Gene annotation
Transcriptome id Sobic.005G005700.1
Synonym IMK2, Sb05g000670
Functional annotation inactive receptor kinase At2g26730 precursor, putative, expressed
UniProt C5Y312
Pfam PF08263 PF00560 PF07714
Panther DB PTHR27008 PTHR27008:SF27
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G56100 : meristematic receptor-like kinase
RAP-DB (Rice) LOC_Os11g01620.1 : inactive receptor kinase At2g26730 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a026966 , Zm00025a030119 , Zm00025a033284 , Zm00025a033032 , Zm00025a040465
Brachypodium KQJ92615 , KQK22087
Barley HORVU4Hr1G024500.1 , HORVU4Hr1G024500.5 , HORVU4Hr1G024500.4 , HORVU4Hr1G024500.6 , HORVU4Hr1G024500.3 , HORVU4Hr1G024500.2 , HORVU2Hr1G023110.4 , HORVU2Hr1G023110.1 , HORVU2Hr1G023110.3 , HORVU2Hr1G023110.2
Wheat TraesCS2B02G154100 , TraesCS2D02G133800 , TraesCS4D02G132100 , TraesCS4A02G180100 , TraesCS3B02G389600 , TraesCS4B02G137400 , TraesCS2A02G131700 , TraesCS7A02G522400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G006800 inactive receptor kinase At2g26730 precursor, putative, expressed -
2 Sobic.004G271300 DNA topoisomerase 2, putative, expressed K03164: DNA topoisomerase II
3 Sobic.010G017400 DLT(Ortholog in rice:Tong et al. (2012))(PubMedID : 31659927)@DELLA protein SLR1, putative, expressed -
4 Sobic.002G296000 HEAT repeat family protein, putative, expressed -
5 Sobic.001G398400 expressed protein -
6 Sobic.010G119300 expressed protein -
7 Sobic.003G260700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
8 Sobic.007G027900 chloroplast unusual positioning protein, putative, expressed -
9 Sobic.007G168900 kinesin motor domain containing protein, putative, expressed K10398: KIF11, kinesin family member 11
10 Sobic.001G477400 AUXIN SIGNALING F-BOX 2, putative, expressed -
11 Sobic.004G339500 kinesin motor domain containing protein, putative, expressed -
12 Sobic.006G124400 ATP binding protein, putative, expressed -
13 Sobic.004G198100 expressed protein -
14 Sobic.005G000500 kinesin motor domain containing protein, putative, expressed K10398: KIF11, kinesin family member 11
15 Sobic.001G170800 "Transport protein(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659835)@transport protein-related, putative, expressed -
16 Sobic.002G313000 targeting protein-related, putative, expressed K16812: targeting protein for Xklp2
17 Sobic.001G177900 Kinesin motor domain domain containing protein, expressed K10400: kinesin family member 15
18 Sobic.004G257600 zinc finger family protein, putative, expressed K18932: palmitoyltransferase
19 Sobic.008G125700 similar to F22D16.26 protein(PubMedID : 29862293)@CSLD4 - cellulose synthase-like family D, expressed K00770: 1,4-beta-D-xylan synthase
20 Sobic.003G444100 "OsCCS52B(Ortholog in rice:Su’udi et al., 2012)"(PubMedID : 31659875)@WD repeat-containing protein, putative, expressed K03364: cell division cycle 20-like protein 1, cofactor of APC complex


Gene co-expression network
sample Sobic005G005700 Sobic005G005700 Sobic008G006800 Sobic008G006800 Sobic005G005700--Sobic008G006800 Sobic004G271300 Sobic004G271300 Sobic005G005700--Sobic004G271300 Sobic010G017400 Sobic010G017400 Sobic005G005700--Sobic010G017400 Sobic002G296000 Sobic002G296000 Sobic005G005700--Sobic002G296000 Sobic001G398400 Sobic001G398400 Sobic005G005700--Sobic001G398400 Sobic010G119300 Sobic010G119300 Sobic005G005700--Sobic010G119300 Sobic003G260700 Sobic003G260700 Sobic005G005700--Sobic003G260700 Sobic007G027900 Sobic007G027900 Sobic005G005700--Sobic007G027900 