Gene annotation
Transcriptome id Sobic.002G351700.2,Sobic.002G351700.4,Sobic.002G351700.3
Synonym Sb02g037380
Functional annotation glucan endo-1,3-beta-glucosidase precursor, putative, expressed
UniProt C5XCE5
Pfam PF07983 PF00332
Panther DB PTHR32227 PTHR32227:SF48
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT3G13560 : O-Glycosyl hydrolases family 17 protein
RAP-DB (Rice) LOC_Os07g38930.2,LOC_Os07g38930.4 : glucan endo-1,3-beta-glucosidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a014980 , Zm00025a048494
Brachypodium PNT74879 , KQK15551 , KQK15552
Barley HORVU2Hr1G036980.17 , HORVU2Hr1G036980.14 , HORVU2Hr1G036980.15 , HORVU2Hr1G036980.12 , HORVU2Hr1G036980.13 , HORVU2Hr1G036980.16 , HORVU5Hr1G048630.4 , HORVU5Hr1G048630.6 , HORVU5Hr1G048630.7 , HORVU5Hr1G048630.1 , HORVU5Hr1G048630.2 , HORVU5Hr1G048630.3 , HORVU5Hr1G048630.8 , HORVU5Hr1G048630.9 , HORVU2Hr1G036980.10 , HORVU2Hr1G036980.11 , HORVU5Hr1G048630.16 , HORVU5Hr1G048630.17 , HORVU5Hr1G048630.14 , HORVU5Hr1G048630.15 , HORVU5Hr1G048630.12 , HORVU5Hr1G048630.13 , HORVU5Hr1G048630.10 , HORVU5Hr1G048630.11 , HORVU5Hr1G048630.18 , HORVU5Hr1G048630.19 , HORVU2Hr1G036980.4 , HORVU2Hr1G036980.5 , HORVU2Hr1G036980.6 , HORVU2Hr1G036980.7 , HORVU2Hr1G036980.1 , HORVU2Hr1G036980.2 , HORVU2Hr1G036980.3 , HORVU2Hr1G036980.8 , HORVU2Hr1G036980.9
Wheat TraesCS2D02G201000 , TraesCS5B02G153900 , TraesCS5B02G153900 , TraesCS5B02G153900 , TraesCS5A02G155600 , TraesCS5D02G160700 , TraesCS2B02G220300
Populus -


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cDNA sequences
Sobic.002G351700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G226700 kinesin motor domain containing protein, putative, expressed K10393: KIF2_24, kinesin family member 2/24
2 Sobic.004G321400 BRUSHY 1, putative, expressed -
3 Sobic.003G289800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
4 Sobic.001G051300 BEE 1, putative, expressed -
5 Sobic.001G123100 Os3bglu8 - beta-glucosidase, exo-beta-glucansase, high similarity to Os3bglu7, expressed K05350: beta-glucosidase
6 Sobic.003G412800 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein -
7 Sobic.003G292700 kinesin motor protein-related, putative, expressed K10406: kinesin family member C2/C3
8 Sobic.003G420300 zinc finger protein, putative, expressed -
9 Sobic.002G383100 expressed protein -
10 Sobic.001G369800 monocopper oxidase, putative, expressed -
11 Sobic.010G067600 expressed protein K16586: HAUS augmin-like complex subunit 3
12 Sobic.002G253900 growth regulator related protein, putative, expressed -
13 Sobic.010G079100 lysM domain-containing GPI-anchored protein 1 precursor, putative, expressed -
14 Sobic.001G507000 expressed protein -
15 Sobic.005G068800 TOPBP1A - Similar to DNA replication protein TOPBP1 from, expressed K10728: topoisomerase (DNA) II binding protein 1
16 Sobic.008G127550 - -
17 Sobic.004G095200 Peptidase family C50, putative, expressed K02365: separase
18 Sobic.009G087000 MCM6 - Putative minichromosome maintenance MCM complex subunit 6, expressed K02542: DNA replication licensing factor MCM6
19 Sobic.007G084200 expressed protein -
20 Sobic.006G071628 - -


