Gene annotation
Transcriptome id Sobic.001G507000.1
Synonym Sb01g047320
Functional annotation expressed protein
UniProt A0A1B6QQK1
Pfam PF14868
Panther DB PTHR36702 PTHR36702:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G04650 : -
RAP-DB (Rice) LOC_Os03g05040.1 : expressed protein
MaizeGDB (Corn) Zm00025a000599
Brachypodium KQK23695 , PNT78221 , PNT78220
Barley HORVU4Hr1G078920.10 , HORVU4Hr1G078920.11 , HORVU4Hr1G078920.12 , HORVU4Hr1G078920.13 , HORVU4Hr1G078920.14 , HORVU4Hr1G078920.15 , HORVU4Hr1G078920.16 , HORVU4Hr1G078920.17 , HORVU4Hr1G078920.18 , HORVU4Hr1G078920.19 , HORVU4Hr1G078920.25 , HORVU4Hr1G078920.24 , HORVU4Hr1G078920.27 , HORVU4Hr1G078920.26 , HORVU4Hr1G078920.21 , HORVU4Hr1G078920.20 , HORVU4Hr1G078920.23 , HORVU4Hr1G078920.22 , HORVU4Hr1G078920.29 , HORVU4Hr1G078920.28 , HORVU4Hr1G078920.30 , HORVU4Hr1G078920.31 , HORVU4Hr1G078920.2 , HORVU4Hr1G078920.3 , HORVU4Hr1G078920.1 , HORVU4Hr1G078920.6 , HORVU4Hr1G078920.7 , HORVU4Hr1G078920.4 , HORVU4Hr1G078920.5 , HORVU4Hr1G078920.8 , HORVU4Hr1G078920.9
Wheat TraesCS4A02G408600 , TraesCS4D02G306500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G068800 TOPBP1A - Similar to DNA replication protein TOPBP1 from, expressed K10728: topoisomerase (DNA) II binding protein 1
2 Sobic.004G321400 BRUSHY 1, putative, expressed -
3 Sobic.003G183700 MCM4 - Putative minichromosome maintenance MCM complex subunit 4, expressed K02212: MCM4, DNA replication licensing factor MCM4
4 Sobic.001G146900 expressed protein -
5 Sobic.006G120600 AAA-type ATPase family protein, putative, expressed -
6 Sobic.004G156200 POLE1 - Putative DNA polymerase epsilon catalytic subunit, expressed K02324: DNA polymerase epsilon subunit 1
7 Sobic.006G195500 DNA-binding protein, putative, expressed K10742: DNA replication ATP-dependent helicase Dna2
8 Sobic.004G095200 Peptidase family C50, putative, expressed K02365: separase
9 Sobic.009G087000 MCM6 - Putative minichromosome maintenance MCM complex subunit 6, expressed K02542: DNA replication licensing factor MCM6
10 Sobic.002G253900 growth regulator related protein, putative, expressed -
11 Sobic.006G051000 POLA3 - Putative DNA polymerase alpha complex subunit, expressed K02685: DNA primase large subunit
12 Sobic.009G146250 - -
13 Sobic.005G157300 protein binding protein, putative, expressed -
14 Sobic.009G172950 - K02541: DNA replication licensing factor MCM3
15 Sobic.002G351700 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
16 Sobic.010G103700 POLA2 - Putative DNA polymerase alpha complex subunit, expressed K02321: DNA polymerase alpha subunit B
17 Sobic.009G113900 expressed protein -
18 Sobic.005G110535 - K02540: DNA replication licensing factor MCM2
19 Sobic.002G095300 deoxynucleoside kinase family, putative, expressed K00893: deoxycitidine kinase
20 Sobic.003G179500 expressed protein K06676: BRRN1, BRN1, condensin complex subunit 2


Gene co-expression network
sample Sobic001G507000 Sobic001G507000 Sobic005G068800 Sobic005G068800 Sobic001G507000--Sobic005G068800 Sobic004G321400 Sobic004G321400 Sobic001G507000--Sobic004G321400 Sobic003G183700 Sobic003G183700 Sobic001G507000--Sobic003G183700 Sobic001G146900 Sobic001G146900 Sobic001G507000--Sobic001G146900 Sobic006G120600 Sobic006G120600 Sobic001G507000--Sobic006G120600 Sobic004G156200 Sobic004G156200 Sobic001G507000--Sobic004G156200 Sobic006G195500 Sobic006G195500 Sobic001G507000--Sobic006G195500 Sobic004G095200 Sobic004G095200 Sobic001G507000--Sobic004G095200 Sobic009G087000 Sobic009G087000 Sobic001G507000--Sobic009G087000 Sobic005G068800--Sobic001G507000 