Gene annotation
Transcriptome id Sobic.001G170800.1
Synonym Sb01g014940
Functional annotation "Transport protein(Ortholog in rice:Huang et al., 2012)" (PubMedID : 31659835)
transport protein-related, putative, expressed
UniProt C5WT70 , H0I4D0
Pfam -
Panther DB PTHR36325
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G49870 : -
RAP-DB (Rice) LOC_Os03g40780.1 : transport protein-related, putative, expressed
MaizeGDB (Corn) Zm00025a007225
Brachypodium PNT74452
Barley -
Wheat TraesCS4B02G077500 , TraesCS4D02G075900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G000500 kinesin motor domain containing protein, putative, expressed K10398: KIF11, kinesin family member 11
2 Sobic.003G260700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
3 Sobic.003G444100 "OsCCS52B(Ortholog in rice:Su’udi et al., 2012)"(PubMedID : 31659875)@WD repeat-containing protein, putative, expressed K03364: cell division cycle 20-like protein 1, cofactor of APC complex
4 Sobic.001G398400 expressed protein -
5 Sobic.004G271300 DNA topoisomerase 2, putative, expressed K03164: DNA topoisomerase II
6 Sobic.008G148000 kinesin motor domain containing protein, putative, expressed K10400: kinesin family member 15
7 Sobic.010G008900 kinesin motor domain containing protein, expressed K11498: centromeric protein E
8 Sobic.001G177900 Kinesin motor domain domain containing protein, expressed K10400: kinesin family member 15
9 Sobic.004G339500 kinesin motor domain containing protein, putative, expressed -
10 Sobic.007G168900 kinesin motor domain containing protein, putative, expressed K10398: KIF11, kinesin family member 11
11 Sobic.003G314900 flap endonuclease, putative, expressed K10746: exonuclease 1
12 Sobic.009G184200 RecF/RecN/SMC N terminal domain containing protein, expressed K06675: structural maintenance of chromosome 4
13 Sobic.008G006800 inactive receptor kinase At2g26730 precursor, putative, expressed -
14 Sobic.002G313000 targeting protein-related, putative, expressed K16812: targeting protein for Xklp2
15 Sobic.004G198100 expressed protein -
16 Sobic.004G257600 zinc finger family protein, putative, expressed K18932: palmitoyltransferase
17 Sobic.010G017400 DLT(Ortholog in rice:Tong et al. (2012))(PubMedID : 31659927)@DELLA protein SLR1, putative, expressed -
18 Sobic.002G255500 expressed protein -
19 Sobic.010G119300 expressed protein -
20 Sobic.010G105400 chromosome condensation protein like, putative, expressed K06678: YCG1, condensin complex subunit 3


Gene co-expression network
sample Sobic001G170800 Sobic001G170800 Sobic005G000500 Sobic005G000500 Sobic001G170800--Sobic005G000500 Sobic003G260700 Sobic003G260700 Sobic001G170800--Sobic003G260700 Sobic003G444100 Sobic003G444100 Sobic001G170800--Sobic003G444100 Sobic001G398400 Sobic001G398400 Sobic001G170800--Sobic001G398400 Sobic004G271300 Sobic004G271300 Sobic001G170800--Sobic004G271300 Sobic008G148000 Sobic008G148000 Sobic001G170800--Sobic008G148000 Sobic010G008900 Sobic010G008900 Sobic001G170800--Sobic010G008900 Sobic001G177900 Sobic001G177900 Sobic001G170800--Sobic001G177900 Sobic004G339500 Sobic004G339500 Sobic001G170800--Sobic004G339500 Sobic007G168900 Sobic007G168900 Sobic005G000500--Sobic007G168900 