Gene annotation
Transcriptome id Sobic.006G221800.1
Synonym Sb06g029120
Functional annotation OsFBX46 - F-box domain containing protein, expressed
UniProt C5YG78
Pfam PF00646
Panther DB PTHR32133 PTHR32133:SF149
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g19200.1 : OsFBX46 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium PNT75200 , PNT75201
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G496400 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
2 Sobic.001G101700 OsGIF1(Ortholog in rice:He et al. (2017))(PubMedID : 31659832)@GRF-interacting factor 1, putative, expressed -
3 Sobic.008G114900 rhoGAP domain containing protein, expressed -
4 Sobic.004G003700 Trihelix Family(PubMedID : 24864043)@expressed protein -
5 Sobic.002G050700 tesmin/TSO1-like CXC domain containing protein, expressed -
6 Sobic.008G151600 PMR5, putative, expressed -
7 Sobic.002G319300 IQ calmodulin-binding motif family protein, expressed K16743: ASPM, abnormal spindle-like microcephaly-associated protein
8 Sobic.009G087700 proline-rich family protein, putative, expressed -
9 Sobic.001G493900 beta-galactosidase, putative, expressed -
10 Sobic.010G129700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
11 Sobic.004G198100 expressed protein -
12 Sobic.002G360500 expressed protein -
13 Sobic.001G155700 expansin precursor, putative, expressed -
14 Sobic.007G209200 CUP-SHAPED COTYLEDON3, putative, expressed -
15 Sobic.008G125700 similar to F22D16.26 protein(PubMedID : 29862293)@CSLD4 - cellulose synthase-like family D, expressed K00770: 1,4-beta-D-xylan synthase
16 Sobic.001G054700 seed specific protein Bn15D14A, putative, expressed -
17 Sobic.001G143400 Trihelix Family(PubMedID : 24864043)@transcription factor, putative, expressed -
18 Sobic.006G232900 expressed protein -
19 Sobic.010G119300 expressed protein -
20 Sobic.001G379900 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein


Gene co-expression network
sample Sobic006G221800 Sobic006G221800 Sobic001G496400 Sobic001G496400 Sobic006G221800--Sobic001G496400 Sobic001G101700 Sobic001G101700 Sobic006G221800--Sobic001G101700 Sobic008G114900 Sobic008G114900 Sobic006G221800--Sobic008G114900 Sobic004G003700 Sobic004G003700 Sobic006G221800--Sobic004G003700 Sobic002G050700 Sobic002G050700 Sobic006G221800--Sobic002G050700 Sobic008G151600 Sobic008G151600 Sobic006G221800--Sobic008G151600 Sobic002G319300 Sobic002G319300 Sobic006G221800--Sobic002G319300 Sobic009G087700 Sobic009G087700 Sobic006G221800--Sobic009G087700 Sobic001G493900 Sobic001G493900 Sobic006G221800--Sobic001G493900 Sobic001G496400--Sobic006G221800 Sobic007G209200 Sobic007G209200 Sobic001G496400--Sobic007G209200 Sobic001G496400--Sobic008G114900 Sobic006G219500 Sobic006G219500 Sobic001G496400--Sobic006G219500 Sobic001G496400--Sobic004G003700 Sobic008G125700 Sobic008G125700 Sobic001G496400--Sobic008G125700 Sobic006G124400 Sobic006G124400 Sobic001G496400--Sobic006G124400 Sobic010G119300 Sobic010G119300 Sobic001G496400--Sobic010G119300 Sobic001G496400--Sobic001G101700 Sobic001G101700--Sobic006G221800 Sobic010G255000 Sobic010G255000 Sobic001G101700--Sobic010G255000 Sobic001G101700--Sobic004G003700 Sobic007G147200 Sobic007G147200 Sobic001G101700--Sobic007G147200 Sobic007G201900 Sobic007G201900 Sobic001G101700--Sobic007G201900 