Gene annotation
Transcriptome id Sobic.006G105600.1
Synonym P-glycoprotein, ABCB19, MDR1, SbPGP16, ATMDR11, MDR11, Sb06g018860, ATABCB19, PGP19, ATPGP19, ATMDR1
Functional annotation "domain confirmed by Pfam database, expression is supported by NCBI EST database, expressed in leaf, stem and root, expression induced by IAA treatment" (PubMedID : 20528920)
multidrug resistance protein, putative, expressed
UniProt C5Y9T7
Pfam PF00005 PF00664
Panther DB PTHR24221 PTHR24221:SF267
NCBI CDD -
KEGG Orthology K05658; ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
Gene Ontology GO:0016887; ATPase activity GO:0005524ATP binding GO:0016021integral component of membrane GO:0006810transport


Orthologs (automatic annotation)
TAIR AT3G28860 : ATP binding cassette subfamily B19
RAP-DB (Rice) LOC_Os04g38570.1 : multidrug resistance protein, putative, expressed
MaizeGDB (Corn) Zm00025a057176 , Zm00025a028841 , Zm00025a056200 , Zm00025a032376 , Zm00025a005528 , Zm00025a009581
Brachypodium KQJ84902 , KQJ82960 , PNT61226
Barley HORVU2Hr1G080200.10 , HORVU2Hr1G080200.11 , HORVU2Hr1G080200.12 , HORVU2Hr1G080200.13 , HORVU2Hr1G115180.1 , HORVU2Hr1G115180.2 , HORVU2Hr1G115180.3 , HORVU2Hr1G115180.4 , HORVU2Hr1G115180.5 , HORVU2Hr1G115180.7 , HORVU2Hr1G080200.8 , HORVU2Hr1G080200.9 , HORVU2Hr1G080200.2 , HORVU2Hr1G080200.3 , HORVU2Hr1G080200.1 , HORVU2Hr1G080200.6 , HORVU2Hr1G080200.7 , HORVU2Hr1G080200.4 , HORVU2Hr1G080200.5
Wheat TraesCS2D02G523100 , TraesCS2D02G523100 , TraesCS2A02G521400 , TraesCS2A02G521400 , TraesCS2A02G521400 , TraesCS2B02G550700 , TraesCS2B02G341800 , TraesCS2B02G341800 , TraesCS3B02G136800 , TraesCS3A02G117600 , TraesCS2D02G322600 , TraesCS2A02G344300
Populus PNS95833 , PNS95834


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G091000 receptor protein kinase CLAVATA1 precursor, putative, expressed -
2 Sobic.001G267100 "domain confirmed by Pfam database, expressed in leaf, flower, stem and root, expression induced by BR and ABA treatments"(PubMedID : 20528920)@transmembrane amino acid transporter protein, putative, expressed K13946: AUX1, auxin influx carrier (AUX1 LAX family)
3 Sobic.006G124400 ATP binding protein, putative, expressed -
4 Sobic.002G296000 HEAT repeat family protein, putative, expressed -
5 Sobic.009G137500 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
6 Sobic.002G394500 proline-rich family protein, putative, expressed -
7 Sobic.004G233700 glycosyl hydrolase family 3 protein, putative, expressed -
8 Sobic.008G083500 expressed protein -
9 Sobic.001G304800 expressed protein -
10 Sobic.009G101100 patellin protein, putative, expressed -
11 Sobic.010G192500 anthranilate phosphoribosyltransferase, putative, expressed -
12 Sobic.002G278200 thaumatin, putative, expressed -
13 Sobic.010G241100 thaumatin family domain containing protein, expressed -
14 Sobic.008G006800 inactive receptor kinase At2g26730 precursor, putative, expressed -
15 Sobic.002G286700 lysM domain-containing GPI-anchored protein precursor, putative, expressed -
16 Sobic.001G381100 receptor-like protein kinase precursor, putative, expressed -
17 Sobic.002G224200 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
18 Sobic.001G160000 LSTK-1-like kinase, putative, expressed K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5
19 Sobic.003G366000 DUF623 domain containing protein, expressed -
20 Sobic.001G140600 expressed protein -


