Gene annotation
Transcriptome id Sobic.001G143400.1
Synonym Sb01g012490, SbTri16
Functional annotation Trihelix Family (PubMedID : 24864043)
transcription factor, putative, expressed
UniProt C5WQB7
Pfam PF13837
Panther DB PTHR33492:SF2 PTHR33492
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G35640 : Homeodomain-like superfamily protein
RAP-DB (Rice) LOC_Os03g46350.1 : transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a017159 , Zm00025a009192
Brachypodium KQK13856
Barley HORVU4Hr1G002970.1 , HORVU4Hr1G002970.2
Wheat TraesCS4D02G017200 , TraesCS4D02G017200 , TraesCS4B02G019200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G003700 Trihelix Family(PubMedID : 24864043)@expressed protein -
2 Sobic.010G168700 GDSL-like lipase/acylhydrolase, putative, expressed -
3 Sobic.005G168400 expressed protein -
4 Sobic.007G147200 OsSub56 - Putative Subtilisin homologue, expressed -
5 Sobic.010G070900 keratin, type I cytoskeletal 9, putative, expressed -
6 Sobic.009G047500 E3 ubiquitin-protein ligase SINA-like, putative, expressed K04506: E3 ubiquitin-protein ligase SIAH1
7 Sobic.005G199700 leucine-rich repeat family protein, putative, expressed -
8 Sobic.008G138000 XH domain containing protein, expressed -
9 Sobic.007G209200 CUP-SHAPED COTYLEDON3, putative, expressed -
10 Sobic.006G084201 - -
11 Sobic.003G010700 plant-specific domain TIGR01568 family protein, expressed -
12 Sobic.008G114900 rhoGAP domain containing protein, expressed -
13 Sobic.006G221800 OsFBX46 - F-box domain containing protein, expressed -
14 Sobic.006G163300 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
15 Sobic.008G125700 similar to F22D16.26 protein(PubMedID : 29862293)@CSLD4 - cellulose synthase-like family D, expressed K00770: 1,4-beta-D-xylan synthase
16 Sobic.010G247000 expressed protein -
17 Sobic.001G101700 OsGIF1(Ortholog in rice:He et al. (2017))(PubMedID : 31659832)@GRF-interacting factor 1, putative, expressed -
18 Sobic.010G077000 "Upregulated in leave and stem in response to drouht stress, not expredded in roots"(PubMedID : 31615416)@receptor-like protein kinase 5 precursor, putative, expressed -
19 Sobic.001G379900 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
20 Sobic.009G146700 universal stress protein domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G143400 Sobic001G143400 Sobic004G003700 Sobic004G003700 Sobic001G143400--Sobic004G003700 Sobic010G168700 Sobic010G168700 Sobic001G143400--Sobic010G168700 Sobic005G168400 Sobic005G168400 Sobic001G143400--Sobic005G168400 Sobic007G147200 Sobic007G147200 Sobic001G143400--Sobic007G147200 Sobic010G070900 Sobic010G070900 Sobic001G143400--Sobic010G070900 Sobic009G047500 Sobic009G047500 Sobic001G143400--Sobic009G047500 Sobic005G199700 Sobic005G199700 Sobic001G143400--Sobic005G199700 Sobic008G138000 Sobic008G138000 Sobic001G143400--Sobic008G138000 Sobic007G209200 Sobic007G209200 Sobic001G143400--Sobic007G209200 Sobic004G003700--Sobic001G143400 Sobic004G003700--Sobic007G209200 Sobic004G003700--Sobic010G168700 Sobic004G003700--Sobic007G147200 Sobic006G221800 Sobic006G221800 Sobic004G003700--Sobic006G221800 Sobic004G003700--Sobic009G047500 Sobic001G101700 Sobic001G101700 Sobic004G003700--Sobic001G101700 Sobic004G003700--Sobic005G168400 Sobic004G003700--Sobic008G138000 Sobic010G168700--Sobic009G047500 Sobic010G168700--Sobic001G143400 