Sobic005G068800--Sobic004G156200 Sobic005G068800--Sobic004G095200 Sobic005G068800--Sobic006G120600 Sobic009G146250 Sobic009G146250 Sobic005G068800--Sobic009G146250 Sobic005G068800--Sobic006G195500 Sobic005G068800--Sobic003G183700 Sobic002G021200 Sobic002G021200 Sobic005G068800--Sobic002G021200 Sobic009G052100 Sobic009G052100 Sobic005G068800--Sobic009G052100 Sobic004G321400--Sobic003G183700 Sobic004G321400--Sobic009G087000 Sobic005G110535 Sobic005G110535 Sobic004G321400--Sobic005G110535 Sobic002G290000 Sobic002G290000 Sobic004G321400--Sobic002G290000 Sobic003G369200 Sobic003G369200 Sobic004G321400--Sobic003G369200 Sobic008G129200 Sobic008G129200 Sobic004G321400--Sobic008G129200 Sobic004G321400--Sobic004G095200 Sobic009G172950 Sobic009G172950 Sobic004G321400--Sobic009G172950 Sobic004G331600 Sobic004G331600 Sobic004G321400--Sobic004G331600 Sobic006G051000 Sobic006G051000 Sobic003G183700--Sobic006G051000 Sobic003G183700--Sobic009G087000 Sobic003G183700--Sobic006G195500 Sobic010G103700 Sobic010G103700 Sobic003G183700--Sobic010G103700 Sobic003G179500 Sobic003G179500 Sobic003G183700--Sobic003G179500 Sobic003G183700--Sobic005G110535 Sobic003G183700--Sobic008G129200 Sobic003G183700--Sobic004G321400 Sobic010G147700 Sobic010G147700 Sobic003G183700--Sobic010G147700 Sobic001G146900--Sobic009G172950 Sobic001G146900--Sobic009G087000 Sobic001G146900--Sobic003G183700 Sobic001G456500 Sobic001G456500 Sobic001G146900--Sobic001G456500 Sobic001G083300 Sobic001G083300 Sobic001G146900--Sobic001G083300 Sobic002G303800 Sobic002G303800 Sobic001G146900--Sobic002G303800 Sobic003G444300 Sobic003G444300 Sobic001G146900--Sobic003G444300 Sobic001G146900--Sobic004G321400 Sobic001G169800 Sobic001G169800 Sobic001G146900--Sobic001G169800 Sobic006G120600--Sobic010G103700 Sobic006G120600--Sobic003G183700 Sobic006G120600--Sobic006G195500 Sobic006G120600--Sobic002G290000 Sobic006G120600--Sobic002G303800 Sobic006G120600--Sobic003G179500 Sobic007G125300 Sobic007G125300 Sobic006G120600--Sobic007G125300 Sobic006G120600--Sobic009G087000 Sobic006G120600--Sobic006G051000 Sobic004G156200--Sobic005G110535 Sobic004G156200--Sobic005G068800 Sobic003G423600 Sobic003G423600 Sobic004G156200--Sobic003G423600 Sobic004G156200--Sobic002G290000 Sobic004G156200--Sobic009G087000 Sobic006G281400 Sobic006G281400 Sobic004G156200--Sobic006G281400 Sobic004G156200--Sobic003G369200 Sobic004G156200--Sobic009G146250 Sobic004G156200--Sobic009G052100 Sobic006G195500--Sobic006G051000 Sobic006G195500--Sobic003G183700 Sobic006G195500--Sobic010G103700 Sobic001G377700 Sobic001G377700 Sobic006G195500--Sobic001G377700 Sobic006G195500--Sobic009G087000 Sobic006G195500--Sobic006G120600 Sobic006G196600 Sobic006G196600 Sobic006G195500--Sobic006G196600 Sobic006G195500--Sobic005G110535 Sobic006G195500--Sobic003G179500 Sobic004G095200--Sobic004G321400 Sobic004G095200--Sobic005G110535 Sobic004G095200--Sobic004G156200 Sobic004G095200--Sobic002G290000 Sobic004G095200--Sobic005G068800 Sobic002G113400 Sobic002G113400 Sobic004G095200--Sobic002G113400 Sobic003G118100 Sobic003G118100 Sobic004G095200--Sobic003G118100 Sobic004G095200--Sobic009G087000 Sobic003G315700 Sobic003G315700 Sobic004G095200--Sobic003G315700 Sobic009G087000--Sobic010G147700 Sobic009G087000--Sobic003G183700 Sobic009G087000--Sobic005G110535 Sobic009G087000--Sobic008G129200 Sobic006G029300 Sobic006G029300 Sobic009G087000--Sobic006G029300 Sobic009G087000--Sobic003G369200 Sobic009G087000--Sobic004G321400 Sobic009G087000--Sobic004G331600 Sobic009G087000--Sobic003G179500
Octagon: transcription factors


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