Gene annotation
Transcriptome id Sobic.008G125700.1
Synonym Sb08g017750, CSLD5, SOS6, ATCSLD5
Functional annotation similar to F22D16.26 protein (PubMedID : 29862293)
CSLD4 - cellulose synthase-like family D, expressed
UniProt C5YPM3
Pfam PF13632 PF14570
Panther DB PTHR13301 PTHR13301:SF58
NCBI CDD -
KEGG Orthology K00770; 1,4-beta-D-xylan synthase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G02730 : cellulose synthase-like D5
RAP-DB (Rice) LOC_Os12g36890.1 : CSLD4 - cellulose synthase-like family D, expressed
MaizeGDB (Corn) Zm00025a054306 , Zm00025a050769 , Zm00025a006226 , Zm00025a050280 , Zm00025a055112 , Zm00025a030058 , Zm00025a003543
Brachypodium KQK02740 , KQK19741 , KQJ96300 , KQJ86377
Barley HORVU1Hr1G039250.10 , HORVU1Hr1G039250.11 , HORVU1Hr1G039250.12 , HORVU1Hr1G039250.13 , HORVU1Hr1G039250.14 , HORVU1Hr1G039250.15 , HORVU1Hr1G039250.16 , HORVU1Hr1G039250.17 , HORVU1Hr1G039250.18 , HORVU1Hr1G039250.19 , HORVU1Hr1G039250.2 , HORVU1Hr1G039250.3 , HORVU1Hr1G039250.6 , HORVU1Hr1G039250.4 , HORVU1Hr1G039250.5 , HORVU1Hr1G039250.8 , HORVU1Hr1G039250.9 , HORVU0Hr1G011610.1 , HORVU0Hr1G011610.2 , HORVU2Hr1G021410.1 , HORVU7Hr1G081850.1 , HORVU7Hr1G081850.3 , HORVU7Hr1G081850.2 , HORVU7Hr1G081850.5 , HORVU7Hr1G081850.4 , HORVU7Hr1G081850.7 , HORVU7Hr1G081850.6 , HORVU2Hr1G021450.2 , HORVU2Hr1G021450.3 , HORVU2Hr1G021450.6 , HORVU2Hr1G021450.4 , HORVU2Hr1G021450.5 , HORVU1Hr1G039250.25 , HORVU1Hr1G039250.24 , HORVU1Hr1G039250.27 , HORVU1Hr1G039250.26 , HORVU1Hr1G039250.21 , HORVU1Hr1G039250.20 , HORVU1Hr1G039250.23 , HORVU1Hr1G039250.22 , HORVU1Hr1G039250.29 , HORVU1Hr1G039250.28 , HORVU5Hr1G023640.2 , HORVU5Hr1G023640.3 , HORVU5Hr1G023640.8 , HORVU5Hr1G023640.9 , HORVU1Hr1G039250.30 , HORVU1Hr1G039250.31 , HORVU5Hr1G113750.1 , HORVU5Hr1G113750.2 , HORVU5Hr1G023640.6 , HORVU5Hr1G023640.7 , HORVU5Hr1G023640.4 , HORVU5Hr1G023640.5 , HORVU2Hr1G042240.4 , HORVU2Hr1G042240.5 , HORVU2Hr1G042240.1 , HORVU2Hr1G042240.2 , HORVU2Hr1G042240.3 , HORVU5Hr1G023640.1
Wheat TraesCS2A02G150100 , TraesCS2D02G126100 , TraesCS2A02G210000 , TraesCS5D02G102600 , TraesCS2D02G575900 , TraesCS7D02G339800 , TraesCS2B02G236200 , TraesCS2B02G236200 , TraesCS5B02G495200 , TraesCS7A02G033100 , TraesCS5A02G482200 , TraesCS7A02G331500 , TraesCS4A02G157400 , TraesCS4A02G456300 , TraesCS1A02G149300 , TraesCS1B02G167200 , TraesCS5A02G090500 , TraesCS2A02G122600 , TraesCS7B02G243200 , TraesCS2A02G565500 , TraesCS5D02G495800 , TraesCS1D02G146600 , TraesCS1D02G146600 , TraesCS7D02G029700 , TraesCS5B02G096200 , TraesCS1B02G185200 , TraesCS2B02G144900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G119300 expressed protein -
2 Sobic.008G114900 rhoGAP domain containing protein, expressed -
3 Sobic.003G102000 expressed protein -
4 Sobic.003G260700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
5 Sobic.004G198100 expressed protein -
6 Sobic.008G006800 inactive receptor kinase At2g26730 precursor, putative, expressed -
7 Sobic.002G313000 targeting protein-related, putative, expressed K16812: targeting protein for Xklp2
8 Sobic.004G339500 kinesin motor domain containing protein, putative, expressed -
9 Sobic.005G199700 leucine-rich repeat family protein, putative, expressed -
10 Sobic.010G129700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
11 Sobic.001G398400 expressed protein -
12 Sobic.006G219500 remorin family protein, putative, expressed -
13 Sobic.001G155700 expansin precursor, putative, expressed -
14 Sobic.001G496400 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
15 Sobic.004G257600 zinc finger family protein, putative, expressed K18932: palmitoyltransferase
16 Sobic.001G170800 "Transport protein(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659835)@transport protein-related, putative, expressed -
17 Sobic.009G146700 universal stress protein domain containing protein, putative, expressed -
18 Sobic.005G005700 inactive receptor kinase At2g26730 precursor, putative, expressed -
19 Sobic.001G140600 expressed protein -
