Gene annotation
Transcriptome id Sobic.003G420300.1,Sobic.003G420300.2
Synonym Sb03g045360
Functional annotation zinc finger protein, putative, expressed
UniProt A0A1W0W1E0 , C5XHQ8
Pfam -
Panther DB PTHR33826 PTHR33826:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G56590 : hydroxyproline-rich glycoprotein family protein
RAP-DB (Rice) LOC_Os01g71220.1 : zinc finger protein, putative, expressed
MaizeGDB (Corn) Zm00025a026088 , Zm00025a039164
Brachypodium KQK11451
Barley HORVU3Hr1G102030.1 , HORVU3Hr1G102030.3 , HORVU3Hr1G102030.2 , HORVU3Hr1G102030.5 , HORVU3Hr1G102030.4 , HORVU3Hr1G102030.6
Wheat TraesCS3D02G470700 , TraesCS3A02G474300 , TraesCS3B02G517900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G292700 kinesin motor protein-related, putative, expressed K10406: kinesin family member C2/C3
2 Sobic.003G226700 kinesin motor domain containing protein, putative, expressed K10393: KIF2_24, kinesin family member 2/24
3 Sobic.008G083500 expressed protein -
4 Sobic.010G067600 expressed protein K16586: HAUS augmin-like complex subunit 3
5 Sobic.003G289800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
6 Sobic.004G315700 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
7 Sobic.002G320600 HEAT repeat family protein, putative, expressed -
8 Sobic.007G084200 expressed protein -
9 Sobic.009G052100 tubulin/FtsZ domain containing protein, putative, expressed K10389: tubulin gamma
10 Sobic.009G212100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
11 Sobic.001G425700 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
12 Sobic.006G281400 expressed protein -
13 Sobic.003G031700 protein kinase family protein, putative, expressed -
14 Sobic.008G127550 - -
15 Sobic.001G487200 zinc finger, C3HC4 type domain containing protein, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
16 Sobic.003G024000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide-N4-asparagine amidase A, putative, expressed -
17 Sobic.002G383100 expressed protein -
18 Sobic.002G296000 HEAT repeat family protein, putative, expressed -
19 Sobic.003G345000 CAMK_CAMK_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
20 Sobic.009G202801 - K10406: kinesin family member C2/C3


Gene co-expression network
sample Sobic003G420300 Sobic003G420300 Sobic003G292700 Sobic003G292700 Sobic003G420300--Sobic003G292700 Sobic003G226700 Sobic003G226700 Sobic003G420300--Sobic003G226700 Sobic008G083500 Sobic008G083500 Sobic003G420300--Sobic008G083500 Sobic010G067600 Sobic010G067600 Sobic003G420300--Sobic010G067600 Sobic003G289800 Sobic003G289800 Sobic003G420300--Sobic003G289800 Sobic004G315700 Sobic004G315700 Sobic003G420300--Sobic004G315700 Sobic002G320600 Sobic002G320600 Sobic003G420300--Sobic002G320600 Sobic007G084200 Sobic007G084200 Sobic003G420300--Sobic007G084200 Sobic009G052100 Sobic009G052100 Sobic003G420300--Sobic009G052100 Sobic003G292700--Sobic003G420300 Sobic003G292700--Sobic003G226700 Sobic009G202801 Sobic009G202801 Sobic003G292700--Sobic009G202801 Sobic001G054700 Sobic001G054700 Sobic003G292700--Sobic001G054700 Sobic006G142500 Sobic006G142500 Sobic003G292700--Sobic006G142500 Sobic003G032200 Sobic003G032200 Sobic003G292700--Sobic003G032200 Sobic001G377700 Sobic001G377700 Sobic003G292700--Sobic001G377700 Sobic002G021200 Sobic002G021200 Sobic003G292700--Sobic002G021200 Sobic003G292700--Sobic008G083500 Sobic003G226700--Sobic007G084200 Sobic003G226700--Sobic003G420300 Sobic003G226700--Sobic003G292700 Sobic001G425700 Sobic001G425700 Sobic003G226700--Sobic001G425700 