Gene annotation
Transcriptome id Sobic.010G017400.1
Synonym Sb10g001690
Functional annotation DLT(Ortholog in rice:Tong et al. (2012)) (PubMedID : 31659927)
DELLA protein SLR1, putative, expressed
UniProt C5Z374
Pfam PF03514
Panther DB PTHR31636 PTHR31636:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G63100 : GRAS family transcription factor
RAP-DB (Rice) LOC_Os06g03710.1 : DELLA protein SLR1, putative, expressed
MaizeGDB (Corn) Zm00025a025370 , Zm00025a007155 , Zm00025a050215
Brachypodium KQK19660
Barley HORVU7Hr1G029080.1 , HORVU7Hr1G010620.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G006800 inactive receptor kinase At2g26730 precursor, putative, expressed -
2 Sobic.005G005700 inactive receptor kinase At2g26730 precursor, putative, expressed -
3 Sobic.002G296000 HEAT repeat family protein, putative, expressed -
4 Sobic.001G170800 "Transport protein(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659835)@transport protein-related, putative, expressed -
5 Sobic.001G177900 Kinesin motor domain domain containing protein, expressed K10400: kinesin family member 15
6 Sobic.001G398400 expressed protein -
7 Sobic.004G271300 DNA topoisomerase 2, putative, expressed K03164: DNA topoisomerase II
8 Sobic.007G168900 kinesin motor domain containing protein, putative, expressed K10398: KIF11, kinesin family member 11
9 Sobic.010G008900 kinesin motor domain containing protein, expressed K11498: centromeric protein E
10 Sobic.004G339500 kinesin motor domain containing protein, putative, expressed -
11 Sobic.004G287700 expressed protein -
12 Sobic.006G124400 ATP binding protein, putative, expressed -
13 Sobic.005G000500 kinesin motor domain containing protein, putative, expressed K10398: KIF11, kinesin family member 11
14 Sobic.004G257600 zinc finger family protein, putative, expressed K18932: palmitoyltransferase
15 Sobic.002G142200 expressed protein -
16 Sobic.003G260700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
17 Sobic.003G444100 "OsCCS52B(Ortholog in rice:Su’udi et al., 2012)"(PubMedID : 31659875)@WD repeat-containing protein, putative, expressed K03364: cell division cycle 20-like protein 1, cofactor of APC complex
18 Sobic.010G119300 expressed protein -
19 Sobic.001G477400 AUXIN SIGNALING F-BOX 2, putative, expressed -
20 Sobic.002G255500 expressed protein -


Gene co-expression network
sample Sobic010G017400 Sobic010G017400 Sobic008G006800 Sobic008G006800 Sobic010G017400--Sobic008G006800 Sobic005G005700 Sobic005G005700 Sobic010G017400--Sobic005G005700 Sobic002G296000 Sobic002G296000 Sobic010G017400--Sobic002G296000 Sobic001G170800 Sobic001G170800 Sobic010G017400--Sobic001G170800 Sobic001G177900 Sobic001G177900 Sobic010G017400--Sobic001G177900 Sobic001G398400 Sobic001G398400 Sobic010G017400--Sobic001G398400 Sobic004G271300 Sobic004G271300 Sobic010G017400--Sobic004G271300 Sobic007G168900 Sobic007G168900 Sobic010G017400--Sobic007G168900 Sobic010G008900 Sobic010G008900 Sobic010G017400--Sobic010G008900 Sobic008G006800--Sobic005G005700 Sobic010G119300 Sobic010G119300 Sobic008G006800--Sobic010G119300 Sobic003G260700 Sobic003G260700 Sobic008G006800--Sobic003G260700 Sobic008G006800--Sobic001G398400 Sobic004G339500 