Sobic005G000500--Sobic001G170800 Sobic005G000500--Sobic008G148000 Sobic005G000500--Sobic003G444100 Sobic003G314900 Sobic003G314900 Sobic005G000500--Sobic003G314900 Sobic005G000500--Sobic004G271300 Sobic005G144600 Sobic005G144600 Sobic005G000500--Sobic005G144600 Sobic005G000500--Sobic010G008900 Sobic005G000500--Sobic001G177900 Sobic003G260700--Sobic001G170800 Sobic004G257600 Sobic004G257600 Sobic003G260700--Sobic004G257600 Sobic003G260700--Sobic004G339500 Sobic003G260700--Sobic001G398400 Sobic004G198100 Sobic004G198100 Sobic003G260700--Sobic004G198100 Sobic003G260700--Sobic004G271300 Sobic008G006800 Sobic008G006800 Sobic003G260700--Sobic008G006800 Sobic003G260700--Sobic001G177900 Sobic002G313000 Sobic002G313000 Sobic003G260700--Sobic002G313000 Sobic003G444100--Sobic005G000500 Sobic003G444100--Sobic001G170800 Sobic003G444100--Sobic003G260700 Sobic003G444100--Sobic007G168900 Sobic003G444100--Sobic001G177900 Sobic003G444100--Sobic001G398400 Sobic003G444100--Sobic004G257600 Sobic003G444100--Sobic003G314900 Sobic010G105400 Sobic010G105400 Sobic003G444100--Sobic010G105400 Sobic001G398400--Sobic003G260700 Sobic001G398400--Sobic001G170800 Sobic001G398400--Sobic008G006800 Sobic009G184200 Sobic009G184200 Sobic001G398400--Sobic009G184200 Sobic001G398400--Sobic004G271300 Sobic005G005700 Sobic005G005700 Sobic001G398400--Sobic005G005700 Sobic001G398400--Sobic010G105400 Sobic001G398400--Sobic004G198100 Sobic001G398400--Sobic004G257600 Sobic004G271300--Sobic007G168900 Sobic004G271300--Sobic005G000500 Sobic004G271300--Sobic003G260700 Sobic004G271300--Sobic001G170800 Sobic004G271300--Sobic005G005700 Sobic004G271300--Sobic001G398400 Sobic004G271300--Sobic008G006800 Sobic004G271300--Sobic001G177900 Sobic004G271300--Sobic005G144600 Sobic008G148000--Sobic005G000500 Sobic002G204400 Sobic002G204400 Sobic008G148000--Sobic002G204400 Sobic008G148000--Sobic001G170800 Sobic008G148000--Sobic010G008900 Sobic008G148000--Sobic007G168900 Sobic008G148000--Sobic004G271300 Sobic008G148000--Sobic003G444100 Sobic008G148000--Sobic003G314900 Sobic008G148000--Sobic009G184200 Sobic010G008900--Sobic005G000500 Sobic010G008900--Sobic003G314900 Sobic010G008900--Sobic001G170800 Sobic010G008900--Sobic007G168900 Sobic001G029800 Sobic001G029800 Sobic010G008900--Sobic001G029800 Sobic010G008900--Sobic001G177900 Sobic003G294500 Sobic003G294500 Sobic010G008900--Sobic003G294500 Sobic010G008900--Sobic004G271300 Sobic010G008900--Sobic008G148000 Sobic001G177900--Sobic007G168900 Sobic001G177900--Sobic003G314900 Sobic001G177900--Sobic005G000500 Sobic001G177900--Sobic003G260700 Sobic001G177900--Sobic001G170800 Sobic001G177900--Sobic010G008900 Sobic001G177900--Sobic004G339500 Sobic001G177900--Sobic005G144600 Sobic001G177900--Sobic003G294500 Sobic004G339500--Sobic003G260700 Sobic004G339500--Sobic008G006800 Sobic004G339500--Sobic001G170800 Sobic004G339500--Sobic001G177900 Sobic010G119300 Sobic010G119300 Sobic004G339500--Sobic010G119300 Sobic003G102000 Sobic003G102000 Sobic004G339500--Sobic003G102000 Sobic004G339500--Sobic004G198100 Sobic008G125700 Sobic008G125700 Sobic004G339500--Sobic008G125700 Sobic004G339500--Sobic005G005700
Octagon: transcription factors


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