Sobic003G226700--Sobic003G289800 Sobic009G212100 Sobic009G212100 Sobic003G226700--Sobic009G212100 Sobic001G487200 Sobic001G487200 Sobic003G226700--Sobic001G487200 Sobic003G226700--Sobic004G315700 Sobic003G024000 Sobic003G024000 Sobic003G226700--Sobic003G024000 Sobic002G296000 Sobic002G296000 Sobic008G083500--Sobic002G296000 Sobic008G083500--Sobic003G420300 Sobic010G024500 Sobic010G024500 Sobic008G083500--Sobic010G024500 Sobic006G105600 Sobic006G105600 Sobic008G083500--Sobic006G105600 Sobic001G304800 Sobic001G304800 Sobic008G083500--Sobic001G304800 Sobic009G101100 Sobic009G101100 Sobic008G083500--Sobic009G101100 Sobic002G286700 Sobic002G286700 Sobic008G083500--Sobic002G286700 Sobic008G083500--Sobic003G292700 Sobic008G083500--Sobic001G054700 Sobic010G067600--Sobic003G420300 Sobic010G067600--Sobic009G212100 Sobic010G067600--Sobic009G052100 Sobic010G067600--Sobic003G226700 Sobic010G067600--Sobic003G292700 Sobic010G067600--Sobic008G083500 Sobic010G067600--Sobic002G320600 Sobic010G067600--Sobic007G084200 Sobic002G351700 Sobic002G351700 Sobic010G067600--Sobic002G351700 Sobic002G383100 Sobic002G383100 Sobic003G289800--Sobic002G383100 Sobic009G087000 Sobic009G087000 Sobic003G289800--Sobic009G087000 Sobic001G051300 Sobic001G051300 Sobic003G289800--Sobic001G051300 Sobic003G183700 Sobic003G183700 Sobic003G289800--Sobic003G183700 Sobic003G289800--Sobic003G420300 Sobic003G179500 Sobic003G179500 Sobic003G289800--Sobic003G179500 Sobic005G110535 Sobic005G110535 Sobic003G289800--Sobic005G110535 Sobic003G389100 Sobic003G389100 Sobic003G289800--Sobic003G389100 Sobic010G147700 Sobic010G147700 Sobic003G289800--Sobic010G147700 Sobic004G315700--Sobic001G487200 Sobic004G315700--Sobic009G212100 Sobic001G296800 Sobic001G296800 Sobic004G315700--Sobic001G296800 Sobic004G315700--Sobic009G052100 Sobic006G084300 Sobic006G084300 Sobic004G315700--Sobic006G084300 Sobic004G315700--Sobic003G420300 Sobic006G218900 Sobic006G218900 Sobic004G315700--Sobic006G218900 Sobic003G345000 Sobic003G345000 Sobic004G315700--Sobic003G345000 Sobic001G540700 Sobic001G540700 Sobic004G315700--Sobic001G540700 Sobic003G031700 Sobic003G031700 Sobic002G320600--Sobic003G031700 Sobic001G201000 Sobic001G201000 Sobic002G320600--Sobic001G201000 Sobic002G320600--Sobic003G420300 Sobic002G320600--Sobic003G292700 Sobic010G211800 Sobic010G211800 Sobic002G320600--Sobic010G211800 Sobic002G362700 Sobic002G362700 Sobic002G320600--Sobic002G362700 Sobic002G320600--Sobic003G226700 Sobic008G127550 Sobic008G127550 Sobic002G320600--Sobic008G127550 Sobic004G328300 Sobic004G328300 Sobic002G320600--Sobic004G328300 Sobic007G084200--Sobic003G226700 Sobic007G084200--Sobic009G212100 Sobic007G084200--Sobic003G420300 Sobic007G084200--Sobic001G487200 Sobic007G084200--Sobic003G345000 Sobic007G084200--Sobic003G292700 Sobic007G084200--Sobic006G218900 Sobic001G369800 Sobic001G369800 Sobic007G084200--Sobic001G369800 Sobic007G084200--Sobic004G315700 Sobic009G052100--Sobic004G315700 Sobic004G156200 Sobic004G156200 Sobic009G052100--Sobic004G156200 Sobic001G507200 Sobic001G507200 Sobic009G052100--Sobic001G507200 Sobic009G049200 Sobic009G049200 Sobic009G052100--Sobic009G049200 Sobic006G071628 Sobic006G071628 Sobic009G052100--Sobic006G071628 Sobic010G250800 Sobic010G250800 Sobic009G052100--Sobic010G250800 Sobic003G315700 Sobic003G315700 Sobic009G052100--Sobic003G315700 Sobic010G252700 Sobic010G252700 Sobic009G052100--Sobic010G252700 Sobic009G052100--Sobic003G420300
Octagon: transcription factors


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