Gene annotation
Transcriptome id Sobic.003G444100.2,Sobic.003G444100.1
Synonym FZR3, Sb03g047370
Functional annotation "OsCCS52B(Ortholog in rice:Su’udi et al., 2012)" (PubMedID : 31659875)
WD repeat-containing protein, putative, expressed
UniProt A0A1W0W1J9 , C5XJE3
Pfam PF08662
Panther DB PTHR19918 PTHR19918:SF7
NCBI CDD KOG0305; Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits
KEGG Orthology K03364; cell division cycle 20-like protein 1, cofactor of APC complex
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G13840 : FIZZY-related 3
RAP-DB (Rice) LOC_Os01g74146.1 : WD repeat-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a025826
Brachypodium KQK23908 , KQK11759
Barley HORVU4Hr1G084710.2 , HORVU4Hr1G084710.3 , HORVU4Hr1G084710.1 , HORVU3Hr1G115170.5 , HORVU3Hr1G115170.6 , HORVU3Hr1G115170.7 , HORVU3Hr1G115170.1 , HORVU3Hr1G115170.2 , HORVU3Hr1G115170.3 , HORVU3Hr1G115170.4
Wheat TraesCS4D02G341200 , TraesCS4B02G346200 , TraesCS4B02G346200 , TraesCS3A02G527600 , TraesCS7B02G353500 , TraesCS3D02G533000 , TraesCS3B02G595600 , TraesCS1B02G166800
Populus PNT17667


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G000500 kinesin motor domain containing protein, putative, expressed K10398: KIF11, kinesin family member 11
2 Sobic.001G170800 "Transport protein(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659835)@transport protein-related, putative, expressed -
3 Sobic.003G260700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
4 Sobic.007G168900 kinesin motor domain containing protein, putative, expressed K10398: KIF11, kinesin family member 11
5 Sobic.001G177900 Kinesin motor domain domain containing protein, expressed K10400: kinesin family member 15
6 Sobic.001G398400 expressed protein -
7 Sobic.004G257600 zinc finger family protein, putative, expressed K18932: palmitoyltransferase
8 Sobic.003G314900 flap endonuclease, putative, expressed K10746: exonuclease 1
9 Sobic.010G105400 chromosome condensation protein like, putative, expressed K06678: YCG1, condensin complex subunit 3
10 Sobic.010G008900 kinesin motor domain containing protein, expressed K11498: centromeric protein E
11 Sobic.002G313000 targeting protein-related, putative, expressed K16812: targeting protein for Xklp2
12 Sobic.004G271300 DNA topoisomerase 2, putative, expressed K03164: DNA topoisomerase II
13 Sobic.004G339500 kinesin motor domain containing protein, putative, expressed -
14 Sobic.008G006800 inactive receptor kinase At2g26730 precursor, putative, expressed -
15 Sobic.008G148000 kinesin motor domain containing protein, putative, expressed K10400: kinesin family member 15
16 Sobic.005G144600 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
17 Sobic.009G184200 RecF/RecN/SMC N terminal domain containing protein, expressed K06675: structural maintenance of chromosome 4
18 Sobic.003G032200 IQ calmodulin-binding motif domain containing protein, expressed -
19 Sobic.002G426800 zinc finger, C3HC4 type domain containing protein, expressed -
20 Sobic.005G005700 inactive receptor kinase At2g26730 precursor, putative, expressed -


