400 Sobic001G286700 Sobic001G286700 Sobic009G208300--Sobic001G286700 Sobic009G188500 Sobic009G188500 Sobic009G208300--Sobic009G188500 Sobic001G046400 Sobic001G046400 Sobic009G208300--Sobic001G046400 Sobic001G143400--Sobic004G003700 Sobic001G143400--Sobic010G168700 Sobic001G143400--Sobic005G168400 Sobic001G143400--Sobic007G147200 Sobic010G070900 Sobic010G070900 Sobic001G143400--Sobic010G070900 Sobic001G143400--Sobic009G047500 Sobic005G199700 Sobic005G199700 Sobic001G143400--Sobic005G199700 Sobic001G143400--Sobic008G138000 Sobic001G143400--Sobic007G209200 Sobic001G101700--Sobic006G221800 Sobic010G255000 Sobic010G255000 Sobic001G101700--Sobic010G255000 Sobic001G101700--Sobic004G003700 Sobic001G101700--Sobic007G147200 Sobic007G201900 Sobic007G201900 Sobic001G101700--Sobic007G201900 Sobic001G101700--Sobic007G209200 Sobic001G101700--Sobic008G151600 Sobic009G057800 Sobic009G057800 Sobic001G101700--Sobic009G057800 Sobic001G101700--Sobic001G143400 Sobic007G147200--Sobic010G070900 Sobic007G147200--Sobic010G255000 Sobic007G147200--Sobic004G003700 Sobic003G046400 Sobic003G046400 Sobic007G147200--Sobic003G046400 Sobic007G147200--Sobic006G163300 Sobic007G147200--Sobic001G143400 Sobic007G147200--Sobic003G019900 Sobic006G107500 Sobic006G107500 Sobic007G147200--Sobic006G107500 Sobic007G147200--Sobic001G101700
Octagon: transcription factors


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