20 Sobic.006G221800 OsFBX46 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic008G125700 Sobic008G125700 Sobic010G119300 Sobic010G119300 Sobic008G125700--Sobic010G119300 Sobic008G114900 Sobic008G114900 Sobic008G125700--Sobic008G114900 Sobic003G102000 Sobic003G102000 Sobic008G125700--Sobic003G102000 Sobic003G260700 Sobic003G260700 Sobic008G125700--Sobic003G260700 Sobic004G198100 Sobic004G198100 Sobic008G125700--Sobic004G198100 Sobic008G006800 Sobic008G006800 Sobic008G125700--Sobic008G006800 Sobic002G313000 Sobic002G313000 Sobic008G125700--Sobic002G313000 Sobic004G339500 Sobic004G339500 Sobic008G125700--Sobic004G339500 Sobic005G199700 Sobic005G199700 Sobic008G125700--Sobic005G199700 Sobic010G119300--Sobic008G125700 Sobic010G119300--Sobic008G006800 Sobic010G119300--Sobic003G260700 Sobic010G119300--Sobic004G198100 Sobic010G119300--Sobic003G102000 Sobic005G005700 Sobic005G005700 Sobic010G119300--Sobic005G005700 Sobic010G119300--Sobic004G339500 Sobic010G119300--Sobic008G114900 Sobic001G398400 Sobic001G398400 Sobic010G119300--Sobic001G398400 Sobic008G114900--Sobic008G125700 Sobic008G114900--Sobic002G313000 Sobic001G155700 Sobic001G155700 Sobic008G114900--Sobic001G155700 Sobic008G114900--Sobic010G119300 Sobic006G219500 Sobic006G219500 Sobic008G114900--Sobic006G219500 Sobic002G319300 Sobic002G319300 Sobic008G114900--Sobic002G319300 Sobic008G114900--Sobic003G260700 Sobic001G493900 Sobic001G493900 Sobic008G114900--Sobic001G493900 Sobic008G114900--Sobic008G006800 Sobic003G102000--Sobic008G125700 Sobic003G102000--Sobic003G260700 Sobic003G102000--Sobic010G119300 Sobic003G102000--Sobic004G339500 Sobic003G102000--Sobic008G114900 Sobic004G257600 Sobic004G257600 Sobic003G102000--Sobic004G257600 Sobic003G102000--Sobic004G198100 Sobic003G102000--Sobic008G006800 Sobic003G102000--Sobic002G313000 Sobic001G170800 Sobic001G170800 Sobic003G260700--Sobic001G170800 Sobic003G260700--Sobic004G257600 Sobic003G260700--Sobic004G339500 Sobic003G260700--Sobic001G398400 Sobic003G260700--Sobic004G198100 Sobic004G271300 Sobic004G271300 Sobic003G260700--Sobic004G271300 Sobic003G260700--Sobic008G006800 Sobic001G177900 Sobic001G177900 Sobic003G260700--Sobic001G177900 Sobic003G260700--Sobic002G313000 Sobic004G198100--Sobic003G260700 Sobic004G198100--Sobic010G119300 Sobic004G198100--Sobic001G398400 Sobic004G198100--Sobic008G125700 Sobic004G198100--Sobic004G257600 Sobic004G198100--Sobic001G170800 Sobic004G198100--Sobic004G339500 Sobic004G198100--Sobic002G313000 Sobic004G198100--Sobic004G271300 Sobic008G006800--Sobic005G005700 Sobic008G006800--Sobic010G119300 Sobic008G006800--Sobic003G260700 Sobic008G006800--Sobic001G398400 Sobic008G006800--Sobic004G339500 Sobic010G017400 Sobic010G017400 Sobic008G006800--Sobic010G017400 Sobic008G006800--Sobic004G271300 Sobic008G006800--Sobic002G313000 Sobic002G296000 Sobic002G296000 Sobic008G006800--Sobic002G296000 Sobic010G129700 Sobic010G129700 Sobic002G313000--Sobic010G129700 Sobic002G313000--Sobic003G260700 Sobic002G313000--Sobic008G114900 Sobic002G313000--Sobic008G006800 Sobic002G313000--Sobic008G125700 Sobic001G140600 Sobic001G140600 Sobic002G313000--Sobic001G140600 Sobic002G313000--Sobic002G319300 Sobic002G313000--Sobic001G170800 Sobic002G313000--Sobic001G398400 Sobic004G339500--Sobic003G260700 Sobic004G339500--Sobic008G006800 Sobic004G339500--Sobic001G170800 Sobic004G339500--Sobic001G177900 Sobic004G339500--Sobic010G119300 Sobic004G339500--Sobic003G102000 Sobic004G339500--Sobic004G198100 Sobic004G339500--Sobic008G125700 Sobic004G339500--Sobic005G005700 Sobic009G146700 Sobic009G146700 Sobic005G199700--Sobic009G146700 Sobic003G338700 Sobic003G338700 Sobic005G199700--Sobic003G338700 Sobic002G363300 Sobic002G363300 Sobic005G199700--Sobic002G363300 Sobic007G180200 Sobic007G180200 Sobic005G199700--Sobic007G180200 Sobic001G286700 Sobic001G286700 Sobic005G199700--Sobic001G286700 Sobic006G273600 Sobic006G273600 Sobic005G199700--Sobic006G273600 Sobic003G010700 Sobic003G010700 Sobic005G199700--Sobic003G010700 Sobic003G027100 Sobic003G027100 Sobic005G199700--Sobic003G027100 Sobic010G014700 Sobic010G014700 Sobic005G199700--Sobic010G014700
Octagon: transcription factors


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