Gene annotation
Transcriptome id Sobic.010G067600.1
Synonym Sb10g005880
Functional annotation expressed protein
UniProt A0A194YHP8
Pfam PF14932
Panther DB PTHR19378 PTHR19378:SF0
NCBI CDD -
KEGG Orthology K16586; HAUS augmin-like complex subunit 3
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G48520 : -
RAP-DB (Rice) LOC_Os06g08730.1 : expressed protein
MaizeGDB (Corn) Zm00025a042414
Brachypodium PNT76328 , PNT76329 , PNT76326 , PNT76327 , PNT76324 , PNT76325 , PNT76323 , PNT76331 , PNT76330 , PNT76333 , PNT76332 , PNT76334 , KQK19232 , KQK19233 , KQK19234 , KQK19235 , KQK19236 , KQK19237 , KQK19238 , KQK19239
Barley HORVU7Hr1G030930.21 , HORVU7Hr1G030930.20 , HORVU7Hr1G030930.23 , HORVU7Hr1G030930.22 , HORVU7Hr1G030930.25 , HORVU7Hr1G030930.24 , HORVU7Hr1G030930.27 , HORVU7Hr1G030930.26 , HORVU7Hr1G030930.8 , HORVU7Hr1G030930.9 , HORVU7Hr1G030930.6 , HORVU7Hr1G030930.7 , HORVU7Hr1G030930.4 , HORVU7Hr1G030930.5 , HORVU7Hr1G030930.2 , HORVU7Hr1G030930.3 , HORVU7Hr1G030930.1 , HORVU7Hr1G030930.14 , HORVU7Hr1G030930.15 , HORVU7Hr1G030930.16 , HORVU7Hr1G030930.17 , HORVU7Hr1G030930.10 , HORVU7Hr1G030930.11 , HORVU7Hr1G030930.12 , HORVU7Hr1G030930.13 , HORVU7Hr1G030930.18 , HORVU7Hr1G030930.19
Wheat TraesCS7D02G152900 , TraesCS7D02G152900 , TraesCS7A02G151000 , TraesCS7A02G151000 , TraesCS7B02G055000 , TraesCS7B02G055000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G420300 zinc finger protein, putative, expressed -
2 Sobic.009G212100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
3 Sobic.009G052100 tubulin/FtsZ domain containing protein, putative, expressed K10389: tubulin gamma
4 Sobic.003G226700 kinesin motor domain containing protein, putative, expressed K10393: KIF2_24, kinesin family member 2/24
5 Sobic.003G292700 kinesin motor protein-related, putative, expressed K10406: kinesin family member C2/C3
6 Sobic.008G083500 expressed protein -
7 Sobic.002G320600 HEAT repeat family protein, putative, expressed -
8 Sobic.007G084200 expressed protein -
9 Sobic.002G351700 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
10 Sobic.008G096200 AGC_PVPK_like_kin82y.19 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
11 Sobic.006G071628 - -
12 Sobic.009G061000 DNA binding protein, putative, expressed -
13 Sobic.003G289800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
14 Sobic.001G487200 zinc finger, C3HC4 type domain containing protein, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
15 Sobic.003G412800 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein -
16 Sobic.001G507200 PIR, putative, expressed K05749: cytoplasmic FMR1 interacting protein
17 Sobic.006G267500 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
18 Sobic.002G383100 expressed protein -
19 Sobic.004G315700 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
20 Sobic.001G051300 BEE 1, putative, expressed -


Gene co-expression network
sample Sobic010G067600 Sobic010G067600 Sobic003G420300 Sobic003G420300 Sobic010G067600--Sobic003G420300 Sobic009G212100 Sobic009G212100 Sobic010G067600--Sobic009G212100 Sobic009G052100 Sobic009G052100 Sobic010G067600--Sobic009G052100 Sobic003G226700 Sobic003G226700 Sobic010G067600--Sobic003G226700 Sobic003G292700 Sobic003G292700 Sobic010G067600--Sobic003G292700 Sobic008G083500 Sobic008G083500 Sobic010G067600--Sobic008G083500 Sobic002G320600 Sobic002G320600 Sobic010G067600--Sobic002G320600 Sobic007G084200 Sobic007G084200 Sobic010G067600--Sobic007G084200 Sobic002G351700 Sobic002G351700 Sobic010G067600--Sobic002G351700 Sobic003G420300--Sobic003G292700 Sobic003G420300--Sobic003G226700 Sobic003G420300--Sobic008G083500 Sobic003G420300--Sobic010G067600 Sobic003G289800 Sobic003G289800 Sobic003G420300--Sobic003G289800 Sobic004G315700 Sobic004G315700 Sobic003G420300--Sobic004G315700 Sobic003G420300--Sobic002G320600 