Sobic010G168700--Sobic005G168400 Sobic010G168700--Sobic004G003700 Sobic010G168700--Sobic010G070900 Sobic010G168700--Sobic005G199700 Sobic010G276600 Sobic010G276600 Sobic010G168700--Sobic010G276600 Sobic002G426000 Sobic002G426000 Sobic010G168700--Sobic002G426000 Sobic006G273600 Sobic006G273600 Sobic010G168700--Sobic006G273600 Sobic005G168400--Sobic010G168700 Sobic005G168400--Sobic001G143400 Sobic005G168400--Sobic004G003700 Sobic003G319900 Sobic003G319900 Sobic005G168400--Sobic003G319900 Sobic001G393200 Sobic001G393200 Sobic005G168400--Sobic001G393200 Sobic005G168400--Sobic009G047500 Sobic005G168400--Sobic005G199700 Sobic001G379900 Sobic001G379900 Sobic005G168400--Sobic001G379900 Sobic007G152300 Sobic007G152300 Sobic005G168400--Sobic007G152300 Sobic007G147200--Sobic010G070900 Sobic010G255000 Sobic010G255000 Sobic007G147200--Sobic010G255000 Sobic007G147200--Sobic004G003700 Sobic003G046400 Sobic003G046400 Sobic007G147200--Sobic003G046400 Sobic006G163300 Sobic006G163300 Sobic007G147200--Sobic006G163300 Sobic007G147200--Sobic001G143400 Sobic003G019900 Sobic003G019900 Sobic007G147200--Sobic003G019900 Sobic006G107500 Sobic006G107500 Sobic007G147200--Sobic006G107500 Sobic007G147200--Sobic001G101700 Sobic010G070900--Sobic007G147200 Sobic002G360600 Sobic002G360600 Sobic010G070900--Sobic002G360600 Sobic010G070900--Sobic003G046400 Sobic010G070900--Sobic006G163300 Sobic010G070900--Sobic006G107500 Sobic010G070900--Sobic002G426000 Sobic007G033700 Sobic007G033700 Sobic010G070900--Sobic007G033700 Sobic010G070900--Sobic010G168700 Sobic010G070900--Sobic001G143400 Sobic009G047500--Sobic010G168700 Sobic009G047500--Sobic004G003700 Sobic009G047500--Sobic001G143400 Sobic009G047500--Sobic001G393200 Sobic009G047500--Sobic005G168400 Sobic010G235300 Sobic010G235300 Sobic009G047500--Sobic010G235300 Sobic001G347201 Sobic001G347201 Sobic009G047500--Sobic001G347201 Sobic006G084201 Sobic006G084201 Sobic009G047500--Sobic006G084201 Sobic009G047500--Sobic006G273600 Sobic009G146700 Sobic009G146700 Sobic005G199700--Sobic009G146700 Sobic003G338700 Sobic003G338700 Sobic005G199700--Sobic003G338700 Sobic002G363300 Sobic002G363300 Sobic005G199700--Sobic002G363300 Sobic007G180200 Sobic007G180200 Sobic005G199700--Sobic007G180200 Sobic001G286700 Sobic001G286700 Sobic005G199700--Sobic001G286700 Sobic005G199700--Sobic006G273600 Sobic003G010700 Sobic003G010700 Sobic005G199700--Sobic003G010700 Sobic003G027100 Sobic003G027100 Sobic005G199700--Sobic003G027100 Sobic010G014700 Sobic010G014700 Sobic005G199700--Sobic010G014700 Sobic008G138000--Sobic007G209200 Sobic008G138000--Sobic004G003700 Sobic008G138000--Sobic001G143400 Sobic008G138000--Sobic007G147200 Sobic008G138000--Sobic006G163300 Sobic008G138000--Sobic010G168700 Sobic008G138000--Sobic001G101700 Sobic003G002000 Sobic003G002000 Sobic008G138000--Sobic003G002000 Sobic010G077000 Sobic010G077000 Sobic008G138000--Sobic010G077000 Sobic007G209200--Sobic008G138000 Sobic007G209200--Sobic004G003700 Sobic007G209200--Sobic003G002000 Sobic001G496400 Sobic001G496400 Sobic007G209200--Sobic001G496400 Sobic006G274200 Sobic006G274200 Sobic007G209200--Sobic006G274200 Sobic009G208300 Sobic009G208300 Sobic007G209200--Sobic009G208300 Sobic007G209200--Sobic001G143400 Sobic007G209200--Sobic001G101700 Sobic007G209200--Sobic007G147200
Octagon: transcription factors


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