Gene annotation
Transcriptome id Sobic.006G232900.3,Sobic.006G232900.4
Synonym Sb06g030060
Functional annotation expressed protein
UniProt A0A1B6PNH9 , A0A1Z5RFQ0
Pfam PF08387
Panther DB PTHR32212 PTHR32212:SF91
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G58960 : F-box/RNI-like superfamily protein,F-box/RNI-like/FBD-like domains-containing protein
RAP-DB (Rice) LOC_Os12g36000.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G221800 OsFBX46 - F-box domain containing protein, expressed -
2 Sobic.005G168400 expressed protein -
3 Sobic.001G143400 Trihelix Family(PubMedID : 24864043)@transcription factor, putative, expressed -
4 Sobic.004G003700 Trihelix Family(PubMedID : 24864043)@expressed protein -
5 Sobic.001G101700 OsGIF1(Ortholog in rice:He et al. (2017))(PubMedID : 31659832)@GRF-interacting factor 1, putative, expressed -
6 Sobic.010G255000 uncharacterized protein At4g06744 precursor, putative, expressed -
7 Sobic.004G198100 expressed protein -
8 Sobic.010G220800 zinc-binding protein, putative, expressed -
9 Sobic.007G147200 OsSub56 - Putative Subtilisin homologue, expressed -
10 Sobic.010G168700 GDSL-like lipase/acylhydrolase, putative, expressed -
11 Sobic.002G268300 3-ketoacyl-CoA synthase precursor, putative, expressed -
12 Sobic.001G175100 DEK C terminal domain containing protein, expressed -
13 Sobic.003G238800 GDSL-like lipase/acylhydrolase, putative, expressed -
14 Sobic.003G319900 "domain confirmed by Pfam database, expressed in leaf and root"(PubMedID : 20499123)@OsGH3.1 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
15 Sobic.002G050700 tesmin/TSO1-like CXC domain containing protein, expressed -
16 Sobic.010G026100 expressed protein -
17 Sobic.008G114900 rhoGAP domain containing protein, expressed -
18 Sobic.002G255600 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
19 Sobic.001G496400 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
20 Sobic.010G119300 expressed protein -


Gene co-expression network
sample Sobic006G232900 Sobic006G232900 Sobic006G221800 Sobic006G221800 Sobic006G232900--Sobic006G221800 Sobic005G168400 Sobic005G168400 Sobic006G232900--Sobic005G168400 Sobic001G143400 Sobic001G143400 Sobic006G232900--Sobic001G143400 Sobic004G003700 Sobic004G003700 Sobic006G232900--Sobic004G003700 Sobic001G101700 Sobic001G101700 Sobic006G232900--Sobic001G101700 Sobic010G255000 Sobic010G255000 Sobic006G232900--Sobic010G255000 Sobic004G198100 Sobic004G198100 Sobic006G232900--Sobic004G198100 Sobic010G220800 Sobic010G220800 Sobic006G232900--Sobic010G220800 Sobic007G147200 Sobic007G147200 Sobic006G232900--Sobic007G147200 Sobic001G496400 Sobic001G496400 Sobic006G221800--Sobic001G496400 Sobic006G221800--Sobic001G101700 Sobic008G114900 Sobic008G114900 Sobic006G221800--Sobic008G114900 Sobic006G221800--Sobic004G003700 Sobic002G050700 Sobic002G050700 Sobic006G221800--Sobic002G050700 Sobic008G151600 Sobic008G151600 Sobic006G221800--Sobic008G151600 Sobic002G319300 Sobic002G319300 Sobic006G221800--Sobic002G319300 Sobic009G087700 Sobic009G087700 Sobic006G221800--Sobic009G087700 Sobic001G493900 Sobic001G493900 Sobic006G221800--Sobic001G493900 Sobic010G168700 Sobic010G168700 Sobic005G168400--Sobic010G168700 Sobic005G168400--Sobic001G143400 Sobic005G168400--Sobic004G003700 Sobic003G319900 Sobic003G319900 Sobic005G168400--Sobic003G319900 Sobic001G393200 Sobic001G393200 Sobic005G168400--Sobic001G393200 Sobic009G047500 