Gene annotation
Transcriptome id Sobic.002G190000.1,Sobic.002G190000.2
Synonym Sb02g023750
Functional annotation ZOS9-05 - C2H2 zinc finger protein, expressed
UniProt A0A1B6QCB8 , C5XBG7
Pfam PF02892 PF05699 PF14372
Panther DB PTHR23272 PTHR23272:SF38
NCBI CDD KOG1121; Tam3-transposase (Ac family)
KEGG Orthology -
Gene Ontology GO:0003677; DNA binding


Orthologs (automatic annotation)
TAIR AT3G42170 : BED zinc finger ;hAT family dimerisation domain
RAP-DB (Rice) LOC_Os09g21430.1 : ZOS9-05 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G055600 expressed protein -
2 Sobic.001G377700 expressed protein K10895: fanconi anemia group I protein
3 Sobic.001G238900 OsFBX386 - F-box domain containing protein, expressed -
4 Sobic.005G110535 - K02540: DNA replication licensing factor MCM2
5 Sobic.004G053900 expressed protein -
6 Sobic.002G290000 helicase, putative, expressed K15362: BRIP1, BACH1, fanconi anemia group J protein
7 Sobic.001G118800 homologous-pairing protein meu13, putative, expressed K06695: 26S proteasome regulatory subunit, ATPase 3, interacting protein
8 Sobic.002G246900 expressed protein -
9 Sobic.001G013400 nuf2 family protein, expressed -
10 Sobic.004G047100 EH domain-containing protein 1, putative, expressed K12483: EH domain-containing protein 1
11 Sobic.007G007800 DNA repair metallo-beta-lactamase, putative, expressed K15340: DCLRE1A, SNM1A, DNA cross-link repair 1A protein
12 Sobic.002G113400 dnaJ domain containing protein, expressed -
13 Sobic.004G190500 sucrose transporters("PubMedID : 27986867,PubMedID : 23805151")@Sucrose transporter genes(PubMedID : 24456189)@Sugar transporter(PubMedID : 27330561)@sucrose transporter BoSUT1, putative, expressed K15378: solute carrier family 45, member 1/2/4
14 Sobic.003G183700 MCM4 - Putative minichromosome maintenance MCM complex subunit 4, expressed K02212: MCM4, DNA replication licensing factor MCM4
15 Sobic.010G105400 chromosome condensation protein like, putative, expressed K06678: YCG1, condensin complex subunit 3
16 Sobic.004G321400 BRUSHY 1, putative, expressed -
17 Sobic.005G157300 protein binding protein, putative, expressed -
18 Sobic.009G184200 RecF/RecN/SMC N terminal domain containing protein, expressed K06675: structural maintenance of chromosome 4
19 Sobic.010G051100 OsPDIL1-5 protein disulfide isomerase PDIL1-5, expressed K09580: PDIA1, protein disulfide-isomerase A1
20 Sobic.001G295400 protein kinase domain containing protein, expressed K02214: cell division control protein 7


