Gene annotation
Transcriptome id Sobic.004G321400.1
Synonym TSK, BRU1, MGO3, Sb04g035180
Functional annotation BRUSHY 1, putative, expressed
UniProt C5XTP6
Pfam PF13181 PF00515 PF13424
Panther DB PTHR10098 PTHR10098:SF111
NCBI CDD KOG4308; LRR-containing protein
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G18730 : tetratricopeptide repeat (TPR)-containing protein
RAP-DB (Rice) LOC_Os02g54290.1 : BRUSHY 1, putative, expressed
MaizeGDB (Corn) Zm00025a033006
Brachypodium KQK02063 , KQK02062
Barley HORVU6Hr1G082900.16 , HORVU6Hr1G082900.9 , HORVU6Hr1G082900.8 , HORVU6Hr1G082900.7 , HORVU6Hr1G082900.6 , HORVU6Hr1G082900.5 , HORVU6Hr1G082900.4 , HORVU6Hr1G082900.3 , HORVU6Hr1G082900.2 , HORVU6Hr1G082900.1 , HORVU6Hr1G082900.17 , HORVU6Hr1G082900.15 , HORVU6Hr1G082900.14 , HORVU6Hr1G082900.13 , HORVU6Hr1G082900.12 , HORVU6Hr1G082900.11 , HORVU6Hr1G082900.10 , HORVU6Hr1G082900.19 , HORVU6Hr1G082900.18 , HORVU6Hr1G082900.31 , HORVU6Hr1G082900.30 , HORVU6Hr1G082900.32 , HORVU6Hr1G082900.28 , HORVU6Hr1G082900.29 , HORVU6Hr1G082900.27 , HORVU6Hr1G082900.24 , HORVU6Hr1G082900.25 , HORVU6Hr1G082900.22 , HORVU6Hr1G082900.23 , HORVU6Hr1G082900.20 , HORVU6Hr1G082900.21
Wheat TraesCS6A02G343500 , TraesCS6B02G375500 , TraesCS6D02G324300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G183700 MCM4 - Putative minichromosome maintenance MCM complex subunit 4, expressed K02212: MCM4, DNA replication licensing factor MCM4
2 Sobic.009G087000 MCM6 - Putative minichromosome maintenance MCM complex subunit 6, expressed K02542: DNA replication licensing factor MCM6
3 Sobic.005G110535 - K02540: DNA replication licensing factor MCM2
4 Sobic.002G290000 helicase, putative, expressed K15362: BRIP1, BACH1, fanconi anemia group J protein
5 Sobic.003G369200 POLA1 - Putative DNA polymerase alpha catalytic subunit, expressed K02320: DNA polymerase alpha subunit A
6 Sobic.008G129200 MCM7 - Putative minichromosome maintenance MCM complex subunit 7, expressed K02210: MCM7, DNA replication licensing factor MCM7
7 Sobic.004G095200 Peptidase family C50, putative, expressed K02365: separase
8 Sobic.009G172950 - K02541: DNA replication licensing factor MCM3
9 Sobic.004G331600 MCM5 - Putative minichromosome maintenance MCM complex subunit 5, expressed K02209: MCM5, DNA replication licensing factor MCM5
10 Sobic.003G055600 expressed protein -
11 Sobic.001G013400 nuf2 family protein, expressed -
12 Sobic.010G147700 WD domain, G-beta repeat domain containing protein, expressed K11274: WDHD1, chromosome transmission fidelity protein 4
13 Sobic.001G025900 expressed protein -
14 Sobic.001G377700 expressed protein K10895: fanconi anemia group I protein
15 Sobic.001G083300 transducin family protein, putative, expressed K02180: cell cycle arrest protein BUB3
16 Sobic.003G393100 chromosome segregation protein, putative, expressed K06674: structural maintenance of chromosome 2
17 Sobic.006G195500 DNA-binding protein, putative, expressed K10742: DNA replication ATP-dependent helicase Dna2
18 Sobic.003G289800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
19 Sobic.003G179500 expressed protein K06676: BRRN1, BRN1, condensin complex subunit 2
20 Sobic.001G507000 expressed protein -


Gene co-expression network