Gene co-expression network
sample Sobic006G105600 Sobic006G105600 Sobic005G091000 Sobic005G091000 Sobic006G105600--Sobic005G091000 Sobic001G267100 Sobic001G267100 Sobic006G105600--Sobic001G267100 Sobic006G124400 Sobic006G124400 Sobic006G105600--Sobic006G124400 Sobic002G296000 Sobic002G296000 Sobic006G105600--Sobic002G296000 Sobic009G137500 Sobic009G137500 Sobic006G105600--Sobic009G137500 Sobic002G394500 Sobic002G394500 Sobic006G105600--Sobic002G394500 Sobic004G233700 Sobic004G233700 Sobic006G105600--Sobic004G233700 Sobic008G083500 Sobic008G083500 Sobic006G105600--Sobic008G083500 Sobic001G304800 Sobic001G304800 Sobic006G105600--Sobic001G304800 Sobic002G032500 Sobic002G032500 Sobic005G091000--Sobic002G032500 Sobic005G091000--Sobic006G105600 Sobic005G091000--Sobic001G267100 Sobic003G309400 Sobic003G309400 Sobic005G091000--Sobic003G309400 Sobic003G089300 Sobic003G089300 Sobic005G091000--Sobic003G089300 Sobic003G338200 Sobic003G338200 Sobic005G091000--Sobic003G338200 Sobic001G381100 Sobic001G381100 Sobic005G091000--Sobic001G381100 Sobic002G224200 Sobic002G224200 Sobic005G091000--Sobic002G224200 Sobic006G074900 Sobic006G074900 Sobic005G091000--Sobic006G074900 Sobic006G187000 Sobic006G187000 Sobic001G267100--Sobic006G187000 Sobic001G267100--Sobic005G091000 Sobic001G145200 Sobic001G145200 Sobic001G267100--Sobic001G145200 Sobic001G267100--Sobic006G105600 Sobic001G267100--Sobic009G137500 Sobic001G267100--Sobic001G381100 Sobic001G345200 Sobic001G345200 Sobic001G267100--Sobic001G345200 Sobic004G168600 Sobic004G168600 Sobic001G267100--Sobic004G168600 Sobic001G267100--Sobic006G074900 Sobic006G124400--Sobic002G296000 Sobic010G105400 Sobic010G105400 Sobic006G124400--Sobic010G105400 Sobic009G101100 Sobic009G101100 Sobic006G124400--Sobic009G101100 Sobic007G027900 Sobic007G027900 Sobic006G124400--Sobic007G027900 Sobic004G273000 Sobic004G273000 Sobic006G124400--Sobic004G273000 Sobic005G005700 Sobic005G005700 Sobic006G124400--Sobic005G005700 Sobic008G006800 Sobic008G006800 Sobic006G124400--Sobic008G006800 Sobic001G477400 Sobic001G477400 Sobic006G124400--Sobic001G477400 Sobic001G398400 Sobic001G398400 Sobic006G124400--Sobic001G398400 Sobic002G296000--Sobic007G027900 Sobic002G296000--Sobic006G124400 Sobic002G296000--Sobic009G101100 Sobic007G168900 Sobic007G168900 Sobic002G296000--Sobic007G168900 Sobic002G296000--Sobic005G005700 Sobic002G296000--Sobic008G006800 Sobic004G271300 Sobic004G271300 Sobic002G296000--Sobic004G271300 Sobic010G017400 Sobic010G017400 Sobic002G296000--Sobic010G017400 Sobic002G296000--Sobic008G083500 Sobic009G137500--Sobic006G187000 Sobic009G137500--Sobic001G267100 Sobic009G137500--Sobic006G105600 Sobic006G255300 Sobic006G255300 Sobic009G137500--Sobic006G255300 Sobic003G366000 Sobic003G366000 Sobic009G137500--Sobic003G366000 Sobic003G016200 Sobic003G016200 Sobic009G137500--Sobic003G016200 Sobic001G276800 Sobic001G276800 Sobic009G137500--Sobic001G276800 Sobic008G150500 Sobic008G150500 Sobic009G137500--Sobic008G150500 Sobic001G046400 Sobic001G046400 Sobic009G137500--Sobic001G046400 Sobic001G155700 Sobic001G155700 Sobic002G394500--Sobic001G155700 Sobic006G219500 Sobic006G219500 Sobic002G394500--Sobic006G219500 Sobic010G241100 Sobic010G241100 Sobic002G394500--Sobic010G241100 Sobic002G394500--Sobic006G105600 Sobic002G319300 Sobic002G319300 Sobic002G394500--Sobic002G319300 Sobic010G192500 Sobic010G192500 Sobic002G394500--Sobic010G192500 Sobic003G260700 Sobic003G260700 Sobic002G394500--Sobic003G260700 Sobic008G114900 Sobic008G114900 Sobic002G394500--Sobic008G114900 Sobic002G313000 Sobic002G313000 Sobic002G394500--Sobic002G313000 Sobic009G208900 Sobic009G208900 Sobic004G233700--Sobic009G208900 Sobic004G233700--Sobic006G105600 Sobic005G025900 Sobic005G025900 Sobic004G233700--Sobic005G025900 Sobic003G420100 Sobic003G420100 Sobic004G233700--Sobic003G420100 Sobic002G142200 Sobic002G142200 Sobic004G233700--Sobic002G142200 Sobic005G144600 Sobic005G144600 Sobic004G233700--Sobic005G144600 Sobic007G113300 Sobic007G113300 Sobic004G233700--Sobic007G113300 Sobic004G233700--Sobic007G168900 Sobic004G233700--Sobic002G296000 Sobic008G083500--Sobic002G296000 Sobic003G420300 Sobic003G420300 Sobic008G083500--Sobic003G420300 Sobic010G024500 Sobic010G024500 Sobic008G083500--Sobic010G024500 Sobic008G083500--Sobic006G105600 Sobic008G083500--Sobic001G304800 Sobic008G083500--Sobic009G101100 Sobic002G286700 Sobic002G286700 Sobic008G083500--Sobic002G286700 Sobic003G292700 Sobic003G292700 Sobic008G083500--Sobic003G292700 Sobic001G054700 Sobic001G054700 Sobic008G083500--Sobic001G054700 Sobic001G304800--Sobic002G296000 Sobic001G304800--Sobic002G286700 Sobic001G304800--Sobic008G083500 Sobic001G304800--Sobic009G101100 Sobic001G304800--Sobic006G105600 Sobic007G218100 Sobic007G218100 Sobic001G304800--Sobic007G218100 Sobic003G246800 Sobic003G246800 Sobic001G304800--Sobic003G246800 Sobic009G146250 Sobic009G146250 Sobic001G304800--Sobic009G146250 Sobic001G304800--Sobic006G124400
Octagon: transcription factors


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