Gene annotation
Transcriptome id Sobic.004G198100.1
Synonym UVI4-LIKE, OSD1, Sb04g024480
Functional annotation expressed protein
UniProt C5XWF1
Pfam -
Panther DB PTHR35119
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G57860 : UV-B-insensitive 4-like
RAP-DB (Rice) LOC_Os02g37850.1 : expressed protein
MaizeGDB (Corn) Zm00025a021353
Brachypodium PNT65343
Barley -
Wheat TraesCS6B02G225400 , TraesCS6D02G190300
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G260700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
2 Sobic.010G119300 expressed protein -
3 Sobic.001G398400 expressed protein -
4 Sobic.008G125700 similar to F22D16.26 protein(PubMedID : 29862293)@CSLD4 - cellulose synthase-like family D, expressed K00770: 1,4-beta-D-xylan synthase
5 Sobic.004G257600 zinc finger family protein, putative, expressed K18932: palmitoyltransferase
6 Sobic.001G170800 "Transport protein(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659835)@transport protein-related, putative, expressed -
7 Sobic.004G339500 kinesin motor domain containing protein, putative, expressed -
8 Sobic.002G313000 targeting protein-related, putative, expressed K16812: targeting protein for Xklp2
9 Sobic.004G271300 DNA topoisomerase 2, putative, expressed K03164: DNA topoisomerase II
10 Sobic.008G006800 inactive receptor kinase At2g26730 precursor, putative, expressed -
11 Sobic.008G114900 rhoGAP domain containing protein, expressed -
12 Sobic.005G005700 inactive receptor kinase At2g26730 precursor, putative, expressed -
13 Sobic.001G477400 AUXIN SIGNALING F-BOX 2, putative, expressed -
14 Sobic.003G102000 expressed protein -
15 Sobic.009G184200 RecF/RecN/SMC N terminal domain containing protein, expressed K06675: structural maintenance of chromosome 4
16 Sobic.010G129700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
17 Sobic.006G221800 OsFBX46 - F-box domain containing protein, expressed -
18 Sobic.001G091500 expressed protein -
19 Sobic.003G387700 expressed protein -
20 Sobic.007G168900 kinesin motor domain containing protein, putative, expressed K10398: KIF11, kinesin family member 11


Gene co-expression network
sample Sobic004G198100 Sobic004G198100 Sobic003G260700 Sobic003G260700 Sobic004G198100--Sobic003G260700 Sobic010G119300 Sobic010G119300 Sobic004G198100--Sobic010G119300 Sobic001G398400 Sobic001G398400 Sobic004G198100--Sobic001G398400 Sobic008G125700 Sobic008G125700 Sobic004G198100--Sobic008G125700 Sobic004G257600 Sobic004G257600 Sobic004G198100--Sobic004G257600 Sobic001G170800 Sobic001G170800 Sobic004G198100--Sobic001G170800 Sobic004G339500 Sobic004G339500 Sobic004G198100--Sobic004G339500 Sobic002G313000 Sobic002G313000 Sobic004G198100--Sobic002G313000 Sobic004G271300 Sobic004G271300 Sobic004G198100--Sobic004G271300 Sobic003G260700--Sobic001G170800 Sobic003G260700--Sobic004G257600 Sobic003G260700--Sobic004G339500 Sobic003G260700--Sobic001G398400 Sobic003G260700--Sobic004G198100 Sobic003G260700--Sobic004G271300 Sobic008G006800 Sobic008G006800 Sobic003G260700--Sobic008G006800 Sobic001G177900 Sobic001G177900 Sobic003G260700--Sobic001G177900 Sobic003G260700--Sobic002G313000 Sobic010G119300--Sobic008G125700 Sobic010G119300--Sobic008G006800 Sobic010G119300--Sobic003G260700 Sobic010G119300--Sobic004G198100 Sobic003G102000 Sobic003G102000 Sobic010G119300--Sobic003G102000 Sobic005G005700 Sobic005G005700 Sobic010G119300--Sobic005G005700 Sobic010G119300--Sobic004G339500 Sobic008G114900 Sobic008G114900 Sobic010G119300--Sobic008G114900 Sobic010G119300--Sobic001G398400 Sobic001G398400--Sobic003G260700 Sobic001G398400--Sobic001G170800 Sobic001G398400--Sobic008G006800 Sobic009G184200 Sobic009G184200 Sobic001G398400--Sobic009G184200 Sobic001G398400--Sobic004G271300 Sobic001G398400--Sobic005G005700 Sobic010G105400 Sobic010G105400 Sobic001G398400--Sobic010G105400 Sobic001G398400--Sobic004G198100 Sobic001G398400--Sobic004G257600 Sobic008G125700--Sobic010G119300 Sobic008G125700--Sobic008G114900 Sobic008G125700--Sobic003G102000 Sobic008G125700--Sobic003G260700 Sobic008G125700--Sobic004G198100 Sobic008G125700--Sobic008G006800 Sobic008G125700--Sobic002G313000 Sobic008G125700--Sobic004G339500 Sobic005G199700 Sobic005G199700 Sobic008G125700--Sobic005G199700 Sobic004G257600--Sobic003G260700 Sobic003G387700 Sobic003G387700 Sobic004G257600--Sobic003G387700 Sobic004G257600--Sobic001G398400 Sobic004G257600--Sobic001G177900 Sobic004G257600--Sobic004G198100 Sobic004G257600--Sobic001G170800 Sobic003G444100 Sobic003G444100 Sobic004G257600--Sobic003G444100 Sobic007G168900 Sobic007G168900 Sobic004G257600--Sobic007G168900 Sobic004G257600--Sobic004G339500 Sobic005G000500 Sobic005G000500 Sobic001G170800--Sobic005G000500 Sobic001G170800--Sobic003G260700 Sobic001G170800--Sobic003G444100 Sobic001G170800--Sobic001G398400 Sobic001G170800--Sobic004G271300 Sobic008G148000 Sobic008G148000 Sobic001G170800--Sobic008G148000 Sobic010G008900 Sobic010G008900 Sobic001G170800--Sobic010G008900 Sobic001G170800--Sobic001G177900 Sobic001G170800--Sobic004G339500 Sobic004G339500--Sobic003G260700 Sobic004G339500--Sobic008G006800 Sobic004G339500--Sobic001G170800 Sobic004G339500--Sobic001G177900 Sobic004G339500--Sobic010G119300 Sobic004G339500--Sobic003G102000 Sobic004G339500--Sobic004G198100 Sobic004G339500--Sobic008G125700 Sobic004G339500--Sobic005G005700 Sobic010G129700 Sobic010G129700 Sobic002G313000--Sobic010G129700 Sobic002G313000--Sobic003G260700 Sobic002G313000--Sobic008G114900 Sobic002G313000--Sobic008G006800 Sobic002G313000--Sobic008G125700 Sobic001G140600 Sobic001G140600 Sobic002G313000--Sobic001G140600 Sobic002G319300 Sobic002G319300 Sobic002G313000--Sobic002G319300 Sobic002G313000--Sobic001G170800 Sobic002G313000--Sobic001G398400 Sobic004G271300--Sobic007G168900 Sobic004G271300--Sobic005G000500 Sobic004G271300--Sobic003G260700 Sobic004G271300--Sobic001G170800 Sobic004G271300--Sobic005G005700 Sobic004G271300--Sobic001G398400 Sobic004G271300--Sobic008G006800 Sobic004G271300--Sobic001G177900 Sobic005G144600 Sobic005G144600 Sobic004G271300--Sobic005G144600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.