Gene annotation
Transcriptome id Sobic.004G047100.1
Synonym EHD1, ATEHD1, Sb04g004020
Functional annotation EH domain-containing protein 1, putative, expressed
UniProt A0A1Z5RKZ2
Pfam PF12763 PF00350 PF16880
Panther DB PTHR11216 PTHR11216:SF83
NCBI CDD -
KEGG Orthology K12483; EH domain-containing protein 1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G20290 : EPS15 homology domain 1
RAP-DB (Rice) LOC_Os02g06340.1 : EH domain-containing protein 1, putative, expressed
MaizeGDB (Corn) Zm00025a018206 , Zm00025a021323 , Zm00025a034863 , Zm00025a049381
Brachypodium KQJ93413 , KQK17260 , PNT65921
Barley HORVU7Hr1G100500.12 , HORVU7Hr1G100500.11 , HORVU7Hr1G100500.10 , HORVU7Hr1G100500.8 , HORVU7Hr1G100500.7 , HORVU7Hr1G100500.6 , HORVU7Hr1G100500.5 , HORVU7Hr1G100500.4 , HORVU7Hr1G100500.3 , HORVU7Hr1G100500.2 , HORVU7Hr1G100500.1 , HORVU0Hr1G015420.10 , HORVU0Hr1G015420.11 , HORVU0Hr1G015420.12 , HORVU0Hr1G015420.13 , HORVU0Hr1G015420.14 , HORVU0Hr1G015420.15 , HORVU0Hr1G015420.16 , HORVU0Hr1G015420.17 , HORVU0Hr1G015420.18 , HORVU0Hr1G015420.19 , HORVU7Hr1G060580.1 , HORVU0Hr1G015420.2 , HORVU0Hr1G015420.3 , HORVU0Hr1G015420.6 , HORVU0Hr1G015420.7 , HORVU0Hr1G015420.4 , HORVU0Hr1G015420.5 , HORVU0Hr1G015420.8 , HORVU0Hr1G015420.9 , HORVU0Hr1G015420.25 , HORVU0Hr1G015420.24 , HORVU0Hr1G015420.27 , HORVU0Hr1G015420.26 , HORVU0Hr1G015420.21 , HORVU0Hr1G015420.23 , HORVU0Hr1G015420.22
Wheat TraesCS6D02G121200 , TraesCS7D02G430800 , TraesCS6B02G159700 , TraesCS7B02G340200 , TraesCS7B02G340200 , TraesCS6A02G131300 , TraesCS6A02G131300 , TraesCS7A02G441500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G105400 chromosome condensation protein like, putative, expressed K06678: YCG1, condensin complex subunit 3
2 Sobic.005G144600 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
3 Sobic.009G181500 Up-reguralion under heat(PubMedID : 24916767)@cyclin, putative, expressed -
4 Sobic.002G246900 expressed protein -
5 Sobic.002G426800 zinc finger, C3HC4 type domain containing protein, expressed -
6 Sobic.003G179500 expressed protein K06676: BRRN1, BRN1, condensin complex subunit 2
7 Sobic.001G091500 expressed protein -
8 Sobic.006G116500 expressed protein -
9 Sobic.003G387700 expressed protein -
10 Sobic.010G191000 expressed protein -
11 Sobic.005G000500 kinesin motor domain containing protein, putative, expressed K10398: KIF11, kinesin family member 11
12 Sobic.002G223900 OsFBX330 - F-box domain containing protein, expressed -
13 Sobic.003G008700 MYB family transcription factor, putative, expressed -
14 Sobic.006G134200 expressed protein -
15 Sobic.006G102900 expressed protein -
16 Sobic.003G444100 "OsCCS52B(Ortholog in rice:Su’udi et al., 2012)"(PubMedID : 31659875)@WD repeat-containing protein, putative, expressed K03364: cell division cycle 20-like protein 1, cofactor of APC complex
17 Sobic.003G107200 SNF7 domain containing protein, putative, expressed K12198: CHMP5, charged multivesicular body protein 5
18 Sobic.001G070300 expressed protein -
19 Sobic.001G105800 OsFBX109 - F-box domain containing protein, expressed -
20 Sobic.001G289900 AT hook motif domain containing protein, expressed -


Gene co-expression network
sample Sobic004G047100 Sobic004G047100 Sobic010G105400 Sobic010G105400 Sobic004G047100--Sobic010G105400 Sobic005G144600 Sobic005G144600 Sobic004G047100--Sobic005G144600 Sobic009G181500 Sobic009G181500 Sobic004G047100--Sobic009G181500 Sobic002G246900 Sobic002G246900 Sobic004G047100--Sobic002G246900 Sobic002G426800 Sobic002G426800 Sobic004G047100--Sobic002G426800 Sobic003G179500 Sobic003G179500 Sobic004G047100--Sobic003G179500 Sobic001G091500 Sobic001G091500 Sobic004G047100--Sobic001G091500 Sobic006G116500 Sobic006G116500 Sobic004G047100--Sobic006G116500 Sobic003G387700 Sobic003G387700 Sobic004G047100--Sobic003G387700 Sobic010G105400--Sobic005G144600 Sobic010G105400--Sobic004G047100 Sobic009G184200 Sobic009G184200 Sobic010G105400--Sobic009G184200 Sobic005G000500 Sobic005G000500 Sobic010G105400--Sobic005G000500 