Gene annotation
Transcriptome id Sobic.010G274000.3,Sobic.010G274000.1,Sobic.010G274000.2
Synonym 3, Sb10g030790, CYCB2
Functional annotation cyclin, putative, expressed
UniProt C5Z2J1
Pfam PF02984 PF00134
Panther DB PTHR10177 PTHR10177:SF226
NCBI CDD KOG0653; Cyclin B and related kinase-activating proteins
KEGG Orthology K05868; G2/mitotic-specific cyclin-B1
Gene Ontology GO:0005634; nucleus


Orthologs (automatic annotation)
TAIR AT1G20610 : Cyclin B2;3
RAP-DB (Rice) LOC_Os06g51110.1,LOC_Os06g51110.2 : cyclin, putative, expressed
MaizeGDB (Corn) Zm00025a041695
Brachypodium KQK16664
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G070300 expressed protein -
2 Sobic.009G181500 Up-reguralion under heat(PubMedID : 24916767)@cyclin, putative, expressed -
3 Sobic.005G144600 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
4 Sobic.002G191000 STE_MEKK_ste11_MAP3K.2 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
5 Sobic.001G078600 CAMK_CAMK_like_Aur_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
6 Sobic.004G197400 expressed protein K00558: DNMT1, DNA (cytosine-5)-methyltransferase 1
7 Sobic.007G100600 plastocyanin-like domain containing protein, putative, expressed -
8 Sobic.006G102900 expressed protein -
9 Sobic.006G116500 expressed protein -
10 Sobic.003G179500 expressed protein K06676: BRRN1, BRN1, condensin complex subunit 2
11 Sobic.003G328500 Expressed in younger stem(PubMedID : 28649278)@cyclin, putative, expressed K05868: G2/mitotic-specific cyclin-B1
12 Sobic.001G103000 DNA binding protein, putative, expressed -
13 Sobic.006G144300 expressed protein -
14 Sobic.004G047100 EH domain-containing protein 1, putative, expressed K12483: EH domain-containing protein 1
15 Sobic.003G294500 dynamin family protein, putative, expressed -
16 Sobic.002G426800 zinc finger, C3HC4 type domain containing protein, expressed -
17 Sobic.009G208900 expressed protein -
18 Sobic.003G410600 exostosin family domain containing protein, expressed -
19 Sobic.010G003100 monocopper oxidase, putative, expressed -
20 Sobic.004G257600 zinc finger family protein, putative, expressed K18932: palmitoyltransferase