Sobic009G047500 Sobic005G168400--Sobic009G047500 Sobic005G199700 Sobic005G199700 Sobic005G168400--Sobic005G199700 Sobic001G379900 Sobic001G379900 Sobic005G168400--Sobic001G379900 Sobic007G152300 Sobic007G152300 Sobic005G168400--Sobic007G152300 Sobic001G143400--Sobic004G003700 Sobic001G143400--Sobic010G168700 Sobic001G143400--Sobic005G168400 Sobic001G143400--Sobic007G147200 Sobic010G070900 Sobic010G070900 Sobic001G143400--Sobic010G070900 Sobic001G143400--Sobic009G047500 Sobic001G143400--Sobic005G199700 Sobic008G138000 Sobic008G138000 Sobic001G143400--Sobic008G138000 Sobic007G209200 Sobic007G209200 Sobic001G143400--Sobic007G209200 Sobic004G003700--Sobic001G143400 Sobic004G003700--Sobic007G209200 Sobic004G003700--Sobic010G168700 Sobic004G003700--Sobic007G147200 Sobic004G003700--Sobic006G221800 Sobic004G003700--Sobic009G047500 Sobic004G003700--Sobic001G101700 Sobic004G003700--Sobic005G168400 Sobic004G003700--Sobic008G138000 Sobic001G101700--Sobic006G221800 Sobic001G101700--Sobic010G255000 Sobic001G101700--Sobic004G003700 Sobic001G101700--Sobic007G147200 Sobic007G201900 Sobic007G201900 Sobic001G101700--Sobic007G201900 Sobic001G101700--Sobic007G209200 Sobic001G101700--Sobic008G151600 Sobic009G057800 Sobic009G057800 Sobic001G101700--Sobic009G057800 Sobic001G101700--Sobic001G143400 Sobic010G255000--Sobic007G147200 Sobic010G255000--Sobic001G101700 Sobic010G255000--Sobic007G201900 Sobic003G046400 Sobic003G046400 Sobic010G255000--Sobic003G046400 Sobic002G255600 Sobic002G255600 Sobic010G255000--Sobic002G255600 Sobic007G137101 Sobic007G137101 Sobic010G255000--Sobic007G137101 Sobic001G106500 Sobic001G106500 Sobic010G255000--Sobic001G106500 Sobic007G121200 Sobic007G121200 Sobic010G255000--Sobic007G121200 Sobic010G255000--Sobic010G220800 Sobic003G260700 Sobic003G260700 Sobic004G198100--Sobic003G260700 Sobic010G119300 Sobic010G119300 Sobic004G198100--Sobic010G119300 Sobic001G398400 Sobic001G398400 Sobic004G198100--Sobic001G398400 Sobic008G125700 Sobic008G125700 Sobic004G198100--Sobic008G125700 Sobic004G257600 Sobic004G257600 Sobic004G198100--Sobic004G257600 Sobic001G170800 Sobic001G170800 Sobic004G198100--Sobic001G170800 Sobic004G339500 Sobic004G339500 Sobic004G198100--Sobic004G339500 Sobic002G313000 Sobic002G313000 Sobic004G198100--Sobic002G313000 Sobic004G271300 Sobic004G271300 Sobic004G198100--Sobic004G271300 Sobic001G313800 Sobic001G313800 Sobic010G220800--Sobic001G313800 Sobic004G254300 Sobic004G254300 Sobic010G220800--Sobic004G254300 Sobic007G218400 Sobic007G218400 Sobic010G220800--Sobic007G218400 Sobic002G268300 Sobic002G268300 Sobic010G220800--Sobic002G268300 Sobic010G169200 Sobic010G169200 Sobic010G220800--Sobic010G169200 Sobic009G059800 Sobic009G059800 Sobic010G220800--Sobic009G059800 Sobic009G059932 Sobic009G059932 Sobic010G220800--Sobic009G059932 Sobic009G059866 Sobic009G059866 Sobic010G220800--Sobic009G059866 Sobic002G102800 Sobic002G102800 Sobic010G220800--Sobic002G102800 Sobic007G147200--Sobic010G070900 Sobic007G147200--Sobic010G255000 Sobic007G147200--Sobic004G003700 Sobic007G147200--Sobic003G046400 Sobic006G163300 Sobic006G163300 Sobic007G147200--Sobic006G163300 Sobic007G147200--Sobic001G143400 Sobic003G019900 Sobic003G019900 Sobic007G147200--Sobic003G019900 Sobic006G107500 Sobic006G107500 Sobic007G147200--Sobic006G107500 Sobic007G147200--Sobic001G101700
Octagon: transcription factors


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