Gene annotation
Transcriptome id Sobic.002G296000.1
Synonym Sb02g032725
Functional annotation HEAT repeat family protein, putative, expressed
UniProt C5X8D6
Pfam -
Panther DB PTHR31355 PTHR31355:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G07170 : ARM repeat superfamily protein
RAP-DB (Rice) LOC_Os09g38710.1 : HEAT repeat family protein, putative, expressed
MaizeGDB (Corn) Zm00025a004631 , Zm00025a025867 , Zm00025a047882
Brachypodium KQJ91471 , KQJ91470 , KQJ91472
Barley -
Wheat TraesCS5B02G365600 , TraesCS5D02G372700 , TraesCS5A02G363500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G027900 chloroplast unusual positioning protein, putative, expressed -
2 Sobic.006G124400 ATP binding protein, putative, expressed -
3 Sobic.009G101100 patellin protein, putative, expressed -
4 Sobic.007G168900 kinesin motor domain containing protein, putative, expressed K10398: KIF11, kinesin family member 11
5 Sobic.005G005700 inactive receptor kinase At2g26730 precursor, putative, expressed -
6 Sobic.008G006800 inactive receptor kinase At2g26730 precursor, putative, expressed -
7 Sobic.004G271300 DNA topoisomerase 2, putative, expressed K03164: DNA topoisomerase II
8 Sobic.010G017400 DLT(Ortholog in rice:Tong et al. (2012))(PubMedID : 31659927)@DELLA protein SLR1, putative, expressed -
9 Sobic.008G083500 expressed protein -
10 Sobic.010G105400 chromosome condensation protein like, putative, expressed K06678: YCG1, condensin complex subunit 3
11 Sobic.001G304800 expressed protein -
12 Sobic.005G000500 kinesin motor domain containing protein, putative, expressed K10398: KIF11, kinesin family member 11
13 Sobic.001G398400 expressed protein -
14 Sobic.003G032200 IQ calmodulin-binding motif domain containing protein, expressed -
15 Sobic.006G105600 "domain confirmed by Pfam database, expression is supported by NCBI EST database, expressed in leaf, stem and root, expression induced by IAA treatment"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
16 Sobic.002G204400 kinesin motor protein-related, putative, expressed K11498: centromeric protein E
17 Sobic.001G116900 expressed protein -
18 Sobic.005G144600 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
19 Sobic.003G423600 expressed protein K06228: fused
20 Sobic.010G147700 WD domain, G-beta repeat domain containing protein, expressed K11274: WDHD1, chromosome transmission fidelity protein 4


Gene co-expression network
sample Sobic002G296000 Sobic002G296000 Sobic007G027900 Sobic007G027900 Sobic002G296000--Sobic007G027900 Sobic006G124400 Sobic006G124400 Sobic002G296000--Sobic006G124400 Sobic009G101100 Sobic009G101100 Sobic002G296000--Sobic009G101100 Sobic007G168900 Sobic007G168900 Sobic002G296000--Sobic007G168900 Sobic005G005700 Sobic005G005700 Sobic002G296000--Sobic005G005700 Sobic008G006800 Sobic008G006800 Sobic002G296000--Sobic008G006800 Sobic004G271300 Sobic004G271300 Sobic002G296000--Sobic004G271300 Sobic010G017400 Sobic010G017400 Sobic002G296000--Sobic010G017400 Sobic008G083500 Sobic008G083500 Sobic002G296000--Sobic008G083500 Sobic007G027900--Sobic002G296000 Sobic007G027900--Sobic005G005700 Sobic007G027900--Sobic004G271300 Sobic007G027900--Sobic009G101100 Sobic002G204400 Sobic002G204400 Sobic007G027900--Sobic002G204400 Sobic007G027900--Sobic006G124400 Sobic007G027900--Sobic008G006800 