Gene annotation
Transcriptome id Sobic.010G119300.1
Synonym Sb10g010530
Functional annotation expressed protein
UniProt C5Z8X6
Pfam PF00069 PF00139
Panther DB PTHR27007 PTHR27007:SF21
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G55830 : Concanavalin A-like lectin protein kinase family protein
RAP-DB (Rice) LOC_Os06g17490.1 : expressed protein
MaizeGDB (Corn) Zm00025a016070 , Zm00025a025091 , Zm00025a042750 , Zm00025a048283 , Zm00025a023535 , Zm00025a023581 , Zm00025a035871 , Zm00025a033822 , Zm00025a004289
Brachypodium KQK22738 , PNT68408 , KQJ98144 , KQJ98961 , KQK18589
Barley HORVU4Hr1G065620.3 , HORVU4Hr1G065620.1 , HORVU7Hr1G043490.1 , HORVU6Hr1G052910.5 , HORVU0Hr1G020280.2 , HORVU0Hr1G020280.3 , HORVU0Hr1G020280.1 , HORVU6Hr1G052910.2 , HORVU6Hr1G052910.4 , HORVU5Hr1G001730.3 , HORVU5Hr1G001730.1 , HORVU7Hr1G072690.1 , HORVU7Hr1G072690.3 , HORVU7Hr1G072690.2
Wheat TraesCS5A02G013100 , TraesCS2B02G138400 , TraesCSU02G152100 , TraesCS7D02G248200 , TraesCS7A02G249400 , TraesCS3B02G192500 , TraesCS7B02G142000 , TraesCS7B02G141900 , TraesCS2B02G623700 , TraesCS2B02G623700 , TraesCSU02G203100 , TraesCSU02G179900 , TraesCSU02G187400 , TraesCS2D02G116700 , TraesCS7A02G249300 , TraesCS4D02G235800 , TraesCS2B02G623900 , TraesCS7A02G249200 , TraesCS4A02G059000 , TraesCS2A02G562800 , TraesCS7D02G248100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G125700 similar to F22D16.26 protein(PubMedID : 29862293)@CSLD4 - cellulose synthase-like family D, expressed K00770: 1,4-beta-D-xylan synthase
2 Sobic.008G006800 inactive receptor kinase At2g26730 precursor, putative, expressed -
3 Sobic.003G260700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
4 Sobic.004G198100 expressed protein -
5 Sobic.003G102000 expressed protein -
6 Sobic.005G005700 inactive receptor kinase At2g26730 precursor, putative, expressed -
7 Sobic.004G339500 kinesin motor domain containing protein, putative, expressed -
8 Sobic.008G114900 rhoGAP domain containing protein, expressed -
9 Sobic.001G398400 expressed protein -
10 Sobic.001G170800 "Transport protein(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659835)@transport protein-related, putative, expressed -
11 Sobic.003G387700 expressed protein -
12 Sobic.004G257600 zinc finger family protein, putative, expressed K18932: palmitoyltransferase
13 Sobic.002G313000 targeting protein-related, putative, expressed K16812: targeting protein for Xklp2
14 Sobic.010G129700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
15 Sobic.001G477400 AUXIN SIGNALING F-BOX 2, putative, expressed -
16 Sobic.001G091500 expressed protein -
17 Sobic.004G271300 DNA topoisomerase 2, putative, expressed K03164: DNA topoisomerase II
18 Sobic.001G496400 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
19 Sobic.006G221800 OsFBX46 - F-box domain containing protein, expressed -
20 Sobic.003G328500 Expressed in younger stem(PubMedID : 28649278)@cyclin, putative, expressed K05868: G2/mitotic-specific cyclin-B1


Gene co-expression network
