Gene annotation
Transcriptome id Sobic.001G091500.1
Synonym Sb01g008240
Functional annotation expressed protein
UniProt C5X161
Pfam PF04622
Panther DB PTHR10868 PTHR10868:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006869; lipid transport


Orthologs (automatic annotation)
TAIR AT1G05440 : C-8 sterol isomerases
RAP-DB (Rice) LOC_Os03g53580.1 : expressed protein
MaizeGDB (Corn) Zm00025a008131
Brachypodium KQK13236
Barley HORVU5Hr1G094620.1
Wheat TraesCS5A02G385200 , TraesCS5D02G395200 , TraesCS5B02G390200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G426800 zinc finger, C3HC4 type domain containing protein, expressed -
2 Sobic.003G387700 expressed protein -
3 Sobic.009G120700 microtubule-binding protein TANGLED1, putative, expressed K18636: microtubule-binding protein TANGLED1
4 Sobic.003G260700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
5 Sobic.004G047100 EH domain-containing protein 1, putative, expressed K12483: EH domain-containing protein 1
6 Sobic.002G222500 lysM domain-containing GPI-anchored protein precursor, putative, expressed -
7 Sobic.004G339500 kinesin motor domain containing protein, putative, expressed -
8 Sobic.010G119300 expressed protein -
9 Sobic.004G198100 expressed protein -
10 Sobic.003G102000 expressed protein -
11 Sobic.004G257600 zinc finger family protein, putative, expressed K18932: palmitoyltransferase
12 Sobic.003G328500 Expressed in younger stem(PubMedID : 28649278)@cyclin, putative, expressed K05868: G2/mitotic-specific cyclin-B1
13 Sobic.001G170800 "Transport protein(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659835)@transport protein-related, putative, expressed -
14 Sobic.001G230300 shugoshin-1, putative, expressed -
15 Sobic.008G125700 similar to F22D16.26 protein(PubMedID : 29862293)@CSLD4 - cellulose synthase-like family D, expressed K00770: 1,4-beta-D-xylan synthase
16 Sobic.010G105400 chromosome condensation protein like, putative, expressed K06678: YCG1, condensin complex subunit 3
17 Sobic.003G084100 expressed protein -
18 Sobic.007G100600 plastocyanin-like domain containing protein, putative, expressed -
19 Sobic.004G063600 CYPRO4, putative, expressed -
20 Sobic.001G398400 expressed protein -


