Gene annotation
Transcriptome id Sobic.004G053900.1
Synonym Sb04g004570
Functional annotation expressed protein
UniProt A0A194YMY7
Pfam -
Panther DB PTHR33318 PTHR33318:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G06660 : -
RAP-DB (Rice) LOC_Os02g07180.1 : expressed protein
MaizeGDB (Corn) Zm00025a034804
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G113400 dnaJ domain containing protein, expressed -
2 Sobic.002G297500 coiled-coil domain-containing protein 111, putative, expressed -
3 Sobic.002G290000 helicase, putative, expressed K15362: BRIP1, BACH1, fanconi anemia group J protein
4 Sobic.007G125300 BRCA1 C Terminus domain containing protein, expressed -
5 Sobic.008G148000 kinesin motor domain containing protein, putative, expressed K10400: kinesin family member 15
6 Sobic.005G110535 - K02540: DNA replication licensing factor MCM2
7 Sobic.010G051100 OsPDIL1-5 protein disulfide isomerase PDIL1-5, expressed K09580: PDIA1, protein disulfide-isomerase A1
8 Sobic.006G179200 cyclin, putative, expressed K05868: G2/mitotic-specific cyclin-B1
9 Sobic.004G328300 expressed protein -
10 Sobic.001G025900 expressed protein -
11 Sobic.001G013400 nuf2 family protein, expressed -
12 Sobic.003G118100 EMB3013, putative, expressed K17545: serine/threonine-protein kinase ULK4
13 Sobic.006G035600 Kinesin motor domain domain containing protein, expressed K10400: kinesin family member 15
14 Sobic.001G082800 ORC5 - Putative origin recognition complex subunit 5, expressed K02607: origin recognition complex subunit 5
15 Sobic.009G181500 Up-reguralion under heat(PubMedID : 24916767)@cyclin, putative, expressed -
16 Sobic.010G008900 kinesin motor domain containing protein, expressed K11498: centromeric protein E
17 Sobic.003G315700 AAA-type ATPase family protein, putative, expressed -
18 Sobic.001G170800 "Transport protein(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659835)@transport protein-related, putative, expressed -
19 Sobic.002G190000 ZOS9-05 - C2H2 zinc finger protein, expressed -
20 Sobic.005G000500 kinesin motor domain containing protein, putative, expressed K10398: KIF11, kinesin family member 11


Gene co-expression network
sample Sobic004G053900 Sobic004G053900 Sobic002G113400 Sobic002G113400 Sobic004G053900--Sobic002G113400 Sobic002G297500 Sobic002G297500 Sobic004G053900--Sobic002G297500 Sobic002G290000 Sobic002G290000 Sobic004G053900--Sobic002G290000 Sobic007G125300 Sobic007G125300 Sobic004G053900--Sobic007G125300 Sobic008G148000 Sobic008G148000 Sobic004G053900--Sobic008G148000 Sobic005G110535 Sobic005G110535 Sobic004G053900--Sobic005G110535 Sobic010G051100 Sobic010G051100 Sobic004G053900--Sobic010G051100 Sobic006G179200 Sobic006G179200 Sobic004G053900--Sobic006G179200 Sobic004G328300 Sobic004G328300 Sobic004G053900--Sobic004G328300 Sobic002G113400--Sobic004G053900 Sobic001G025900 Sobic001G025900 Sobic002G113400--Sobic001G025900 Sobic002G113400--Sobic002G297500 Sobic002G113400--Sobic002G290000 Sobic001G013400 Sobic001G013400 Sobic002G113400--Sobic001G013400 Sobic002G113400--Sobic008G148000 Sobic002G113400--Sobic005G110535 Sobic002G113400--Sobic007G125300 Sobic002G113400--Sobic010G051100 Sobic002G297500--Sobic002G113400 Sobic002G297500--Sobic004G053900 Sobic001G082800 Sobic001G082800 Sobic002G297500--Sobic001G082800 Sobic002G297500--Sobic010G051100 Sobic009G136000 Sobic009G136000 Sobic002G297500--Sobic009G136000 