Gene annotation
Transcriptome id Sobic.001G070300.1
Synonym Sb01g006360
Functional annotation expressed protein
UniProt C5WZ30
Pfam -
Panther DB PTHR33287 PTHR33287:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G12870 : -
RAP-DB (Rice) LOC_Os03g56700.1 : expressed protein
MaizeGDB (Corn) Zm00025a008165 , Zm00025a016665
Brachypodium KQK12912
Barley HORVU5Hr1G100800.1 , HORVU5Hr1G100800.2
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G274000 cyclin, putative, expressed K05868: G2/mitotic-specific cyclin-B1
2 Sobic.007G100600 plastocyanin-like domain containing protein, putative, expressed -
3 Sobic.006G116500 expressed protein -
4 Sobic.002G191000 STE_MEKK_ste11_MAP3K.2 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
5 Sobic.009G181500 Up-reguralion under heat(PubMedID : 24916767)@cyclin, putative, expressed -
6 Sobic.004G197400 expressed protein K00558: DNMT1, DNA (cytosine-5)-methyltransferase 1
7 Sobic.005G144600 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
8 Sobic.001G142000 deoxyuridine 5-triphosphate nucleotidohydrolase, putative, expressed K01520: dut, dUTP pyrophosphatase
9 Sobic.004G047100 EH domain-containing protein 1, putative, expressed K12483: EH domain-containing protein 1
10 Sobic.008G129200 MCM7 - Putative minichromosome maintenance MCM complex subunit 7, expressed K02210: MCM7, DNA replication licensing factor MCM7
11 Sobic.003G179500 expressed protein K06676: BRRN1, BRN1, condensin complex subunit 2
12 Sobic.001G456500 RPA1B - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1
13 Sobic.010G003100 monocopper oxidase, putative, expressed -
14 Sobic.003G294500 dynamin family protein, putative, expressed -
15 Sobic.010G054600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ribonucleoside-diphosphate reductase large subunit, putative, expressed K10807: ribonucleoside-diphosphate reductase subunit M1
16 Sobic.001G078600 CAMK_CAMK_like_Aur_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
17 Sobic.004G331600 MCM5 - Putative minichromosome maintenance MCM complex subunit 5, expressed K02209: MCM5, DNA replication licensing factor MCM5
18 Sobic.010G051100 OsPDIL1-5 protein disulfide isomerase PDIL1-5, expressed K09580: PDIA1, protein disulfide-isomerase A1
19 Sobic.006G035600 Kinesin motor domain domain containing protein, expressed K10400: kinesin family member 15
20 Sobic.004G355500 RPA2A - Putative single-stranded DNA binding complex subunit 2, expressed K10739: RFA2, replication factor A2


Gene co-expression network
sample Sobic001G070300 Sobic001G070300 Sobic010G274000 Sobic010G274000 Sobic001G070300--Sobic010G274000 Sobic007G100600 Sobic007G100600 Sobic001G070300--Sobic007G100600 Sobic006G116500 Sobic006G116500 Sobic001G070300--Sobic006G116500 Sobic002G191000 Sobic002G191000 Sobic001G070300--Sobic002G191000 Sobic009G181500 Sobic009G181500 Sobic001G070300--Sobic009G181500 Sobic004G197400 Sobic004G197400 Sobic001G070300--Sobic004G197400 Sobic005G144600 Sobic005G144600 Sobic001G070300--Sobic005G144600 Sobic001G142000 Sobic001G142000 Sobic001G070300--Sobic001G142000 Sobic004G047100 Sobic004G047100 Sobic001G070300--Sobic004G047100 Sobic010G274000--Sobic001G070300 Sobic010G274000--Sobic009G181500 Sobic010G274000--Sobic005G144600 Sobic010G274000--Sobic002G191000 Sobic001G078600 Sobic001G078600 Sobic010G274000--Sobic001G078600 Sobic010G274000--Sobic004G197400 Sobic010G274000--Sobic007G100600 Sobic006G102900 Sobic006G102900 Sobic010G274000--Sobic006G102900 Sobic010G274000--Sobic006G116500 Sobic007G100600--Sobic001G070300 