Gene annotation
Transcriptome id Sobic.006G102900.1
Synonym Sb06g018640
Functional annotation expressed protein
UniProt C5Y9Q8
Pfam PF13266
Panther DB PTHR31132 PTHR31132:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G39860 : -
RAP-DB (Rice) LOC_Os04g38310.1 : expressed protein
MaizeGDB (Corn) Zm00025a011148 , Zm00025a056181
Brachypodium -
Barley HORVU2Hr1G079780.14 , HORVU2Hr1G079780.13 , HORVU2Hr1G079780.12 , HORVU2Hr1G079780.11 , HORVU2Hr1G079780.10 , HORVU2Hr1G079780.9 , HORVU2Hr1G079780.8 , HORVU2Hr1G079780.7 , HORVU2Hr1G079780.6 , HORVU2Hr1G079780.5 , HORVU2Hr1G079780.4 , HORVU2Hr1G079780.3 , HORVU2Hr1G079780.2 , HORVU2Hr1G079780.1
Wheat TraesCS2A02G341500 , TraesCS2B02G339200 , TraesCS2B02G339200 , TraesCS2D02G319200
Populus -


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cDNA sequences
Sobic.006G102900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G078600 CAMK_CAMK_like_Aur_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
2 Sobic.003G107200 SNF7 domain containing protein, putative, expressed K12198: CHMP5, charged multivesicular body protein 5
3 Sobic.009G181500 Up-reguralion under heat(PubMedID : 24916767)@cyclin, putative, expressed -
4 Sobic.001G261549 - -
5 Sobic.007G154500 F-box protein, putative, expressed -
6 Sobic.002G426800 zinc finger, C3HC4 type domain containing protein, expressed -
7 Sobic.010G274000 cyclin, putative, expressed K05868: G2/mitotic-specific cyclin-B1
8 Sobic.004G047100 EH domain-containing protein 1, putative, expressed K12483: EH domain-containing protein 1
9 Sobic.009G189200 secretory carrier-associated membrane protein, putative, expressed -
10 Sobic.001G078700 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
11 Sobic.005G144600 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
12 Sobic.002G246900 expressed protein -
13 Sobic.010G051100 OsPDIL1-5 protein disulfide isomerase PDIL1-5, expressed K09580: PDIA1, protein disulfide-isomerase A1
14 Sobic.004G285900 HMG1/2, putative, expressed -
15 Sobic.010G191000 expressed protein -
16 Sobic.001G401600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyltransferase, putative, expressed K08238: xyloglucan 6-xylosyltransferase
17 Sobic.003G179500 expressed protein K06676: BRRN1, BRN1, condensin complex subunit 2
18 Sobic.003G034600 CAMK_CAMK_like_Aur_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
19 Sobic.009G194900 glucan endo-1,3-beta-glucosidase-like protein 3 precursor, putative, expressed -
20 Sobic.010G105400 chromosome condensation protein like, putative, expressed K06678: YCG1, condensin complex subunit 3