Gene co-expression network
sample Sobic002G351700 Sobic002G351700 Sobic003G226700 Sobic003G226700 Sobic002G351700--Sobic003G226700 Sobic004G321400 Sobic004G321400 Sobic002G351700--Sobic004G321400 Sobic003G289800 Sobic003G289800 Sobic002G351700--Sobic003G289800 Sobic001G051300 Sobic001G051300 Sobic002G351700--Sobic001G051300 Sobic001G123100 Sobic001G123100 Sobic002G351700--Sobic001G123100 Sobic003G412800 Sobic003G412800 Sobic002G351700--Sobic003G412800 Sobic003G292700 Sobic003G292700 Sobic002G351700--Sobic003G292700 Sobic003G420300 Sobic003G420300 Sobic002G351700--Sobic003G420300 Sobic002G383100 Sobic002G383100 Sobic002G351700--Sobic002G383100 Sobic007G084200 Sobic007G084200 Sobic003G226700--Sobic007G084200 Sobic003G226700--Sobic003G420300 Sobic003G226700--Sobic003G292700 Sobic001G425700 Sobic001G425700 Sobic003G226700--Sobic001G425700 Sobic003G226700--Sobic003G289800 Sobic009G212100 Sobic009G212100 Sobic003G226700--Sobic009G212100 Sobic001G487200 Sobic001G487200 Sobic003G226700--Sobic001G487200 Sobic004G315700 Sobic004G315700 Sobic003G226700--Sobic004G315700 Sobic003G024000 Sobic003G024000 Sobic003G226700--Sobic003G024000 Sobic003G183700 Sobic003G183700 Sobic004G321400--Sobic003G183700 Sobic009G087000 Sobic009G087000 Sobic004G321400--Sobic009G087000 Sobic005G110535 Sobic005G110535 Sobic004G321400--Sobic005G110535 Sobic002G290000 Sobic002G290000 Sobic004G321400--Sobic002G290000 Sobic003G369200 Sobic003G369200 Sobic004G321400--Sobic003G369200 Sobic008G129200 Sobic008G129200 Sobic004G321400--Sobic008G129200 Sobic004G095200 Sobic004G095200 Sobic004G321400--Sobic004G095200 Sobic009G172950 Sobic009G172950 Sobic004G321400--Sobic009G172950 Sobic004G331600 Sobic004G331600 Sobic004G321400--Sobic004G331600 Sobic003G289800--Sobic002G383100 Sobic003G289800--Sobic009G087000 Sobic003G289800--Sobic001G051300 Sobic003G289800--Sobic003G183700 Sobic003G289800--Sobic003G420300 Sobic003G179500 Sobic003G179500 Sobic003G289800--Sobic003G179500 Sobic003G289800--Sobic005G110535 Sobic003G389100 Sobic003G389100 Sobic003G289800--Sobic003G389100 Sobic010G147700 Sobic010G147700 Sobic003G289800--Sobic010G147700 Sobic001G051300--Sobic003G289800 Sobic001G051300--Sobic002G383100 Sobic007G139500 Sobic007G139500 Sobic001G051300--Sobic007G139500 Sobic001G051300--Sobic009G087000 Sobic006G071628 Sobic006G071628 Sobic001G051300--Sobic006G071628 Sobic001G051300--Sobic003G179500 Sobic001G051300--Sobic010G147700 Sobic003G017500 Sobic003G017500 Sobic001G051300--Sobic003G017500 Sobic003G201000 Sobic003G201000 Sobic001G051300--Sobic003G201000 Sobic002G284100 Sobic002G284100 Sobic001G123100--Sobic002G284100 Sobic002G253900 Sobic002G253900 Sobic001G123100--Sobic002G253900 Sobic001G369800 Sobic001G369800 Sobic001G123100--Sobic001G369800 Sobic005G143100 Sobic005G143100 Sobic001G123100--Sobic005G143100 Sobic004G145300 Sobic004G145300 Sobic001G123100--Sobic004G145300 Sobic001G123300 Sobic001G123300 Sobic001G123100--Sobic001G123300 Sobic001G540700 Sobic001G540700 Sobic001G123100--Sobic001G540700 Sobic002G006100 Sobic002G006100 Sobic001G123100--Sobic002G006100 Sobic003G224700 Sobic003G224700 Sobic001G123100--Sobic003G224700 Sobic003G412800--Sobic003G179500 Sobic010G079100 Sobic010G079100 Sobic003G412800--Sobic010G079100 Sobic003G412800--Sobic003G289800 Sobic010G103700 Sobic010G103700 Sobic003G412800--Sobic010G103700 Sobic003G412800--Sobic001G051300 Sobic009G119700 Sobic009G119700 Sobic003G412800--Sobic009G119700 Sobic010G151700 Sobic010G151700 Sobic003G412800--Sobic010G151700 Sobic003G412800--Sobic002G351700 Sobic009G189200 Sobic009G189200 Sobic003G412800--Sobic009G189200 Sobic003G292700--Sobic003G420300 Sobic003G292700--Sobic003G226700 Sobic009G202801 Sobic009G202801 Sobic003G292700--Sobic009G202801 Sobic001G054700 Sobic001G054700 Sobic003G292700--Sobic001G054700 Sobic006G142500 Sobic006G142500 Sobic003G292700--Sobic006G142500 Sobic003G032200 Sobic003G032200 Sobic003G292700--Sobic003G032200 Sobic001G377700 Sobic001G377700 Sobic003G292700--Sobic001G377700 Sobic002G021200 Sobic002G021200 Sobic003G292700--Sobic002G021200 Sobic008G083500 Sobic008G083500 Sobic003G292700--Sobic008G083500 Sobic003G420300--Sobic003G292700 Sobic003G420300--Sobic003G226700 Sobic003G420300--Sobic008G083500 Sobic010G067600 Sobic010G067600 Sobic003G420300--Sobic010G067600 Sobic003G420300--Sobic003G289800 Sobic003G420300--Sobic004G315700 Sobic002G320600 Sobic002G320600 Sobic003G420300--Sobic002G320600 Sobic003G420300--Sobic007G084200 Sobic009G052100 Sobic009G052100 Sobic003G420300--Sobic009G052100 Sobic002G383100--Sobic003G289800 Sobic002G383100--Sobic009G087000 Sobic002G383100--Sobic001G051300 Sobic002G383100--Sobic010G147700 Sobic002G383100--Sobic003G017500 Sobic002G383100--Sobic003G179500 Sobic002G383100--Sobic003G032200 Sobic002G383100--Sobic003G183700 Sobic002G383100--Sobic004G315700
Octagon: transcription factors


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