Sobic004G339500 Sobic008G006800--Sobic004G339500 Sobic008G006800--Sobic010G017400 Sobic008G006800--Sobic004G271300 Sobic002G313000 Sobic002G313000 Sobic008G006800--Sobic002G313000 Sobic008G006800--Sobic002G296000 Sobic005G005700--Sobic008G006800 Sobic005G005700--Sobic004G271300 Sobic005G005700--Sobic010G017400 Sobic005G005700--Sobic002G296000 Sobic005G005700--Sobic001G398400 Sobic005G005700--Sobic010G119300 Sobic005G005700--Sobic003G260700 Sobic007G027900 Sobic007G027900 Sobic005G005700--Sobic007G027900 Sobic005G005700--Sobic007G168900 Sobic002G296000--Sobic007G027900 Sobic006G124400 Sobic006G124400 Sobic002G296000--Sobic006G124400 Sobic009G101100 Sobic009G101100 Sobic002G296000--Sobic009G101100 Sobic002G296000--Sobic007G168900 Sobic002G296000--Sobic005G005700 Sobic002G296000--Sobic008G006800 Sobic002G296000--Sobic004G271300 Sobic002G296000--Sobic010G017400 Sobic008G083500 Sobic008G083500 Sobic002G296000--Sobic008G083500 Sobic005G000500 Sobic005G000500 Sobic001G170800--Sobic005G000500 Sobic001G170800--Sobic003G260700 Sobic003G444100 Sobic003G444100 Sobic001G170800--Sobic003G444100 Sobic001G170800--Sobic001G398400 Sobic001G170800--Sobic004G271300 Sobic008G148000 Sobic008G148000 Sobic001G170800--Sobic008G148000 Sobic001G170800--Sobic010G008900 Sobic001G170800--Sobic001G177900 Sobic001G170800--Sobic004G339500 Sobic001G177900--Sobic007G168900 Sobic003G314900 Sobic003G314900 Sobic001G177900--Sobic003G314900 Sobic001G177900--Sobic005G000500 Sobic001G177900--Sobic003G260700 Sobic001G177900--Sobic001G170800 Sobic001G177900--Sobic010G008900 Sobic001G177900--Sobic004G339500 Sobic005G144600 Sobic005G144600 Sobic001G177900--Sobic005G144600 Sobic003G294500 Sobic003G294500 Sobic001G177900--Sobic003G294500 Sobic001G398400--Sobic003G260700 Sobic001G398400--Sobic001G170800 Sobic001G398400--Sobic008G006800 Sobic009G184200 Sobic009G184200 Sobic001G398400--Sobic009G184200 Sobic001G398400--Sobic004G271300 Sobic001G398400--Sobic005G005700 Sobic010G105400 Sobic010G105400 Sobic001G398400--Sobic010G105400 Sobic004G198100 Sobic004G198100 Sobic001G398400--Sobic004G198100 Sobic004G257600 Sobic004G257600 Sobic001G398400--Sobic004G257600 Sobic004G271300--Sobic007G168900 Sobic004G271300--Sobic005G000500 Sobic004G271300--Sobic003G260700 Sobic004G271300--Sobic001G170800 Sobic004G271300--Sobic005G005700 Sobic004G271300--Sobic001G398400 Sobic004G271300--Sobic008G006800 Sobic004G271300--Sobic001G177900 Sobic004G271300--Sobic005G144600 Sobic007G168900--Sobic005G000500 Sobic007G168900--Sobic005G144600 Sobic007G168900--Sobic004G271300 Sobic007G168900--Sobic001G177900 Sobic007G168900--Sobic003G314900 Sobic007G168900--Sobic003G294500 Sobic007G168900--Sobic003G260700 Sobic007G168900--Sobic010G008900 Sobic010G147700 Sobic010G147700 Sobic007G168900--Sobic010G147700 Sobic010G008900--Sobic005G000500 Sobic010G008900--Sobic003G314900 Sobic010G008900--Sobic001G170800 Sobic010G008900--Sobic007G168900 Sobic001G029800 Sobic001G029800 Sobic010G008900--Sobic001G029800 Sobic010G008900--Sobic001G177900 Sobic010G008900--Sobic003G294500 Sobic010G008900--Sobic004G271300 Sobic010G008900--Sobic008G148000
Octagon: transcription factors


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