Sobic007G168900 Sobic007G168900 Sobic005G005700--Sobic007G168900 Sobic008G006800--Sobic005G005700 Sobic008G006800--Sobic010G119300 Sobic008G006800--Sobic003G260700 Sobic008G006800--Sobic001G398400 Sobic004G339500 Sobic004G339500 Sobic008G006800--Sobic004G339500 Sobic008G006800--Sobic010G017400 Sobic008G006800--Sobic004G271300 Sobic002G313000 Sobic002G313000 Sobic008G006800--Sobic002G313000 Sobic008G006800--Sobic002G296000 Sobic004G271300--Sobic007G168900 Sobic005G000500 Sobic005G000500 Sobic004G271300--Sobic005G000500 Sobic004G271300--Sobic003G260700 Sobic001G170800 Sobic001G170800 Sobic004G271300--Sobic001G170800 Sobic004G271300--Sobic005G005700 Sobic004G271300--Sobic001G398400 Sobic004G271300--Sobic008G006800 Sobic001G177900 Sobic001G177900 Sobic004G271300--Sobic001G177900 Sobic005G144600 Sobic005G144600 Sobic004G271300--Sobic005G144600 Sobic010G017400--Sobic008G006800 Sobic010G017400--Sobic005G005700 Sobic010G017400--Sobic002G296000 Sobic010G017400--Sobic001G170800 Sobic010G017400--Sobic001G177900 Sobic010G017400--Sobic001G398400 Sobic010G017400--Sobic004G271300 Sobic010G017400--Sobic007G168900 Sobic010G008900 Sobic010G008900 Sobic010G017400--Sobic010G008900 Sobic002G296000--Sobic007G027900 Sobic006G124400 Sobic006G124400 Sobic002G296000--Sobic006G124400 Sobic009G101100 Sobic009G101100 Sobic002G296000--Sobic009G101100 Sobic002G296000--Sobic007G168900 Sobic002G296000--Sobic005G005700 Sobic002G296000--Sobic008G006800 Sobic002G296000--Sobic004G271300 Sobic002G296000--Sobic010G017400 Sobic008G083500 Sobic008G083500 Sobic002G296000--Sobic008G083500 Sobic001G398400--Sobic003G260700 Sobic001G398400--Sobic001G170800 Sobic001G398400--Sobic008G006800 Sobic009G184200 Sobic009G184200 Sobic001G398400--Sobic009G184200 Sobic001G398400--Sobic004G271300 Sobic001G398400--Sobic005G005700 Sobic010G105400 Sobic010G105400 Sobic001G398400--Sobic010G105400 Sobic004G198100 Sobic004G198100 Sobic001G398400--Sobic004G198100 Sobic004G257600 Sobic004G257600 Sobic001G398400--Sobic004G257600 Sobic008G125700 Sobic008G125700 Sobic010G119300--Sobic008G125700 Sobic010G119300--Sobic008G006800 Sobic010G119300--Sobic003G260700 Sobic010G119300--Sobic004G198100 Sobic003G102000 Sobic003G102000 Sobic010G119300--Sobic003G102000 Sobic010G119300--Sobic005G005700 Sobic010G119300--Sobic004G339500 Sobic008G114900 Sobic008G114900 Sobic010G119300--Sobic008G114900 Sobic010G119300--Sobic001G398400 Sobic003G260700--Sobic001G170800 Sobic003G260700--Sobic004G257600 Sobic003G260700--Sobic004G339500 Sobic003G260700--Sobic001G398400 Sobic003G260700--Sobic004G198100 Sobic003G260700--Sobic004G271300 Sobic003G260700--Sobic008G006800 Sobic003G260700--Sobic001G177900 Sobic003G260700--Sobic002G313000 Sobic007G027900--Sobic002G296000 Sobic007G027900--Sobic005G005700 Sobic007G027900--Sobic004G271300 Sobic007G027900--Sobic009G101100 Sobic002G204400 Sobic002G204400 Sobic007G027900--Sobic002G204400 Sobic007G027900--Sobic006G124400 Sobic007G027900--Sobic008G006800 Sobic007G027900--Sobic007G168900 Sobic007G027900--Sobic001G398400 Sobic007G168900--Sobic005G000500 Sobic007G168900--Sobic005G144600 Sobic007G168900--Sobic004G271300 Sobic007G168900--Sobic001G177900 Sobic003G314900 Sobic003G314900 Sobic007G168900--Sobic003G314900 Sobic003G294500 Sobic003G294500 Sobic007G168900--Sobic003G294500 Sobic007G168900--Sobic003G260700 Sobic007G168900--Sobic010G008900 Sobic010G147700 Sobic010G147700 Sobic007G168900--Sobic010G147700
Octagon: transcription factors


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