Gene annotation
Transcriptome id Sobic.001G140600.1
Synonym Sb01g012230
Functional annotation expressed protein
UniProt C5WPQ8
Pfam -
Panther DB PTHR34775 PTHR34775:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G16630 : -
RAP-DB (Rice) LOC_Os03g46920.1 : expressed protein
MaizeGDB (Corn) Zm00025a017129
Brachypodium KQK13829 , KQK13830
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G313000 targeting protein-related, putative, expressed K16812: targeting protein for Xklp2
2 Sobic.008G006800 inactive receptor kinase At2g26730 precursor, putative, expressed -
3 Sobic.001G177900 Kinesin motor domain domain containing protein, expressed K10400: kinesin family member 15
4 Sobic.001G540900 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
5 Sobic.003G260700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
6 Sobic.004G271300 DNA topoisomerase 2, putative, expressed K03164: DNA topoisomerase II
7 Sobic.010G215300 cyclin-dependent kinase B2-1, putative, expressed K07760: cyclin-dependent kinase
8 Sobic.003G102000 expressed protein -
9 Sobic.004G339500 kinesin motor domain containing protein, putative, expressed -
10 Sobic.008G125700 similar to F22D16.26 protein(PubMedID : 29862293)@CSLD4 - cellulose synthase-like family D, expressed K00770: 1,4-beta-D-xylan synthase
11 Sobic.003G444100 "OsCCS52B(Ortholog in rice:Su’udi et al., 2012)"(PubMedID : 31659875)@WD repeat-containing protein, putative, expressed K03364: cell division cycle 20-like protein 1, cofactor of APC complex
12 Sobic.001G155700 expansin precursor, putative, expressed -
13 Sobic.010G129700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
14 Sobic.010G119300 expressed protein -
15 Sobic.006G219500 remorin family protein, putative, expressed -
16 Sobic.001G170800 "Transport protein(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659835)@transport protein-related, putative, expressed -
17 Sobic.005G005700 inactive receptor kinase At2g26730 precursor, putative, expressed -
18 Sobic.003G328500 Expressed in younger stem(PubMedID : 28649278)@cyclin, putative, expressed K05868: G2/mitotic-specific cyclin-B1
19 Sobic.008G114900 rhoGAP domain containing protein, expressed -
20 Sobic.004G313200 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -


Gene co-expression network
sample Sobic001G140600 Sobic001G140600 Sobic002G313000 Sobic002G313000 Sobic001G140600--Sobic002G313000 Sobic008G006800 Sobic008G006800 Sobic001G140600--Sobic008G006800 Sobic001G177900 Sobic001G177900 Sobic001G140600--Sobic001G177900 Sobic001G540900 Sobic001G540900 Sobic001G140600--Sobic001G540900 Sobic003G260700 Sobic003G260700 Sobic001G140600--Sobic003G260700 Sobic004G271300 Sobic004G271300 Sobic001G140600--Sobic004G271300 Sobic010G215300 Sobic010G215300 Sobic001G140600--Sobic010G215300 Sobic003G102000 Sobic003G102000 Sobic001G140600--Sobic003G102000 Sobic004G339500 Sobic004G339500 Sobic001G140600--Sobic004G339500 Sobic010G129700 Sobic010G129700 Sobic002G313000--Sobic010G129700 Sobic002G313000--Sobic003G260700 Sobic008G114900 Sobic008G114900 Sobic002G313000--Sobic008G114900 Sobic002G313000--Sobic008G006800 Sobic008G125700 Sobic008G125700 Sobic002G313000--Sobic008G125700 Sobic002G313000--Sobic001G140600 Sobic002G319300 Sobic002G319300 Sobic002G313000--Sobic002G319300 