Gene annotation
Transcriptome id Sobic.010G051100.1
Synonym PDI4, ATPDIL1-6, PDIL1-6, ATPDI4, Sb10g004440
Functional annotation OsPDIL1-5 protein disulfide isomerase PDIL1-5, expressed
UniProt C5Z4V3
Pfam PF13848 PF00085
Panther DB PTHR18929 PTHR18929:SF59
NCBI CDD KOG0190; Protein disulfide isomerase (prolyl 4-hydroxylase beta subunit)
KEGG Orthology K09580; PDIA1, protein disulfide-isomerase A1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G16110 : PDI-like 1-6
RAP-DB (Rice) LOC_Os06g06790.1 : OsPDIL1-5 protein disulfide isomerase PDIL1-5, expressed
MaizeGDB (Corn) Zm00025a049922
Brachypodium KQK19474
Barley HORVU7Hr1G026030.4 , HORVU7Hr1G026030.5 , HORVU7Hr1G026030.6 , HORVU7Hr1G026030.7 , HORVU7Hr1G026030.1 , HORVU7Hr1G026030.2 , HORVU7Hr1G026030.3
Wheat TraesCS7D02G121800 , TraesCS7D02G121800 , TraesCS7B02G022800 , TraesCS7A02G123900 , TraesCS7A02G123900
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.010G051100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G181500 Up-reguralion under heat(PubMedID : 24916767)@cyclin, putative, expressed -
2 Sobic.002G191000 STE_MEKK_ste11_MAP3K.2 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
3 Sobic.006G035600 Kinesin motor domain domain containing protein, expressed K10400: kinesin family member 15
4 Sobic.004G053900 expressed protein -
5 Sobic.003G118100 EMB3013, putative, expressed K17545: serine/threonine-protein kinase ULK4
6 Sobic.002G113400 dnaJ domain containing protein, expressed -
7 Sobic.003G179500 expressed protein K06676: BRRN1, BRN1, condensin complex subunit 2
8 Sobic.002G246900 expressed protein -
9 Sobic.010G191000 expressed protein -
10 Sobic.004G047100 EH domain-containing protein 1, putative, expressed K12483: EH domain-containing protein 1
11 Sobic.006G102900 expressed protein -
12 Sobic.002G297500 coiled-coil domain-containing protein 111, putative, expressed -
13 Sobic.001G070300 expressed protein -
14 Sobic.010G105400 chromosome condensation protein like, putative, expressed K06678: YCG1, condensin complex subunit 3
15 Sobic.010G274000 cyclin, putative, expressed K05868: G2/mitotic-specific cyclin-B1
16 Sobic.010G008900 kinesin motor domain containing protein, expressed K11498: centromeric protein E
17 Sobic.005G110535 - K02540: DNA replication licensing factor MCM2
18 Sobic.001G025900 expressed protein -
19 Sobic.001G013400 nuf2 family protein, expressed -
20 Sobic.005G144600 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E


Gene co-expression network
sample Sobic010G051100 Sobic010G051100 Sobic009G181500 Sobic009G181500 Sobic010G051100--Sobic009G181500 Sobic002G191000 Sobic002G191000 Sobic010G051100--Sobic002G191000 Sobic006G035600 Sobic006G035600 Sobic010G051100--Sobic006G035600 Sobic004G053900 Sobic004G053900 Sobic010G051100--Sobic004G053900 Sobic003G118100 Sobic003G118100 Sobic010G051100--Sobic003G118100 Sobic002G113400 Sobic002G113400 Sobic010G051100--Sobic002G113400 Sobic003G179500 Sobic003G179500 Sobic010G051100--Sobic003G179500 Sobic002G246900 Sobic002G246900 Sobic010G051100--Sobic002G246900 Sobic010G191000 Sobic010G191000 Sobic010G051100--Sobic010G191000 Sobic002G426800 Sobic002G426800 Sobic009G181500--Sobic002G426800 Sobic004G047100 Sobic004G047100 Sobic009G181500--Sobic004G047100 Sobic009G181500--Sobic010G051100 Sobic009G181500--Sobic006G035600 Sobic005G144600 Sobic005G144600 Sobic009G181500--Sobic005G144600 Sobic010G274000 Sobic010G274000 Sobic009G181500--Sobic010G274000 