Gene annotation
Transcriptome id Sobic.001G103000.2
Synonym Sb01g009200
Functional annotation DNA binding protein, putative, expressed
UniProt C5WLY8
Pfam PF02485
Panther DB PTHR31042 PTHR31042:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0008375acetylglucosaminyltransferase activity


Orthologs (automatic annotation)
TAIR AT5G11730 : Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
RAP-DB (Rice) LOC_Os03g52120.1 : DNA binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a026612 , Zm00025a008016 , Zm00025a008014 , Zm00025a008015
Brachypodium KQK13377 , KQK13381
Barley HORVU3Hr1G081930.4 , HORVU3Hr1G081930.5 , HORVU3Hr1G081930.2 , HORVU3Hr1G081930.3 , HORVU4Hr1G010270.4 , HORVU4Hr1G010270.5 , HORVU4Hr1G010270.6 , HORVU4Hr1G010270.1 , HORVU4Hr1G010270.2 , HORVU4Hr1G010270.3
Wheat TraesCS5D02G015600 , TraesCS4B02G062000 , TraesCS3B02G478200 , TraesCS5B02G008600 , TraesCS5B02G008600 , TraesCS3B02G418600 , TraesCS4D02G061000 , TraesCS4A02G253400 , TraesCS3A02G386500 , TraesCS3D02G379500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G274000 cyclin, putative, expressed K05868: G2/mitotic-specific cyclin-B1
2 Sobic.004G355500 RPA2A - Putative single-stranded DNA binding complex subunit 2, expressed K10739: RFA2, replication factor A2
3 Sobic.002G191000 STE_MEKK_ste11_MAP3K.2 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
4 Sobic.007G139500 phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
5 Sobic.003G135400 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
6 Sobic.003G410600 exostosin family domain containing protein, expressed -
7 Sobic.004G197400 expressed protein K00558: DNMT1, DNA (cytosine-5)-methyltransferase 1
8 Sobic.007G152900 POLE2A - Putative DNA polymerase epsilon complex subunit, expressed K02325: DNA polymerase epsilon subunit 2
9 Sobic.006G116500 expressed protein -
10 Sobic.001G070300 expressed protein -
11 Sobic.003G294500 dynamin family protein, putative, expressed -
12 Sobic.010G003100 monocopper oxidase, putative, expressed -
13 Sobic.009G088200 -(PubMedID : 26976818)@triosephosphate/phosphate translocator(PubMedID : 27016024)@phosphate/phosphate translocator, putative, expressed K15283: solute carrier family 35, member E1
14 Sobic.003G179500 expressed protein K06676: BRRN1, BRN1, condensin complex subunit 2
15 Sobic.009G181500 Up-reguralion under heat(PubMedID : 24916767)@cyclin, putative, expressed -
16 Sobic.005G144600 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
17 Sobic.001G456500 RPA1B - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1
18 Sobic.010G147700 WD domain, G-beta repeat domain containing protein, expressed K11274: WDHD1, chromosome transmission fidelity protein 4
19 Sobic.003G420100 RNA recognition motif containing protein, putative, expressed K13207: CUGBP, BRUNOL, CUG-BP- and ETR3-like factor
20 Sobic.006G029300 expressed protein K15505: DNA repair protein RAD5