Sobic001G170800 Sobic001G170800 Sobic002G313000--Sobic001G170800 Sobic001G398400 Sobic001G398400 Sobic002G313000--Sobic001G398400 Sobic005G005700 Sobic005G005700 Sobic008G006800--Sobic005G005700 Sobic010G119300 Sobic010G119300 Sobic008G006800--Sobic010G119300 Sobic008G006800--Sobic003G260700 Sobic008G006800--Sobic001G398400 Sobic008G006800--Sobic004G339500 Sobic010G017400 Sobic010G017400 Sobic008G006800--Sobic010G017400 Sobic008G006800--Sobic004G271300 Sobic008G006800--Sobic002G313000 Sobic002G296000 Sobic002G296000 Sobic008G006800--Sobic002G296000 Sobic007G168900 Sobic007G168900 Sobic001G177900--Sobic007G168900 Sobic003G314900 Sobic003G314900 Sobic001G177900--Sobic003G314900 Sobic005G000500 Sobic005G000500 Sobic001G177900--Sobic005G000500 Sobic001G177900--Sobic003G260700 Sobic001G177900--Sobic001G170800 Sobic010G008900 Sobic010G008900 Sobic001G177900--Sobic010G008900 Sobic001G177900--Sobic004G339500 Sobic005G144600 Sobic005G144600 Sobic001G177900--Sobic005G144600 Sobic003G294500 Sobic003G294500 Sobic001G177900--Sobic003G294500 Sobic004G257600 Sobic004G257600 Sobic001G540900--Sobic004G257600 Sobic007G000500 Sobic007G000500 Sobic001G540900--Sobic007G000500 Sobic001G540900--Sobic001G140600 Sobic001G540900--Sobic003G260700 Sobic001G540900--Sobic004G271300 Sobic001G540900--Sobic001G177900 Sobic001G540900--Sobic002G313000 Sobic003G444100 Sobic003G444100 Sobic001G540900--Sobic003G444100 Sobic001G540900--Sobic007G168900 Sobic003G260700--Sobic001G170800 Sobic003G260700--Sobic004G257600 Sobic003G260700--Sobic004G339500 Sobic003G260700--Sobic001G398400 Sobic004G198100 Sobic004G198100 Sobic003G260700--Sobic004G198100 Sobic003G260700--Sobic004G271300 Sobic003G260700--Sobic008G006800 Sobic003G260700--Sobic001G177900 Sobic003G260700--Sobic002G313000 Sobic004G271300--Sobic007G168900 Sobic004G271300--Sobic005G000500 Sobic004G271300--Sobic003G260700 Sobic004G271300--Sobic001G170800 Sobic004G271300--Sobic005G005700 Sobic004G271300--Sobic001G398400 Sobic004G271300--Sobic008G006800 Sobic004G271300--Sobic001G177900 Sobic004G271300--Sobic005G144600 Sobic001G098900 Sobic001G098900 Sobic010G215300--Sobic001G098900 Sobic010G234800 Sobic010G234800 Sobic010G215300--Sobic010G234800 Sobic003G414400 Sobic003G414400 Sobic010G215300--Sobic003G414400 Sobic010G202100 Sobic010G202100 Sobic010G215300--Sobic010G202100 Sobic010G215300--Sobic001G140600 Sobic003G047200 Sobic003G047200 Sobic010G215300--Sobic003G047200 Sobic008G114500 Sobic008G114500 Sobic010G215300--Sobic008G114500 Sobic010G215300--Sobic001G540900 Sobic001G284900 Sobic001G284900 Sobic010G215300--Sobic001G284900 Sobic003G102000--Sobic008G125700 Sobic003G102000--Sobic003G260700 Sobic003G102000--Sobic010G119300 Sobic003G102000--Sobic004G339500 Sobic003G102000--Sobic008G114900 Sobic003G102000--Sobic004G257600 Sobic003G102000--Sobic004G198100 Sobic003G102000--Sobic008G006800 Sobic003G102000--Sobic002G313000 Sobic004G339500--Sobic003G260700 Sobic004G339500--Sobic008G006800 Sobic004G339500--Sobic001G170800 Sobic004G339500--Sobic001G177900 Sobic004G339500--Sobic010G119300 Sobic004G339500--Sobic003G102000 Sobic004G339500--Sobic004G198100 Sobic004G339500--Sobic008G125700 Sobic004G339500--Sobic005G005700
Octagon: transcription factors


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