sample Sobic004G321400 Sobic004G321400 Sobic003G183700 Sobic003G183700 Sobic004G321400--Sobic003G183700 Sobic009G087000 Sobic009G087000 Sobic004G321400--Sobic009G087000 Sobic005G110535 Sobic005G110535 Sobic004G321400--Sobic005G110535 Sobic002G290000 Sobic002G290000 Sobic004G321400--Sobic002G290000 Sobic003G369200 Sobic003G369200 Sobic004G321400--Sobic003G369200 Sobic008G129200 Sobic008G129200 Sobic004G321400--Sobic008G129200 Sobic004G095200 Sobic004G095200 Sobic004G321400--Sobic004G095200 Sobic009G172950 Sobic009G172950 Sobic004G321400--Sobic009G172950 Sobic004G331600 Sobic004G331600 Sobic004G321400--Sobic004G331600 Sobic006G051000 Sobic006G051000 Sobic003G183700--Sobic006G051000 Sobic003G183700--Sobic009G087000 Sobic006G195500 Sobic006G195500 Sobic003G183700--Sobic006G195500 Sobic010G103700 Sobic010G103700 Sobic003G183700--Sobic010G103700 Sobic003G179500 Sobic003G179500 Sobic003G183700--Sobic003G179500 Sobic003G183700--Sobic005G110535 Sobic003G183700--Sobic008G129200 Sobic003G183700--Sobic004G321400 Sobic010G147700 Sobic010G147700 Sobic003G183700--Sobic010G147700 Sobic009G087000--Sobic010G147700 Sobic009G087000--Sobic003G183700 Sobic009G087000--Sobic005G110535 Sobic009G087000--Sobic008G129200 Sobic006G029300 Sobic006G029300 Sobic009G087000--Sobic006G029300 Sobic009G087000--Sobic003G369200 Sobic009G087000--Sobic004G321400 Sobic009G087000--Sobic004G331600 Sobic009G087000--Sobic003G179500 Sobic005G110535--Sobic002G290000 Sobic005G110535--Sobic009G087000 Sobic005G110535--Sobic010G147700 Sobic005G110535--Sobic008G129200 Sobic005G110535--Sobic003G183700 Sobic005G110535--Sobic003G369200 Sobic005G110535--Sobic004G321400 Sobic005G110535--Sobic003G179500 Sobic001G377700 Sobic001G377700 Sobic005G110535--Sobic001G377700 Sobic002G290000--Sobic005G110535 Sobic002G290000--Sobic001G377700 Sobic007G125300 Sobic007G125300 Sobic002G290000--Sobic007G125300 Sobic002G290000--Sobic009G087000 Sobic002G290000--Sobic010G147700 Sobic001G013400 Sobic001G013400 Sobic002G290000--Sobic001G013400 Sobic002G113400 Sobic002G113400 Sobic002G290000--Sobic002G113400 Sobic002G290000--Sobic008G129200 Sobic004G053900 Sobic004G053900 Sobic002G290000--Sobic004G053900 Sobic003G369200--Sobic010G147700 Sobic003G369200--Sobic005G110535 Sobic003G369200--Sobic009G087000 Sobic003G201000 Sobic003G201000 Sobic003G369200--Sobic003G201000 Sobic003G393100 Sobic003G393100 Sobic003G369200--Sobic003G393100 Sobic009G184200 Sobic009G184200 Sobic003G369200--Sobic009G184200 Sobic003G369200--Sobic003G183700 Sobic003G369200--Sobic006G029300 Sobic007G168900 Sobic007G168900 Sobic003G369200--Sobic007G168900 Sobic008G129200--Sobic004G331600 Sobic008G129200--Sobic009G087000 Sobic008G129200--Sobic005G110535 Sobic001G456500 Sobic001G456500 Sobic008G129200--Sobic001G456500 Sobic008G129200--Sobic010G147700 Sobic008G129200--Sobic003G183700 Sobic001G083300 Sobic001G083300 Sobic008G129200--Sobic001G083300 Sobic010G054600 Sobic010G054600 Sobic008G129200--Sobic010G054600 Sobic006G116500 Sobic006G116500 Sobic008G129200--Sobic006G116500 Sobic004G095200--Sobic004G321400 Sobic004G095200--Sobic005G110535 Sobic004G156200 Sobic004G156200 Sobic004G095200--Sobic004G156200 Sobic004G095200--Sobic002G290000 Sobic005G068800 Sobic005G068800 Sobic004G095200--Sobic005G068800 Sobic004G095200--Sobic002G113400 Sobic003G118100 Sobic003G118100 Sobic004G095200--Sobic003G118100 Sobic004G095200--Sobic009G087000 Sobic003G315700 Sobic003G315700 Sobic004G095200--Sobic003G315700 Sobic009G172950--Sobic003G183700 Sobic009G172950--Sobic009G087000 Sobic003G032200 Sobic003G032200 Sobic009G172950--Sobic003G032200 Sobic003G444300 Sobic003G444300 Sobic009G172950--Sobic003G444300 Sobic009G172950--Sobic001G083300 Sobic009G172950--Sobic009G184200 Sobic009G172950--Sobic004G321400 Sobic001G105800 Sobic001G105800 Sobic009G172950--Sobic001G105800 Sobic001G146900 Sobic001G146900 Sobic009G172950--Sobic001G146900 Sobic004G331600--Sobic001G456500 Sobic004G331600--Sobic008G129200 Sobic004G331600--Sobic010G054600 Sobic004G331600--Sobic009G087000 Sobic001G142000 Sobic001G142000 Sobic004G331600--Sobic001G142000 Sobic002G223900 Sobic002G223900 Sobic004G331600--Sobic002G223900 Sobic004G331600--Sobic003G183700 Sobic004G331600--Sobic010G147700 Sobic007G007800 Sobic007G007800 Sobic004G331600--Sobic007G007800
Octagon: transcription factors


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