Gene co-expression network
sample Sobic010G274000 Sobic010G274000 Sobic001G070300 Sobic001G070300 Sobic010G274000--Sobic001G070300 Sobic009G181500 Sobic009G181500 Sobic010G274000--Sobic009G181500 Sobic005G144600 Sobic005G144600 Sobic010G274000--Sobic005G144600 Sobic002G191000 Sobic002G191000 Sobic010G274000--Sobic002G191000 Sobic001G078600 Sobic001G078600 Sobic010G274000--Sobic001G078600 Sobic004G197400 Sobic004G197400 Sobic010G274000--Sobic004G197400 Sobic007G100600 Sobic007G100600 Sobic010G274000--Sobic007G100600 Sobic006G102900 Sobic006G102900 Sobic010G274000--Sobic006G102900 Sobic006G116500 Sobic006G116500 Sobic010G274000--Sobic006G116500 Sobic001G070300--Sobic010G274000 Sobic001G070300--Sobic007G100600 Sobic001G070300--Sobic006G116500 Sobic001G070300--Sobic002G191000 Sobic001G070300--Sobic009G181500 Sobic001G070300--Sobic004G197400 Sobic001G070300--Sobic005G144600 Sobic001G142000 Sobic001G142000 Sobic001G070300--Sobic001G142000 Sobic004G047100 Sobic004G047100 Sobic001G070300--Sobic004G047100 Sobic002G426800 Sobic002G426800 Sobic009G181500--Sobic002G426800 Sobic009G181500--Sobic004G047100 Sobic010G051100 Sobic010G051100 Sobic009G181500--Sobic010G051100 Sobic006G035600 Sobic006G035600 Sobic009G181500--Sobic006G035600 Sobic009G181500--Sobic005G144600 Sobic009G181500--Sobic010G274000 Sobic009G181500--Sobic006G102900 Sobic009G181500--Sobic001G070300 Sobic003G294500 Sobic003G294500 Sobic009G181500--Sobic003G294500 Sobic007G168900 Sobic007G168900 Sobic005G144600--Sobic007G168900 Sobic010G105400 Sobic010G105400 Sobic005G144600--Sobic010G105400 Sobic005G144600--Sobic003G294500 Sobic005G000500 Sobic005G000500 Sobic005G144600--Sobic005G000500 Sobic003G314900 Sobic003G314900 Sobic005G144600--Sobic003G314900 Sobic001G177900 Sobic001G177900 Sobic005G144600--Sobic001G177900 Sobic005G144600--Sobic004G047100 Sobic004G271300 Sobic004G271300 Sobic005G144600--Sobic004G271300 Sobic003G179500 Sobic003G179500 Sobic005G144600--Sobic003G179500 Sobic003G118100 Sobic003G118100 Sobic002G191000--Sobic003G118100 Sobic002G191000--Sobic006G035600 Sobic002G191000--Sobic010G051100 Sobic001G029800 Sobic001G029800 Sobic002G191000--Sobic001G029800 Sobic010G008900 Sobic010G008900 Sobic002G191000--Sobic010G008900 Sobic002G191000--Sobic001G070300 Sobic002G191000--Sobic010G274000 Sobic004G271500 Sobic004G271500 Sobic002G191000--Sobic004G271500 Sobic002G191000--Sobic009G181500 Sobic001G078600--Sobic006G102900 Sobic001G078600--Sobic002G426800 Sobic001G078600--Sobic010G274000 Sobic001G078600--Sobic005G144600 Sobic001G078600--Sobic004G197400 Sobic004G285900 Sobic004G285900 Sobic001G078600--Sobic004G285900 Sobic001G078600--Sobic006G116500 Sobic001G528600 Sobic001G528600 Sobic001G078600--Sobic001G528600 Sobic007G154500 Sobic007G154500 Sobic001G078600--Sobic007G154500 Sobic004G197400--Sobic003G294500 Sobic004G197400--Sobic005G144600 Sobic001G456500 Sobic001G456500 Sobic004G197400--Sobic001G456500 Sobic004G197400--Sobic006G116500 Sobic004G197400--Sobic010G274000 Sobic004G197400--Sobic001G070300 Sobic004G197400--Sobic001G078600 Sobic004G355500 Sobic004G355500 Sobic004G197400--Sobic004G355500 Sobic010G147700 Sobic010G147700 Sobic004G197400--Sobic010G147700 Sobic007G100600--Sobic001G070300 Sobic004G257600 Sobic004G257600 Sobic007G100600--Sobic004G257600 Sobic003G387700 Sobic003G387700 Sobic007G100600--Sobic003G387700 Sobic003G328500 Sobic003G328500 Sobic007G100600--Sobic003G328500 Sobic007G100600--Sobic001G142000 Sobic010G003100 Sobic010G003100 Sobic007G100600--Sobic010G003100 Sobic006G134200 Sobic006G134200 Sobic007G100600--Sobic006G134200 Sobic002G255500 Sobic002G255500 Sobic007G100600--Sobic002G255500 Sobic007G100600--Sobic010G274000 Sobic006G102900--Sobic001G078600 Sobic003G107200 Sobic003G107200 Sobic006G102900--Sobic003G107200 Sobic006G102900--Sobic009G181500 Sobic001G261549 Sobic001G261549 Sobic006G102900--Sobic001G261549 Sobic006G102900--Sobic007G154500 Sobic006G102900--Sobic002G426800 Sobic006G102900--Sobic010G274000 Sobic006G102900--Sobic004G047100 Sobic009G189200 Sobic009G189200 Sobic006G102900--Sobic009G189200 Sobic006G116500--Sobic001G456500 Sobic006G116500--Sobic004G355500 Sobic001G169800 Sobic001G169800 Sobic006G116500--Sobic001G169800 Sobic006G116500--Sobic001G070300 Sobic006G116500--Sobic003G179500 Sobic008G129200 Sobic008G129200 Sobic006G116500--Sobic008G129200 Sobic002G223900 Sobic002G223900 Sobic006G116500--Sobic002G223900 Sobic004G331600 Sobic004G331600 Sobic006G116500--Sobic004G331600 Sobic006G116500--Sobic004G047100
Octagon: transcription factors


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