Sobic001G101700--Sobic007G209200 Sobic001G101700--Sobic008G151600 Sobic009G057800 Sobic009G057800 Sobic001G101700--Sobic009G057800 Sobic001G143400 Sobic001G143400 Sobic001G101700--Sobic001G143400 Sobic008G114900--Sobic008G125700 Sobic002G313000 Sobic002G313000 Sobic008G114900--Sobic002G313000 Sobic001G155700 Sobic001G155700 Sobic008G114900--Sobic001G155700 Sobic008G114900--Sobic010G119300 Sobic008G114900--Sobic006G219500 Sobic008G114900--Sobic002G319300 Sobic003G260700 Sobic003G260700 Sobic008G114900--Sobic003G260700 Sobic008G114900--Sobic001G493900 Sobic008G006800 Sobic008G006800 Sobic008G114900--Sobic008G006800 Sobic004G003700--Sobic001G143400 Sobic004G003700--Sobic007G209200 Sobic010G168700 Sobic010G168700 Sobic004G003700--Sobic010G168700 Sobic004G003700--Sobic007G147200 Sobic004G003700--Sobic006G221800 Sobic009G047500 Sobic009G047500 Sobic004G003700--Sobic009G047500 Sobic004G003700--Sobic001G101700 Sobic005G168400 Sobic005G168400 Sobic004G003700--Sobic005G168400 Sobic008G138000 Sobic008G138000 Sobic004G003700--Sobic008G138000 Sobic002G050700--Sobic006G221800 Sobic001G390400 Sobic001G390400 Sobic002G050700--Sobic001G390400 Sobic001G054700 Sobic001G054700 Sobic002G050700--Sobic001G054700 Sobic001G079900 Sobic001G079900 Sobic002G050700--Sobic001G079900 Sobic009G077300 Sobic009G077300 Sobic002G050700--Sobic009G077300 Sobic002G050700--Sobic004G003700 Sobic002G050700--Sobic001G101700 Sobic002G050700--Sobic001G496400 Sobic006G221300 Sobic006G221300 Sobic002G050700--Sobic006G221300 Sobic003G019900 Sobic003G019900 Sobic008G151600--Sobic003G019900 Sobic008G151600--Sobic006G221800 Sobic006G274200 Sobic006G274200 Sobic008G151600--Sobic006G274200 Sobic008G151600--Sobic001G493900 Sobic008G151600--Sobic001G101700 Sobic010G077000 Sobic010G077000 Sobic008G151600--Sobic010G077000 Sobic007G161600 Sobic007G161600 Sobic008G151600--Sobic007G161600 Sobic005G032600 Sobic005G032600 Sobic008G151600--Sobic005G032600 Sobic008G151600--Sobic007G147200 Sobic002G319300--Sobic001G155700 Sobic002G319300--Sobic008G114900 Sobic002G319300--Sobic001G493900 Sobic002G319300--Sobic002G313000 Sobic003G307200 Sobic003G307200 Sobic002G319300--Sobic003G307200 Sobic010G192500 Sobic010G192500 Sobic002G319300--Sobic010G192500 Sobic001G008300 Sobic001G008300 Sobic002G319300--Sobic001G008300 Sobic002G319300--Sobic006G221800 Sobic002G319300--Sobic006G219500 Sobic009G087700--Sobic006G221800 Sobic009G087700--Sobic004G003700 Sobic001G101900 Sobic001G101900 Sobic009G087700--Sobic001G101900 Sobic009G087700--Sobic007G147200 Sobic009G087700--Sobic008G125700 Sobic009G087700--Sobic001G101700 Sobic002G360500 Sobic002G360500 Sobic009G087700--Sobic002G360500 Sobic009G087700--Sobic001G496400 Sobic001G393200 Sobic001G393200 Sobic009G087700--Sobic001G393200 Sobic004G267600 Sobic004G267600 Sobic001G493900--Sobic004G267600 Sobic001G493900--Sobic003G019900 Sobic010G129700 Sobic010G129700 Sobic001G493900--Sobic010G129700 Sobic001G493900--Sobic002G319300 Sobic001G493900--Sobic008G114900 Sobic001G493900--Sobic001G155700 Sobic001G493900--Sobic010G192500 Sobic002G417000 Sobic002G417000 Sobic001G493900--Sobic002G417000 Sobic003G338700 Sobic003G338700 Sobic001G493900--Sobic003G338700
Octagon: transcription factors


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