Sobic006G102900 Sobic006G102900 Sobic009G181500--Sobic006G102900 Sobic001G070300 Sobic001G070300 Sobic009G181500--Sobic001G070300 Sobic003G294500 Sobic003G294500 Sobic009G181500--Sobic003G294500 Sobic002G191000--Sobic003G118100 Sobic002G191000--Sobic006G035600 Sobic002G191000--Sobic010G051100 Sobic001G029800 Sobic001G029800 Sobic002G191000--Sobic001G029800 Sobic010G008900 Sobic010G008900 Sobic002G191000--Sobic010G008900 Sobic002G191000--Sobic001G070300 Sobic002G191000--Sobic010G274000 Sobic004G271500 Sobic004G271500 Sobic002G191000--Sobic004G271500 Sobic002G191000--Sobic009G181500 Sobic006G035600--Sobic003G118100 Sobic001G131300 Sobic001G131300 Sobic006G035600--Sobic001G131300 Sobic006G035600--Sobic002G191000 Sobic006G035600--Sobic009G181500 Sobic006G035600--Sobic010G008900 Sobic005G000500 Sobic005G000500 Sobic006G035600--Sobic005G000500 Sobic006G035600--Sobic003G294500 Sobic006G035600--Sobic010G051100 Sobic008G148000 Sobic008G148000 Sobic006G035600--Sobic008G148000 Sobic004G053900--Sobic002G113400 Sobic002G297500 Sobic002G297500 Sobic004G053900--Sobic002G297500 Sobic002G290000 Sobic002G290000 Sobic004G053900--Sobic002G290000 Sobic007G125300 Sobic007G125300 Sobic004G053900--Sobic007G125300 Sobic004G053900--Sobic008G148000 Sobic005G110535 Sobic005G110535 Sobic004G053900--Sobic005G110535 Sobic004G053900--Sobic010G051100 Sobic006G179200 Sobic006G179200 Sobic004G053900--Sobic006G179200 Sobic004G328300 Sobic004G328300 Sobic004G053900--Sobic004G328300 Sobic003G118100--Sobic006G035600 Sobic003G118100--Sobic002G191000 Sobic003G118100--Sobic010G008900 Sobic003G118100--Sobic008G148000 Sobic003G118100--Sobic005G000500 Sobic003G118100--Sobic007G125300 Sobic003G118100--Sobic001G131300 Sobic003G118100--Sobic003G294500 Sobic003G118100--Sobic001G029800 Sobic002G113400--Sobic004G053900 Sobic001G025900 Sobic001G025900 Sobic002G113400--Sobic001G025900 Sobic002G113400--Sobic002G297500 Sobic002G113400--Sobic002G290000 Sobic001G013400 Sobic001G013400 Sobic002G113400--Sobic001G013400 Sobic002G113400--Sobic008G148000 Sobic002G113400--Sobic005G110535 Sobic002G113400--Sobic007G125300 Sobic002G113400--Sobic010G051100 Sobic003G183700 Sobic003G183700 Sobic003G179500--Sobic003G183700 Sobic010G103700 Sobic010G103700 Sobic003G179500--Sobic010G103700 Sobic010G105400 Sobic010G105400 Sobic003G179500--Sobic010G105400 Sobic003G179500--Sobic005G144600 Sobic010G147700 Sobic010G147700 Sobic003G179500--Sobic010G147700 Sobic009G087000 Sobic009G087000 Sobic003G179500--Sobic009G087000 Sobic003G179500--Sobic005G110535 Sobic006G116500 Sobic006G116500 Sobic003G179500--Sobic006G116500 Sobic003G179500--Sobic004G047100 Sobic002G246900--Sobic004G047100 Sobic002G246900--Sobic010G105400 Sobic002G246900--Sobic010G191000 Sobic003G107200 Sobic003G107200 Sobic002G246900--Sobic003G107200 Sobic001G238900 Sobic001G238900 Sobic002G246900--Sobic001G238900 Sobic002G246900--Sobic009G181500 Sobic002G236700 Sobic002G236700 Sobic002G246900--Sobic002G236700 Sobic001G169800 Sobic001G169800 Sobic002G246900--Sobic001G169800 Sobic002G230800 Sobic002G230800 Sobic002G246900--Sobic002G230800 Sobic010G191000--Sobic003G179500 Sobic010G191000--Sobic002G246900 Sobic010G191000--Sobic010G105400 Sobic010G191000--Sobic004G047100 Sobic010G191000--Sobic010G051100 Sobic010G191000--Sobic002G230800 Sobic010G191000--Sobic005G144600 Sobic001G255600 Sobic001G255600 Sobic010G191000--Sobic001G255600 Sobic010G191000--Sobic006G102900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.