Gene co-expression network
sample Sobic006G102900 Sobic006G102900 Sobic001G078600 Sobic001G078600 Sobic006G102900--Sobic001G078600 Sobic003G107200 Sobic003G107200 Sobic006G102900--Sobic003G107200 Sobic009G181500 Sobic009G181500 Sobic006G102900--Sobic009G181500 Sobic001G261549 Sobic001G261549 Sobic006G102900--Sobic001G261549 Sobic007G154500 Sobic007G154500 Sobic006G102900--Sobic007G154500 Sobic002G426800 Sobic002G426800 Sobic006G102900--Sobic002G426800 Sobic010G274000 Sobic010G274000 Sobic006G102900--Sobic010G274000 Sobic004G047100 Sobic004G047100 Sobic006G102900--Sobic004G047100 Sobic009G189200 Sobic009G189200 Sobic006G102900--Sobic009G189200 Sobic001G078600--Sobic006G102900 Sobic001G078600--Sobic002G426800 Sobic001G078600--Sobic010G274000 Sobic005G144600 Sobic005G144600 Sobic001G078600--Sobic005G144600 Sobic004G197400 Sobic004G197400 Sobic001G078600--Sobic004G197400 Sobic004G285900 Sobic004G285900 Sobic001G078600--Sobic004G285900 Sobic006G116500 Sobic006G116500 Sobic001G078600--Sobic006G116500 Sobic001G528600 Sobic001G528600 Sobic001G078600--Sobic001G528600 Sobic001G078600--Sobic007G154500 Sobic003G107200--Sobic006G102900 Sobic002G246900 Sobic002G246900 Sobic003G107200--Sobic002G246900 Sobic003G107200--Sobic004G047100 Sobic003G107200--Sobic009G181500 Sobic003G107200--Sobic001G261549 Sobic003G107200--Sobic007G154500 Sobic003G107200--Sobic001G078600 Sobic002G236700 Sobic002G236700 Sobic003G107200--Sobic002G236700 Sobic003G107200--Sobic002G426800 Sobic009G181500--Sobic002G426800 Sobic009G181500--Sobic004G047100 Sobic010G051100 Sobic010G051100 Sobic009G181500--Sobic010G051100 Sobic006G035600 Sobic006G035600 Sobic009G181500--Sobic006G035600 Sobic009G181500--Sobic005G144600 Sobic009G181500--Sobic010G274000 Sobic009G181500--Sobic006G102900 Sobic001G070300 Sobic001G070300 Sobic009G181500--Sobic001G070300 Sobic003G294500 Sobic003G294500 Sobic009G181500--Sobic003G294500 Sobic001G261549--Sobic006G102900 Sobic001G261549--Sobic004G285900 Sobic001G261549--Sobic009G189200 Sobic006G191700 Sobic006G191700 Sobic001G261549--Sobic006G191700 Sobic009G194900 Sobic009G194900 Sobic001G261549--Sobic009G194900 Sobic001G261549--Sobic003G107200 Sobic001G261549--Sobic001G078600 Sobic001G261549--Sobic007G154500 Sobic008G096200 Sobic008G096200 Sobic001G261549--Sobic008G096200 Sobic007G154500--Sobic006G102900 Sobic007G154500--Sobic001G078600 Sobic007G154500--Sobic002G426800 Sobic002G146601 Sobic002G146601 Sobic007G154500--Sobic002G146601 Sobic007G154500--Sobic003G107200 Sobic007G154500--Sobic006G116500 Sobic007G154500--Sobic004G047100 Sobic007G154500--Sobic001G261549 Sobic007G154500--Sobic004G285900 Sobic002G426800--Sobic009G181500 Sobic001G091500 Sobic001G091500 Sobic002G426800--Sobic001G091500 Sobic002G426800--Sobic005G144600 Sobic002G426800--Sobic004G047100 Sobic003G260700 Sobic003G260700 Sobic002G426800--Sobic003G260700 Sobic002G426800--Sobic001G078600 Sobic003G314900 Sobic003G314900 Sobic002G426800--Sobic003G314900 Sobic003G444100 Sobic003G444100 Sobic002G426800--Sobic003G444100 Sobic010G105400 Sobic010G105400 Sobic002G426800--Sobic010G105400 Sobic010G274000--Sobic001G070300 Sobic010G274000--Sobic009G181500 Sobic010G274000--Sobic005G144600 Sobic002G191000 Sobic002G191000 Sobic010G274000--Sobic002G191000 Sobic010G274000--Sobic001G078600 Sobic010G274000--Sobic004G197400 Sobic007G100600 Sobic007G100600 Sobic010G274000--Sobic007G100600 Sobic010G274000--Sobic006G102900 Sobic010G274000--Sobic006G116500 Sobic004G047100--Sobic010G105400 Sobic004G047100--Sobic005G144600 Sobic004G047100--Sobic009G181500 Sobic004G047100--Sobic002G246900 Sobic004G047100--Sobic002G426800 Sobic003G179500 Sobic003G179500 Sobic004G047100--Sobic003G179500 Sobic004G047100--Sobic001G091500 Sobic004G047100--Sobic006G116500 Sobic003G387700 Sobic003G387700 Sobic004G047100--Sobic003G387700 Sobic009G189200--Sobic006G102900 Sobic009G189200--Sobic001G261549 Sobic002G057500 Sobic002G057500 Sobic009G189200--Sobic002G057500 Sobic010G144900 Sobic010G144900 Sobic009G189200--Sobic010G144900 Sobic007G044400 Sobic007G044400 Sobic009G189200--Sobic007G044400 Sobic009G189200--Sobic004G285900 Sobic003G084300 Sobic003G084300 Sobic009G189200--Sobic003G084300 Sobic003G122200 Sobic003G122200 Sobic009G189200--Sobic003G122200 Sobic001G131600 Sobic001G131600 Sobic009G189200--Sobic001G131600
Octagon: transcription factors


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