Sobic003G420300--Sobic007G084200 Sobic003G420300--Sobic009G052100 Sobic001G487200 Sobic001G487200 Sobic009G212100--Sobic001G487200 Sobic009G212100--Sobic004G315700 Sobic001G296800 Sobic001G296800 Sobic009G212100--Sobic001G296800 Sobic009G212100--Sobic003G226700 Sobic009G212100--Sobic007G084200 Sobic006G267500 Sobic006G267500 Sobic009G212100--Sobic006G267500 Sobic006G084300 Sobic006G084300 Sobic009G212100--Sobic006G084300 Sobic001G369800 Sobic001G369800 Sobic009G212100--Sobic001G369800 Sobic006G254500 Sobic006G254500 Sobic009G212100--Sobic006G254500 Sobic009G052100--Sobic004G315700 Sobic004G156200 Sobic004G156200 Sobic009G052100--Sobic004G156200 Sobic001G507200 Sobic001G507200 Sobic009G052100--Sobic001G507200 Sobic009G049200 Sobic009G049200 Sobic009G052100--Sobic009G049200 Sobic006G071628 Sobic006G071628 Sobic009G052100--Sobic006G071628 Sobic010G250800 Sobic010G250800 Sobic009G052100--Sobic010G250800 Sobic003G315700 Sobic003G315700 Sobic009G052100--Sobic003G315700 Sobic010G252700 Sobic010G252700 Sobic009G052100--Sobic010G252700 Sobic009G052100--Sobic003G420300 Sobic003G226700--Sobic007G084200 Sobic003G226700--Sobic003G420300 Sobic003G226700--Sobic003G292700 Sobic001G425700 Sobic001G425700 Sobic003G226700--Sobic001G425700 Sobic003G226700--Sobic003G289800 Sobic003G226700--Sobic009G212100 Sobic003G226700--Sobic001G487200 Sobic003G226700--Sobic004G315700 Sobic003G024000 Sobic003G024000 Sobic003G226700--Sobic003G024000 Sobic003G292700--Sobic003G420300 Sobic003G292700--Sobic003G226700 Sobic009G202801 Sobic009G202801 Sobic003G292700--Sobic009G202801 Sobic001G054700 Sobic001G054700 Sobic003G292700--Sobic001G054700 Sobic006G142500 Sobic006G142500 Sobic003G292700--Sobic006G142500 Sobic003G032200 Sobic003G032200 Sobic003G292700--Sobic003G032200 Sobic001G377700 Sobic001G377700 Sobic003G292700--Sobic001G377700 Sobic002G021200 Sobic002G021200 Sobic003G292700--Sobic002G021200 Sobic003G292700--Sobic008G083500 Sobic002G296000 Sobic002G296000 Sobic008G083500--Sobic002G296000 Sobic008G083500--Sobic003G420300 Sobic010G024500 Sobic010G024500 Sobic008G083500--Sobic010G024500 Sobic006G105600 Sobic006G105600 Sobic008G083500--Sobic006G105600 Sobic001G304800 Sobic001G304800 Sobic008G083500--Sobic001G304800 Sobic009G101100 Sobic009G101100 Sobic008G083500--Sobic009G101100 Sobic002G286700 Sobic002G286700 Sobic008G083500--Sobic002G286700 Sobic008G083500--Sobic003G292700 Sobic008G083500--Sobic001G054700 Sobic003G031700 Sobic003G031700 Sobic002G320600--Sobic003G031700 Sobic001G201000 Sobic001G201000 Sobic002G320600--Sobic001G201000 Sobic002G320600--Sobic003G420300 Sobic002G320600--Sobic003G292700 Sobic010G211800 Sobic010G211800 Sobic002G320600--Sobic010G211800 Sobic002G362700 Sobic002G362700 Sobic002G320600--Sobic002G362700 Sobic002G320600--Sobic003G226700 Sobic008G127550 Sobic008G127550 Sobic002G320600--Sobic008G127550 Sobic004G328300 Sobic004G328300 Sobic002G320600--Sobic004G328300 Sobic007G084200--Sobic003G226700 Sobic007G084200--Sobic009G212100 Sobic007G084200--Sobic003G420300 Sobic007G084200--Sobic001G487200 Sobic003G345000 Sobic003G345000 Sobic007G084200--Sobic003G345000 Sobic007G084200--Sobic003G292700 Sobic006G218900 Sobic006G218900 Sobic007G084200--Sobic006G218900 Sobic007G084200--Sobic001G369800 Sobic007G084200--Sobic004G315700 Sobic002G351700--Sobic003G226700 Sobic004G321400 Sobic004G321400 Sobic002G351700--Sobic004G321400 Sobic002G351700--Sobic003G289800 Sobic001G051300 Sobic001G051300 Sobic002G351700--Sobic001G051300 Sobic001G123100 Sobic001G123100 Sobic002G351700--Sobic001G123100 Sobic003G412800 Sobic003G412800 Sobic002G351700--Sobic003G412800 Sobic002G351700--Sobic003G292700 Sobic002G351700--Sobic003G420300 Sobic002G383100 Sobic002G383100 Sobic002G351700--Sobic002G383100
Octagon: transcription factors


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