Gene co-expression network
sample Sobic001G091500 Sobic001G091500 Sobic002G426800 Sobic002G426800 Sobic001G091500--Sobic002G426800 Sobic003G387700 Sobic003G387700 Sobic001G091500--Sobic003G387700 Sobic009G120700 Sobic009G120700 Sobic001G091500--Sobic009G120700 Sobic003G260700 Sobic003G260700 Sobic001G091500--Sobic003G260700 Sobic004G047100 Sobic004G047100 Sobic001G091500--Sobic004G047100 Sobic002G222500 Sobic002G222500 Sobic001G091500--Sobic002G222500 Sobic004G339500 Sobic004G339500 Sobic001G091500--Sobic004G339500 Sobic010G119300 Sobic010G119300 Sobic001G091500--Sobic010G119300 Sobic004G198100 Sobic004G198100 Sobic001G091500--Sobic004G198100 Sobic009G181500 Sobic009G181500 Sobic002G426800--Sobic009G181500 Sobic002G426800--Sobic001G091500 Sobic005G144600 Sobic005G144600 Sobic002G426800--Sobic005G144600 Sobic002G426800--Sobic004G047100 Sobic002G426800--Sobic003G260700 Sobic001G078600 Sobic001G078600 Sobic002G426800--Sobic001G078600 Sobic003G314900 Sobic003G314900 Sobic002G426800--Sobic003G314900 Sobic003G444100 Sobic003G444100 Sobic002G426800--Sobic003G444100 Sobic010G105400 Sobic010G105400 Sobic002G426800--Sobic010G105400 Sobic004G257600 Sobic004G257600 Sobic003G387700--Sobic004G257600 Sobic006G134200 Sobic006G134200 Sobic003G387700--Sobic006G134200 Sobic003G387700--Sobic010G105400 Sobic003G387700--Sobic001G091500 Sobic001G105800 Sobic001G105800 Sobic003G387700--Sobic001G105800 Sobic003G387700--Sobic010G119300 Sobic001G398400 Sobic001G398400 Sobic003G387700--Sobic001G398400 Sobic003G328500 Sobic003G328500 Sobic003G387700--Sobic003G328500 Sobic007G100600 Sobic007G100600 Sobic003G387700--Sobic007G100600 Sobic009G120700--Sobic001G091500 Sobic009G120700--Sobic010G119300 Sobic003G102000 Sobic003G102000 Sobic009G120700--Sobic003G102000 Sobic009G120700--Sobic003G328500 Sobic009G120700--Sobic003G387700 Sobic009G120700--Sobic002G426800 Sobic009G120700--Sobic007G100600 Sobic001G230300 Sobic001G230300 Sobic009G120700--Sobic001G230300 Sobic007G132900 Sobic007G132900 Sobic009G120700--Sobic007G132900 Sobic001G170800 Sobic001G170800 Sobic003G260700--Sobic001G170800 Sobic003G260700--Sobic004G257600 Sobic003G260700--Sobic004G339500 Sobic003G260700--Sobic001G398400 Sobic003G260700--Sobic004G198100 Sobic004G271300 Sobic004G271300 Sobic003G260700--Sobic004G271300 Sobic008G006800 Sobic008G006800 Sobic003G260700--Sobic008G006800 Sobic001G177900 Sobic001G177900 Sobic003G260700--Sobic001G177900 Sobic002G313000 Sobic002G313000 Sobic003G260700--Sobic002G313000 Sobic004G047100--Sobic010G105400 Sobic004G047100--Sobic005G144600 Sobic004G047100--Sobic009G181500 Sobic002G246900 Sobic002G246900 Sobic004G047100--Sobic002G246900 Sobic004G047100--Sobic002G426800 Sobic003G179500 Sobic003G179500 Sobic004G047100--Sobic003G179500 Sobic004G047100--Sobic001G091500 Sobic006G116500 Sobic006G116500 Sobic004G047100--Sobic006G116500 Sobic004G047100--Sobic003G387700 Sobic002G222500--Sobic001G091500 Sobic008G114900 Sobic008G114900 Sobic002G222500--Sobic008G114900 Sobic010G269700 Sobic010G269700 Sobic002G222500--Sobic010G269700 Sobic002G222500--Sobic003G387700 Sobic010G241100 Sobic010G241100 Sobic002G222500--Sobic010G241100 Sobic002G222500--Sobic003G444100 Sobic004G313200 Sobic004G313200 Sobic002G222500--Sobic004G313200 Sobic006G219500 Sobic006G219500 Sobic002G222500--Sobic006G219500 Sobic003G032200 Sobic003G032200 Sobic002G222500--Sobic003G032200 Sobic004G339500--Sobic003G260700 Sobic004G339500--Sobic008G006800 Sobic004G339500--Sobic001G170800 Sobic004G339500--Sobic001G177900 Sobic004G339500--Sobic010G119300 Sobic004G339500--Sobic003G102000 Sobic004G339500--Sobic004G198100 Sobic008G125700 Sobic008G125700 Sobic004G339500--Sobic008G125700 Sobic005G005700 Sobic005G005700 Sobic004G339500--Sobic005G005700 Sobic010G119300--Sobic008G125700 Sobic010G119300--Sobic008G006800 Sobic010G119300--Sobic003G260700 Sobic010G119300--Sobic004G198100 Sobic010G119300--Sobic003G102000 Sobic010G119300--Sobic005G005700 Sobic010G119300--Sobic004G339500 Sobic010G119300--Sobic008G114900 Sobic010G119300--Sobic001G398400 Sobic004G198100--Sobic003G260700 Sobic004G198100--Sobic010G119300 Sobic004G198100--Sobic001G398400 Sobic004G198100--Sobic008G125700 Sobic004G198100--Sobic004G257600 Sobic004G198100--Sobic001G170800 Sobic004G198100--Sobic004G339500 Sobic004G198100--Sobic002G313000 Sobic004G198100--Sobic004G271300
Octagon: transcription factors


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