Sobic001G398400 Sobic001G398400 Sobic010G105400--Sobic001G398400 Sobic010G105400--Sobic003G179500 Sobic006G124400 Sobic006G124400 Sobic010G105400--Sobic006G124400 Sobic007G168900 Sobic007G168900 Sobic010G105400--Sobic007G168900 Sobic002G204400 Sobic002G204400 Sobic010G105400--Sobic002G204400 Sobic005G144600--Sobic007G168900 Sobic005G144600--Sobic010G105400 Sobic003G294500 Sobic003G294500 Sobic005G144600--Sobic003G294500 Sobic005G144600--Sobic005G000500 Sobic003G314900 Sobic003G314900 Sobic005G144600--Sobic003G314900 Sobic001G177900 Sobic001G177900 Sobic005G144600--Sobic001G177900 Sobic005G144600--Sobic004G047100 Sobic004G271300 Sobic004G271300 Sobic005G144600--Sobic004G271300 Sobic005G144600--Sobic003G179500 Sobic009G181500--Sobic002G426800 Sobic009G181500--Sobic004G047100 Sobic010G051100 Sobic010G051100 Sobic009G181500--Sobic010G051100 Sobic006G035600 Sobic006G035600 Sobic009G181500--Sobic006G035600 Sobic009G181500--Sobic005G144600 Sobic010G274000 Sobic010G274000 Sobic009G181500--Sobic010G274000 Sobic006G102900 Sobic006G102900 Sobic009G181500--Sobic006G102900 Sobic001G070300 Sobic001G070300 Sobic009G181500--Sobic001G070300 Sobic009G181500--Sobic003G294500 Sobic002G246900--Sobic004G047100 Sobic002G246900--Sobic010G105400 Sobic010G191000 Sobic010G191000 Sobic002G246900--Sobic010G191000 Sobic003G107200 Sobic003G107200 Sobic002G246900--Sobic003G107200 Sobic001G238900 Sobic001G238900 Sobic002G246900--Sobic001G238900 Sobic002G246900--Sobic009G181500 Sobic002G236700 Sobic002G236700 Sobic002G246900--Sobic002G236700 Sobic001G169800 Sobic001G169800 Sobic002G246900--Sobic001G169800 Sobic002G230800 Sobic002G230800 Sobic002G246900--Sobic002G230800 Sobic002G426800--Sobic009G181500 Sobic002G426800--Sobic001G091500 Sobic002G426800--Sobic005G144600 Sobic002G426800--Sobic004G047100 Sobic003G260700 Sobic003G260700 Sobic002G426800--Sobic003G260700 Sobic001G078600 Sobic001G078600 Sobic002G426800--Sobic001G078600 Sobic002G426800--Sobic003G314900 Sobic003G444100 Sobic003G444100 Sobic002G426800--Sobic003G444100 Sobic002G426800--Sobic010G105400 Sobic003G183700 Sobic003G183700 Sobic003G179500--Sobic003G183700 Sobic010G103700 Sobic010G103700 Sobic003G179500--Sobic010G103700 Sobic003G179500--Sobic010G105400 Sobic003G179500--Sobic005G144600 Sobic010G147700 Sobic010G147700 Sobic003G179500--Sobic010G147700 Sobic009G087000 Sobic009G087000 Sobic003G179500--Sobic009G087000 Sobic005G110535 Sobic005G110535 Sobic003G179500--Sobic005G110535 Sobic003G179500--Sobic006G116500 Sobic003G179500--Sobic004G047100 Sobic001G091500--Sobic002G426800 Sobic001G091500--Sobic003G387700 Sobic009G120700 Sobic009G120700 Sobic001G091500--Sobic009G120700 Sobic001G091500--Sobic003G260700 Sobic001G091500--Sobic004G047100 Sobic002G222500 Sobic002G222500 Sobic001G091500--Sobic002G222500 Sobic004G339500 Sobic004G339500 Sobic001G091500--Sobic004G339500 Sobic010G119300 Sobic010G119300 Sobic001G091500--Sobic010G119300 Sobic004G198100 Sobic004G198100 Sobic001G091500--Sobic004G198100 Sobic001G456500 Sobic001G456500 Sobic006G116500--Sobic001G456500 Sobic004G355500 Sobic004G355500 Sobic006G116500--Sobic004G355500 Sobic006G116500--Sobic001G169800 Sobic006G116500--Sobic001G070300 Sobic006G116500--Sobic003G179500 Sobic008G129200 Sobic008G129200 Sobic006G116500--Sobic008G129200 Sobic002G223900 Sobic002G223900 Sobic006G116500--Sobic002G223900 Sobic004G331600 Sobic004G331600 Sobic006G116500--Sobic004G331600 Sobic006G116500--Sobic004G047100 Sobic004G257600 Sobic004G257600 Sobic003G387700--Sobic004G257600 Sobic006G134200 Sobic006G134200 Sobic003G387700--Sobic006G134200 Sobic003G387700--Sobic010G105400 Sobic003G387700--Sobic001G091500 Sobic001G105800 Sobic001G105800 Sobic003G387700--Sobic001G105800 Sobic003G387700--Sobic010G119300 Sobic003G387700--Sobic001G398400 Sobic003G328500 Sobic003G328500 Sobic003G387700--Sobic003G328500 Sobic007G100600 Sobic007G100600 Sobic003G387700--Sobic007G100600
Octagon: transcription factors


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