Gene co-expression network
sample Sobic002G190000 Sobic002G190000 Sobic003G055600 Sobic003G055600 Sobic002G190000--Sobic003G055600 Sobic001G377700 Sobic001G377700 Sobic002G190000--Sobic001G377700 Sobic001G238900 Sobic001G238900 Sobic002G190000--Sobic001G238900 Sobic005G110535 Sobic005G110535 Sobic002G190000--Sobic005G110535 Sobic004G053900 Sobic004G053900 Sobic002G190000--Sobic004G053900 Sobic002G290000 Sobic002G290000 Sobic002G190000--Sobic002G290000 Sobic001G118800 Sobic001G118800 Sobic002G190000--Sobic001G118800 Sobic002G246900 Sobic002G246900 Sobic002G190000--Sobic002G246900 Sobic001G013400 Sobic001G013400 Sobic002G190000--Sobic001G013400 Sobic003G055600--Sobic001G377700 Sobic005G157300 Sobic005G157300 Sobic003G055600--Sobic005G157300 Sobic009G143200 Sobic009G143200 Sobic003G055600--Sobic009G143200 Sobic003G183700 Sobic003G183700 Sobic003G055600--Sobic003G183700 Sobic004G321400 Sobic004G321400 Sobic003G055600--Sobic004G321400 Sobic009G172950 Sobic009G172950 Sobic003G055600--Sobic009G172950 Sobic002G021200 Sobic002G021200 Sobic003G055600--Sobic002G021200 Sobic003G055600--Sobic005G110535 Sobic007G007800 Sobic007G007800 Sobic003G055600--Sobic007G007800 Sobic001G377700--Sobic002G290000 Sobic001G377700--Sobic002G021200 Sobic001G377700--Sobic003G183700 Sobic001G377700--Sobic005G110535 Sobic001G377700--Sobic003G055600 Sobic006G195500 Sobic006G195500 Sobic001G377700--Sobic006G195500 Sobic007G187700 Sobic007G187700 Sobic001G377700--Sobic007G187700 Sobic007G125300 Sobic007G125300 Sobic001G377700--Sobic007G125300 Sobic001G377700--Sobic005G157300 Sobic003G244000 Sobic003G244000 Sobic001G238900--Sobic003G244000 Sobic002G230800 Sobic002G230800 Sobic001G238900--Sobic002G230800 Sobic001G105800 Sobic001G105800 Sobic001G238900--Sobic001G105800 Sobic001G238900--Sobic002G246900 Sobic002G223900 Sobic002G223900 Sobic001G238900--Sobic002G223900 Sobic009G109300 Sobic009G109300 Sobic001G238900--Sobic009G109300 Sobic004G317000 Sobic004G317000 Sobic001G238900--Sobic004G317000 Sobic001G238900--Sobic001G118800 Sobic001G169800 Sobic001G169800 Sobic001G238900--Sobic001G169800 Sobic005G110535--Sobic002G290000 Sobic009G087000 Sobic009G087000 Sobic005G110535--Sobic009G087000 Sobic010G147700 Sobic010G147700 Sobic005G110535--Sobic010G147700 Sobic008G129200 Sobic008G129200 Sobic005G110535--Sobic008G129200 Sobic005G110535--Sobic003G183700 Sobic003G369200 Sobic003G369200 Sobic005G110535--Sobic003G369200 Sobic005G110535--Sobic004G321400 Sobic003G179500 Sobic003G179500 Sobic005G110535--Sobic003G179500 Sobic005G110535--Sobic001G377700 Sobic002G113400 Sobic002G113400 Sobic004G053900--Sobic002G113400 Sobic002G297500 Sobic002G297500 Sobic004G053900--Sobic002G297500 Sobic004G053900--Sobic002G290000 Sobic004G053900--Sobic007G125300 Sobic008G148000 Sobic008G148000 Sobic004G053900--Sobic008G148000 Sobic004G053900--Sobic005G110535 Sobic010G051100 Sobic010G051100 Sobic004G053900--Sobic010G051100 Sobic006G179200 Sobic006G179200 Sobic004G053900--Sobic006G179200 Sobic004G328300 Sobic004G328300 Sobic004G053900--Sobic004G328300 Sobic002G290000--Sobic005G110535 Sobic002G290000--Sobic001G377700 Sobic002G290000--Sobic007G125300 Sobic002G290000--Sobic009G087000 Sobic002G290000--Sobic010G147700 Sobic002G290000--Sobic001G013400 Sobic002G290000--Sobic002G113400 Sobic002G290000--Sobic008G129200 Sobic002G290000--Sobic004G053900 Sobic007G121650 Sobic007G121650 Sobic001G118800--Sobic007G121650 Sobic001G118800--Sobic001G238900 Sobic001G118800--Sobic003G055600 Sobic001G118800--Sobic003G244000 Sobic001G118800--Sobic002G190000 Sobic004G190500 Sobic004G190500 Sobic001G118800--Sobic004G190500 Sobic003G204200 Sobic003G204200 Sobic001G118800--Sobic003G204200 Sobic001G118800--Sobic004G317000 Sobic007G121600 Sobic007G121600 Sobic001G118800--Sobic007G121600 Sobic004G047100 Sobic004G047100 Sobic002G246900--Sobic004G047100 Sobic010G105400 Sobic010G105400 Sobic002G246900--Sobic010G105400 Sobic010G191000 Sobic010G191000 Sobic002G246900--Sobic010G191000 Sobic003G107200 Sobic003G107200 Sobic002G246900--Sobic003G107200 Sobic002G246900--Sobic001G238900 Sobic009G181500 Sobic009G181500 Sobic002G246900--Sobic009G181500 Sobic002G236700 Sobic002G236700 Sobic002G246900--Sobic002G236700 Sobic002G246900--Sobic001G169800 Sobic002G246900--Sobic002G230800 Sobic001G025900 Sobic001G025900 Sobic001G013400--Sobic001G025900 Sobic001G013400--Sobic007G007800 Sobic001G013400--Sobic002G290000 Sobic001G013400--Sobic002G113400 Sobic001G013400--Sobic008G129200 Sobic001G142000 Sobic001G142000 Sobic001G013400--Sobic001G142000 Sobic001G013400--Sobic005G110535 Sobic001G083300 Sobic001G083300 Sobic001G013400--Sobic001G083300 Sobic004G331600 Sobic004G331600 Sobic001G013400--Sobic004G331600
Octagon: transcription factors


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