Sobic007G027900--Sobic007G168900 Sobic001G398400 Sobic001G398400 Sobic007G027900--Sobic001G398400 Sobic006G124400--Sobic002G296000 Sobic010G105400 Sobic010G105400 Sobic006G124400--Sobic010G105400 Sobic006G124400--Sobic009G101100 Sobic006G124400--Sobic007G027900 Sobic004G273000 Sobic004G273000 Sobic006G124400--Sobic004G273000 Sobic006G124400--Sobic005G005700 Sobic006G124400--Sobic008G006800 Sobic001G477400 Sobic001G477400 Sobic006G124400--Sobic001G477400 Sobic006G124400--Sobic001G398400 Sobic009G101100--Sobic002G296000 Sobic009G101100--Sobic006G124400 Sobic009G101100--Sobic007G027900 Sobic003G032200 Sobic003G032200 Sobic009G101100--Sobic003G032200 Sobic006G221300 Sobic006G221300 Sobic009G101100--Sobic006G221300 Sobic001G304800 Sobic001G304800 Sobic009G101100--Sobic001G304800 Sobic009G101100--Sobic008G083500 Sobic006G105600 Sobic006G105600 Sobic009G101100--Sobic006G105600 Sobic009G101100--Sobic010G105400 Sobic005G000500 Sobic005G000500 Sobic007G168900--Sobic005G000500 Sobic005G144600 Sobic005G144600 Sobic007G168900--Sobic005G144600 Sobic007G168900--Sobic004G271300 Sobic001G177900 Sobic001G177900 Sobic007G168900--Sobic001G177900 Sobic003G314900 Sobic003G314900 Sobic007G168900--Sobic003G314900 Sobic003G294500 Sobic003G294500 Sobic007G168900--Sobic003G294500 Sobic003G260700 Sobic003G260700 Sobic007G168900--Sobic003G260700 Sobic010G008900 Sobic010G008900 Sobic007G168900--Sobic010G008900 Sobic010G147700 Sobic010G147700 Sobic007G168900--Sobic010G147700 Sobic005G005700--Sobic008G006800 Sobic005G005700--Sobic004G271300 Sobic005G005700--Sobic010G017400 Sobic005G005700--Sobic002G296000 Sobic005G005700--Sobic001G398400 Sobic010G119300 Sobic010G119300 Sobic005G005700--Sobic010G119300 Sobic005G005700--Sobic003G260700 Sobic005G005700--Sobic007G027900 Sobic005G005700--Sobic007G168900 Sobic008G006800--Sobic005G005700 Sobic008G006800--Sobic010G119300 Sobic008G006800--Sobic003G260700 Sobic008G006800--Sobic001G398400 Sobic004G339500 Sobic004G339500 Sobic008G006800--Sobic004G339500 Sobic008G006800--Sobic010G017400 Sobic008G006800--Sobic004G271300 Sobic002G313000 Sobic002G313000 Sobic008G006800--Sobic002G313000 Sobic008G006800--Sobic002G296000 Sobic004G271300--Sobic007G168900 Sobic004G271300--Sobic005G000500 Sobic004G271300--Sobic003G260700 Sobic001G170800 Sobic001G170800 Sobic004G271300--Sobic001G170800 Sobic004G271300--Sobic005G005700 Sobic004G271300--Sobic001G398400 Sobic004G271300--Sobic008G006800 Sobic004G271300--Sobic001G177900 Sobic004G271300--Sobic005G144600 Sobic010G017400--Sobic008G006800 Sobic010G017400--Sobic005G005700 Sobic010G017400--Sobic002G296000 Sobic010G017400--Sobic001G170800 Sobic010G017400--Sobic001G177900 Sobic010G017400--Sobic001G398400 Sobic010G017400--Sobic004G271300 Sobic010G017400--Sobic007G168900 Sobic010G017400--Sobic010G008900 Sobic008G083500--Sobic002G296000 Sobic003G420300 Sobic003G420300 Sobic008G083500--Sobic003G420300 Sobic010G024500 Sobic010G024500 Sobic008G083500--Sobic010G024500 Sobic008G083500--Sobic006G105600 Sobic008G083500--Sobic001G304800 Sobic008G083500--Sobic009G101100 Sobic002G286700 Sobic002G286700 Sobic008G083500--Sobic002G286700 Sobic003G292700 Sobic003G292700 Sobic008G083500--Sobic003G292700 Sobic001G054700 Sobic001G054700 Sobic008G083500--Sobic001G054700
Octagon: transcription factors


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