Gene co-expression network
sample Sobic003G444100 Sobic003G444100 Sobic005G000500 Sobic005G000500 Sobic003G444100--Sobic005G000500 Sobic001G170800 Sobic001G170800 Sobic003G444100--Sobic001G170800 Sobic003G260700 Sobic003G260700 Sobic003G444100--Sobic003G260700 Sobic007G168900 Sobic007G168900 Sobic003G444100--Sobic007G168900 Sobic001G177900 Sobic001G177900 Sobic003G444100--Sobic001G177900 Sobic001G398400 Sobic001G398400 Sobic003G444100--Sobic001G398400 Sobic004G257600 Sobic004G257600 Sobic003G444100--Sobic004G257600 Sobic003G314900 Sobic003G314900 Sobic003G444100--Sobic003G314900 Sobic010G105400 Sobic010G105400 Sobic003G444100--Sobic010G105400 Sobic005G000500--Sobic007G168900 Sobic005G000500--Sobic001G170800 Sobic008G148000 Sobic008G148000 Sobic005G000500--Sobic008G148000 Sobic005G000500--Sobic003G444100 Sobic005G000500--Sobic003G314900 Sobic004G271300 Sobic004G271300 Sobic005G000500--Sobic004G271300 Sobic005G144600 Sobic005G144600 Sobic005G000500--Sobic005G144600 Sobic010G008900 Sobic010G008900 Sobic005G000500--Sobic010G008900 Sobic005G000500--Sobic001G177900 Sobic001G170800--Sobic005G000500 Sobic001G170800--Sobic003G260700 Sobic001G170800--Sobic003G444100 Sobic001G170800--Sobic001G398400 Sobic001G170800--Sobic004G271300 Sobic001G170800--Sobic008G148000 Sobic001G170800--Sobic010G008900 Sobic001G170800--Sobic001G177900 Sobic004G339500 Sobic004G339500 Sobic001G170800--Sobic004G339500 Sobic003G260700--Sobic001G170800 Sobic003G260700--Sobic004G257600 Sobic003G260700--Sobic004G339500 Sobic003G260700--Sobic001G398400 Sobic004G198100 Sobic004G198100 Sobic003G260700--Sobic004G198100 Sobic003G260700--Sobic004G271300 Sobic008G006800 Sobic008G006800 Sobic003G260700--Sobic008G006800 Sobic003G260700--Sobic001G177900 Sobic002G313000 Sobic002G313000 Sobic003G260700--Sobic002G313000 Sobic007G168900--Sobic005G000500 Sobic007G168900--Sobic005G144600 Sobic007G168900--Sobic004G271300 Sobic007G168900--Sobic001G177900 Sobic007G168900--Sobic003G314900 Sobic003G294500 Sobic003G294500 Sobic007G168900--Sobic003G294500 Sobic007G168900--Sobic003G260700 Sobic007G168900--Sobic010G008900 Sobic010G147700 Sobic010G147700 Sobic007G168900--Sobic010G147700 Sobic001G177900--Sobic007G168900 Sobic001G177900--Sobic003G314900 Sobic001G177900--Sobic005G000500 Sobic001G177900--Sobic003G260700 Sobic001G177900--Sobic001G170800 Sobic001G177900--Sobic010G008900 Sobic001G177900--Sobic004G339500 Sobic001G177900--Sobic005G144600 Sobic001G177900--Sobic003G294500 Sobic001G398400--Sobic003G260700 Sobic001G398400--Sobic001G170800 Sobic001G398400--Sobic008G006800 Sobic009G184200 Sobic009G184200 Sobic001G398400--Sobic009G184200 Sobic001G398400--Sobic004G271300 Sobic005G005700 Sobic005G005700 Sobic001G398400--Sobic005G005700 Sobic001G398400--Sobic010G105400 Sobic001G398400--Sobic004G198100 Sobic001G398400--Sobic004G257600 Sobic004G257600--Sobic003G260700 Sobic003G387700 Sobic003G387700 Sobic004G257600--Sobic003G387700 Sobic004G257600--Sobic001G398400 Sobic004G257600--Sobic001G177900 Sobic004G257600--Sobic004G198100 Sobic004G257600--Sobic001G170800 Sobic004G257600--Sobic003G444100 Sobic004G257600--Sobic007G168900 Sobic004G257600--Sobic004G339500 Sobic003G314900--Sobic005G000500 Sobic003G314900--Sobic007G168900 Sobic003G314900--Sobic001G177900 Sobic003G314900--Sobic010G008900 Sobic003G314900--Sobic005G144600 Sobic003G314900--Sobic003G294500 Sobic003G314900--Sobic003G260700 Sobic003G314900--Sobic001G170800 Sobic003G314900--Sobic004G271300 Sobic010G105400--Sobic005G144600 Sobic004G047100 Sobic004G047100 Sobic010G105400--Sobic004G047100 Sobic010G105400--Sobic009G184200 Sobic010G105400--Sobic005G000500 Sobic010G105400--Sobic001G398400 Sobic003G179500 Sobic003G179500 Sobic010G105400--Sobic003G179500 Sobic006G124400 Sobic006G124400 Sobic010G105400--Sobic006G124400 Sobic010G105400--Sobic007G168900 Sobic002G204400 Sobic002G204400 Sobic010G105400--Sobic002G204400
Octagon: transcription factors


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