Sobic004G257600 Sobic004G257600 Sobic007G100600--Sobic004G257600 Sobic003G387700 Sobic003G387700 Sobic007G100600--Sobic003G387700 Sobic003G328500 Sobic003G328500 Sobic007G100600--Sobic003G328500 Sobic007G100600--Sobic001G142000 Sobic010G003100 Sobic010G003100 Sobic007G100600--Sobic010G003100 Sobic006G134200 Sobic006G134200 Sobic007G100600--Sobic006G134200 Sobic002G255500 Sobic002G255500 Sobic007G100600--Sobic002G255500 Sobic007G100600--Sobic010G274000 Sobic001G456500 Sobic001G456500 Sobic006G116500--Sobic001G456500 Sobic004G355500 Sobic004G355500 Sobic006G116500--Sobic004G355500 Sobic001G169800 Sobic001G169800 Sobic006G116500--Sobic001G169800 Sobic006G116500--Sobic001G070300 Sobic003G179500 Sobic003G179500 Sobic006G116500--Sobic003G179500 Sobic008G129200 Sobic008G129200 Sobic006G116500--Sobic008G129200 Sobic002G223900 Sobic002G223900 Sobic006G116500--Sobic002G223900 Sobic004G331600 Sobic004G331600 Sobic006G116500--Sobic004G331600 Sobic006G116500--Sobic004G047100 Sobic003G118100 Sobic003G118100 Sobic002G191000--Sobic003G118100 Sobic006G035600 Sobic006G035600 Sobic002G191000--Sobic006G035600 Sobic010G051100 Sobic010G051100 Sobic002G191000--Sobic010G051100 Sobic001G029800 Sobic001G029800 Sobic002G191000--Sobic001G029800 Sobic010G008900 Sobic010G008900 Sobic002G191000--Sobic010G008900 Sobic002G191000--Sobic001G070300 Sobic002G191000--Sobic010G274000 Sobic004G271500 Sobic004G271500 Sobic002G191000--Sobic004G271500 Sobic002G191000--Sobic009G181500 Sobic002G426800 Sobic002G426800 Sobic009G181500--Sobic002G426800 Sobic009G181500--Sobic004G047100 Sobic009G181500--Sobic010G051100 Sobic009G181500--Sobic006G035600 Sobic009G181500--Sobic005G144600 Sobic009G181500--Sobic010G274000 Sobic009G181500--Sobic006G102900 Sobic009G181500--Sobic001G070300 Sobic003G294500 Sobic003G294500 Sobic009G181500--Sobic003G294500 Sobic004G197400--Sobic003G294500 Sobic004G197400--Sobic005G144600 Sobic004G197400--Sobic001G456500 Sobic004G197400--Sobic006G116500 Sobic004G197400--Sobic010G274000 Sobic004G197400--Sobic001G070300 Sobic004G197400--Sobic001G078600 Sobic004G197400--Sobic004G355500 Sobic010G147700 Sobic010G147700 Sobic004G197400--Sobic010G147700 Sobic007G168900 Sobic007G168900 Sobic005G144600--Sobic007G168900 Sobic010G105400 Sobic010G105400 Sobic005G144600--Sobic010G105400 Sobic005G144600--Sobic003G294500 Sobic005G000500 Sobic005G000500 Sobic005G144600--Sobic005G000500 Sobic003G314900 Sobic003G314900 Sobic005G144600--Sobic003G314900 Sobic001G177900 Sobic001G177900 Sobic005G144600--Sobic001G177900 Sobic005G144600--Sobic004G047100 Sobic004G271300 Sobic004G271300 Sobic005G144600--Sobic004G271300 Sobic005G144600--Sobic003G179500 Sobic001G142000--Sobic001G456500 Sobic010G054600 Sobic010G054600 Sobic001G142000--Sobic010G054600 Sobic001G142000--Sobic004G331600 Sobic003G444300 Sobic003G444300 Sobic001G142000--Sobic003G444300 Sobic001G142000--Sobic008G129200 Sobic001G083300 Sobic001G083300 Sobic001G142000--Sobic001G083300 Sobic001G142000--Sobic006G116500 Sobic001G013400 Sobic001G013400 Sobic001G142000--Sobic001G013400 Sobic004G075900 Sobic004G075900 Sobic001G142000--Sobic004G075900 Sobic004G047100--Sobic010G105400 Sobic004G047100--Sobic005G144600 Sobic004G047100--Sobic009G181500 Sobic002G246900 Sobic002G246900 Sobic004G047100--Sobic002G246900 Sobic004G047100--Sobic002G426800 Sobic004G047100--Sobic003G179500 Sobic001G091500 Sobic001G091500 Sobic004G047100--Sobic001G091500 Sobic004G047100--Sobic006G116500 Sobic004G047100--Sobic003G387700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.