sample Sobic010G119300 Sobic010G119300 Sobic008G125700 Sobic008G125700 Sobic010G119300--Sobic008G125700 Sobic008G006800 Sobic008G006800 Sobic010G119300--Sobic008G006800 Sobic003G260700 Sobic003G260700 Sobic010G119300--Sobic003G260700 Sobic004G198100 Sobic004G198100 Sobic010G119300--Sobic004G198100 Sobic003G102000 Sobic003G102000 Sobic010G119300--Sobic003G102000 Sobic005G005700 Sobic005G005700 Sobic010G119300--Sobic005G005700 Sobic004G339500 Sobic004G339500 Sobic010G119300--Sobic004G339500 Sobic008G114900 Sobic008G114900 Sobic010G119300--Sobic008G114900 Sobic001G398400 Sobic001G398400 Sobic010G119300--Sobic001G398400 Sobic008G125700--Sobic010G119300 Sobic008G125700--Sobic008G114900 Sobic008G125700--Sobic003G102000 Sobic008G125700--Sobic003G260700 Sobic008G125700--Sobic004G198100 Sobic008G125700--Sobic008G006800 Sobic002G313000 Sobic002G313000 Sobic008G125700--Sobic002G313000 Sobic008G125700--Sobic004G339500 Sobic005G199700 Sobic005G199700 Sobic008G125700--Sobic005G199700 Sobic008G006800--Sobic005G005700 Sobic008G006800--Sobic010G119300 Sobic008G006800--Sobic003G260700 Sobic008G006800--Sobic001G398400 Sobic008G006800--Sobic004G339500 Sobic010G017400 Sobic010G017400 Sobic008G006800--Sobic010G017400 Sobic004G271300 Sobic004G271300 Sobic008G006800--Sobic004G271300 Sobic008G006800--Sobic002G313000 Sobic002G296000 Sobic002G296000 Sobic008G006800--Sobic002G296000 Sobic001G170800 Sobic001G170800 Sobic003G260700--Sobic001G170800 Sobic004G257600 Sobic004G257600 Sobic003G260700--Sobic004G257600 Sobic003G260700--Sobic004G339500 Sobic003G260700--Sobic001G398400 Sobic003G260700--Sobic004G198100 Sobic003G260700--Sobic004G271300 Sobic003G260700--Sobic008G006800 Sobic001G177900 Sobic001G177900 Sobic003G260700--Sobic001G177900 Sobic003G260700--Sobic002G313000 Sobic004G198100--Sobic003G260700 Sobic004G198100--Sobic010G119300 Sobic004G198100--Sobic001G398400 Sobic004G198100--Sobic008G125700 Sobic004G198100--Sobic004G257600 Sobic004G198100--Sobic001G170800 Sobic004G198100--Sobic004G339500 Sobic004G198100--Sobic002G313000 Sobic004G198100--Sobic004G271300 Sobic003G102000--Sobic008G125700 Sobic003G102000--Sobic003G260700 Sobic003G102000--Sobic010G119300 Sobic003G102000--Sobic004G339500 Sobic003G102000--Sobic008G114900 Sobic003G102000--Sobic004G257600 Sobic003G102000--Sobic004G198100 Sobic003G102000--Sobic008G006800 Sobic003G102000--Sobic002G313000 Sobic005G005700--Sobic008G006800 Sobic005G005700--Sobic004G271300 Sobic005G005700--Sobic010G017400 Sobic005G005700--Sobic002G296000 Sobic005G005700--Sobic001G398400 Sobic005G005700--Sobic010G119300 Sobic005G005700--Sobic003G260700 Sobic007G027900 Sobic007G027900 Sobic005G005700--Sobic007G027900 Sobic007G168900 Sobic007G168900 Sobic005G005700--Sobic007G168900 Sobic004G339500--Sobic003G260700 Sobic004G339500--Sobic008G006800 Sobic004G339500--Sobic001G170800 Sobic004G339500--Sobic001G177900 Sobic004G339500--Sobic010G119300 Sobic004G339500--Sobic003G102000 Sobic004G339500--Sobic004G198100 Sobic004G339500--Sobic008G125700 Sobic004G339500--Sobic005G005700 Sobic008G114900--Sobic008G125700 Sobic008G114900--Sobic002G313000 Sobic001G155700 Sobic001G155700 Sobic008G114900--Sobic001G155700 Sobic008G114900--Sobic010G119300 Sobic006G219500 Sobic006G219500 Sobic008G114900--Sobic006G219500 Sobic002G319300 Sobic002G319300 Sobic008G114900--Sobic002G319300 Sobic008G114900--Sobic003G260700 Sobic001G493900 Sobic001G493900 Sobic008G114900--Sobic001G493900 Sobic008G114900--Sobic008G006800 Sobic001G398400--Sobic003G260700 Sobic001G398400--Sobic001G170800 Sobic001G398400--Sobic008G006800 Sobic009G184200 Sobic009G184200 Sobic001G398400--Sobic009G184200 Sobic001G398400--Sobic004G271300 Sobic001G398400--Sobic005G005700 Sobic010G105400 Sobic010G105400 Sobic001G398400--Sobic010G105400 Sobic001G398400--Sobic004G198100 Sobic001G398400--Sobic004G257600
Octagon: transcription factors


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