Sobic002G297500--Sobic001G013400 Sobic006G119300 Sobic006G119300 Sobic002G297500--Sobic006G119300 Sobic008G004900 Sobic008G004900 Sobic002G297500--Sobic008G004900 Sobic002G297500--Sobic001G025900 Sobic002G290000--Sobic005G110535 Sobic001G377700 Sobic001G377700 Sobic002G290000--Sobic001G377700 Sobic002G290000--Sobic007G125300 Sobic009G087000 Sobic009G087000 Sobic002G290000--Sobic009G087000 Sobic010G147700 Sobic010G147700 Sobic002G290000--Sobic010G147700 Sobic002G290000--Sobic001G013400 Sobic002G290000--Sobic002G113400 Sobic008G129200 Sobic008G129200 Sobic002G290000--Sobic008G129200 Sobic002G290000--Sobic004G053900 Sobic007G125300--Sobic002G290000 Sobic007G125300--Sobic005G110535 Sobic007G125300--Sobic008G148000 Sobic007G125300--Sobic004G053900 Sobic001G109700 Sobic001G109700 Sobic007G125300--Sobic001G109700 Sobic007G125300--Sobic001G377700 Sobic002G204400 Sobic002G204400 Sobic007G125300--Sobic002G204400 Sobic003G118100 Sobic003G118100 Sobic007G125300--Sobic003G118100 Sobic007G125300--Sobic002G113400 Sobic005G000500 Sobic005G000500 Sobic008G148000--Sobic005G000500 Sobic008G148000--Sobic002G204400 Sobic001G170800 Sobic001G170800 Sobic008G148000--Sobic001G170800 Sobic010G008900 Sobic010G008900 Sobic008G148000--Sobic010G008900 Sobic007G168900 Sobic007G168900 Sobic008G148000--Sobic007G168900 Sobic004G271300 Sobic004G271300 Sobic008G148000--Sobic004G271300 Sobic003G444100 Sobic003G444100 Sobic008G148000--Sobic003G444100 Sobic003G314900 Sobic003G314900 Sobic008G148000--Sobic003G314900 Sobic009G184200 Sobic009G184200 Sobic008G148000--Sobic009G184200 Sobic005G110535--Sobic002G290000 Sobic005G110535--Sobic009G087000 Sobic005G110535--Sobic010G147700 Sobic005G110535--Sobic008G129200 Sobic003G183700 Sobic003G183700 Sobic005G110535--Sobic003G183700 Sobic003G369200 Sobic003G369200 Sobic005G110535--Sobic003G369200 Sobic004G321400 Sobic004G321400 Sobic005G110535--Sobic004G321400 Sobic003G179500 Sobic003G179500 Sobic005G110535--Sobic003G179500 Sobic005G110535--Sobic001G377700 Sobic009G181500 Sobic009G181500 Sobic010G051100--Sobic009G181500 Sobic002G191000 Sobic002G191000 Sobic010G051100--Sobic002G191000 Sobic006G035600 Sobic006G035600 Sobic010G051100--Sobic006G035600 Sobic010G051100--Sobic004G053900 Sobic010G051100--Sobic003G118100 Sobic010G051100--Sobic002G113400 Sobic010G051100--Sobic003G179500 Sobic002G246900 Sobic002G246900 Sobic010G051100--Sobic002G246900 Sobic010G191000 Sobic010G191000 Sobic010G051100--Sobic010G191000 Sobic006G179200--Sobic004G053900 Sobic010G105400 Sobic010G105400 Sobic006G179200--Sobic010G105400 Sobic006G179200--Sobic008G148000 Sobic006G179200--Sobic002G113400 Sobic006G179200--Sobic006G035600 Sobic001G131300 Sobic001G131300 Sobic006G179200--Sobic001G131300 Sobic006G179200--Sobic001G170800 Sobic006G179200--Sobic007G125300 Sobic006G179200--Sobic005G000500 Sobic005G055600 Sobic005G055600 Sobic004G328300--Sobic005G055600 Sobic006G193100 Sobic006G193100 Sobic004G328300--Sobic006G193100 Sobic003G315700 Sobic003G315700 Sobic004G328300--Sobic003G315700 Sobic004G328300--Sobic004G053900 Sobic004G328300--Sobic001G025900 Sobic001G023500 Sobic001G023500 Sobic004G328300--Sobic001G023500 Sobic001G154300 Sobic001G154300 Sobic004G328300--Sobic001G154300 Sobic009G202801 Sobic009G202801 Sobic004G328300--Sobic009G202801 Sobic004G328300--Sobic002G113400
Octagon: transcription factors


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