Gene co-expression network
sample Sobic001G103000 Sobic001G103000 Sobic010G274000 Sobic010G274000 Sobic001G103000--Sobic010G274000 Sobic004G355500 Sobic004G355500 Sobic001G103000--Sobic004G355500 Sobic002G191000 Sobic002G191000 Sobic001G103000--Sobic002G191000 Sobic007G139500 Sobic007G139500 Sobic001G103000--Sobic007G139500 Sobic003G135400 Sobic003G135400 Sobic001G103000--Sobic003G135400 Sobic003G410600 Sobic003G410600 Sobic001G103000--Sobic003G410600 Sobic004G197400 Sobic004G197400 Sobic001G103000--Sobic004G197400 Sobic007G152900 Sobic007G152900 Sobic001G103000--Sobic007G152900 Sobic006G116500 Sobic006G116500 Sobic001G103000--Sobic006G116500 Sobic001G070300 Sobic001G070300 Sobic010G274000--Sobic001G070300 Sobic009G181500 Sobic009G181500 Sobic010G274000--Sobic009G181500 Sobic005G144600 Sobic005G144600 Sobic010G274000--Sobic005G144600 Sobic010G274000--Sobic002G191000 Sobic001G078600 Sobic001G078600 Sobic010G274000--Sobic001G078600 Sobic010G274000--Sobic004G197400 Sobic007G100600 Sobic007G100600 Sobic010G274000--Sobic007G100600 Sobic006G102900 Sobic006G102900 Sobic010G274000--Sobic006G102900 Sobic010G274000--Sobic006G116500 Sobic004G355500--Sobic006G116500 Sobic001G456500 Sobic001G456500 Sobic004G355500--Sobic001G456500 Sobic004G355500--Sobic007G152900 Sobic010G103700 Sobic010G103700 Sobic004G355500--Sobic010G103700 Sobic001G169800 Sobic001G169800 Sobic004G355500--Sobic001G169800 Sobic004G355500--Sobic004G197400 Sobic009G088200 Sobic009G088200 Sobic004G355500--Sobic009G088200 Sobic004G355500--Sobic001G103000 Sobic008G129200 Sobic008G129200 Sobic004G355500--Sobic008G129200 Sobic003G118100 Sobic003G118100 Sobic002G191000--Sobic003G118100 Sobic006G035600 Sobic006G035600 Sobic002G191000--Sobic006G035600 Sobic010G051100 Sobic010G051100 Sobic002G191000--Sobic010G051100 Sobic001G029800 Sobic001G029800 Sobic002G191000--Sobic001G029800 Sobic010G008900 Sobic010G008900 Sobic002G191000--Sobic010G008900 Sobic002G191000--Sobic001G070300 Sobic002G191000--Sobic010G274000 Sobic004G271500 Sobic004G271500 Sobic002G191000--Sobic004G271500 Sobic002G191000--Sobic009G181500 Sobic001G196000 Sobic001G196000 Sobic007G139500--Sobic001G196000 Sobic001G051300 Sobic001G051300 Sobic007G139500--Sobic001G051300 Sobic009G206500 Sobic009G206500 Sobic007G139500--Sobic009G206500 Sobic001G437500 Sobic001G437500 Sobic007G139500--Sobic001G437500 Sobic003G179500 Sobic003G179500 Sobic007G139500--Sobic003G179500 Sobic007G139500--Sobic001G103000 Sobic003G017500 Sobic003G017500 Sobic007G139500--Sobic003G017500 Sobic007G139500--Sobic002G191000 Sobic009G214100 Sobic009G214100 Sobic007G139500--Sobic009G214100 Sobic003G135400--Sobic003G410600 Sobic003G135400--Sobic001G078600 Sobic003G294500 Sobic003G294500 Sobic003G135400--Sobic003G294500 Sobic003G135400--Sobic004G197400 Sobic008G141200 Sobic008G141200 Sobic003G135400--Sobic008G141200 Sobic003G135400--Sobic005G144600 Sobic007G219400 Sobic007G219400 Sobic003G135400--Sobic007G219400 Sobic003G135400--Sobic001G103000 Sobic005G047100 Sobic005G047100 Sobic003G135400--Sobic005G047100 Sobic003G410600--Sobic003G294500 Sobic003G013000 Sobic003G013000 Sobic003G410600--Sobic003G013000 Sobic003G410600--Sobic005G144600 Sobic001G177900 Sobic001G177900 Sobic003G410600--Sobic001G177900 Sobic003G410600--Sobic003G135400 Sobic003G314900 Sobic003G314900 Sobic003G410600--Sobic003G314900 Sobic007G168900 Sobic007G168900 Sobic003G410600--Sobic007G168900 Sobic003G410600--Sobic010G008900 Sobic003G410600--Sobic001G029800 Sobic004G197400--Sobic003G294500 Sobic004G197400--Sobic005G144600 Sobic004G197400--Sobic001G456500 Sobic004G197400--Sobic006G116500 Sobic004G197400--Sobic010G274000 Sobic004G197400--Sobic001G070300 Sobic004G197400--Sobic001G078600 Sobic004G197400--Sobic004G355500 Sobic010G147700 Sobic010G147700 Sobic004G197400--Sobic010G147700 Sobic007G152900--Sobic004G355500 Sobic007G152900--Sobic010G103700 Sobic007G152900--Sobic006G116500 Sobic007G152900--Sobic009G088200 Sobic007G152900--Sobic001G070300 Sobic007G152900--Sobic010G274000 Sobic006G140100 Sobic006G140100 Sobic007G152900--Sobic006G140100 Sobic002G280700 Sobic002G280700 Sobic007G152900--Sobic002G280700 Sobic007G152900--Sobic001G103000 Sobic006G116500--Sobic001G456500 Sobic006G116500--Sobic004G355500 Sobic006G116500--Sobic001G169800 Sobic006G116500--Sobic001G070300 Sobic006G116500--Sobic003G179500 Sobic006G116500--Sobic008G129200 Sobic002G223900 Sobic002G223900 Sobic006G116500--Sobic002G223900 Sobic004G331600 Sobic004G331600 Sobic006G116500--Sobic004G331600 Sobic004G047100 Sobic004G047100 Sobic006G116500--Sobic004G047100
Octagon: transcription factors


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