Gene annotation
Transcriptome id Sobic.004G233700.2,Sobic.004G233700.1
Synonym Sb04g027700
Functional annotation glycosyl hydrolase family 3 protein, putative, expressed
UniProt C5XYP5 , A0A1Z5RNS7
Pfam PF14310 PF00933 PF01915
Panther DB PTHR30620 PTHR30620:SF45
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT1G78060 : Glycosyl hydrolase family protein
RAP-DB (Rice) LOC_Os02g51620.1 : glycosyl hydrolase family 3 protein, putative, expressed
MaizeGDB (Corn) Zm00025a055973 , Zm00025a057161 , Zm00025a022120 , Zm00025a029154 , Zm00025a033705 , Zm00025a033706
Brachypodium KQK01876 , KQJ84878 , PNT69619 , PNT63716
Barley HORVU4Hr1G003910.1 , HORVU4Hr1G003910.2 , HORVU4Hr1G069100.10 , HORVU6Hr1G075010.1 , HORVU6Hr1G075010.6 , HORVU6Hr1G075010.5 , HORVU6Hr1G075010.4 , HORVU6Hr1G075010.9 , HORVU6Hr1G075010.3 , HORVU6Hr1G075010.2 , HORVU6Hr1G075010.7 , HORVU4Hr1G069100.6 , HORVU4Hr1G069100.7 , HORVU4Hr1G069100.4 , HORVU4Hr1G069100.5 , HORVU4Hr1G069100.2 , HORVU4Hr1G069100.3 , HORVU4Hr1G069100.1 , HORVU4Hr1G069100.8 , HORVU4Hr1G069100.9 , HORVU6Hr1G075010.18 , HORVU6Hr1G075010.13 , HORVU6Hr1G075010.12 , HORVU6Hr1G075010.11 , HORVU6Hr1G075010.10 , HORVU6Hr1G075010.17 , HORVU6Hr1G075010.16 , HORVU6Hr1G075010.15 , HORVU6Hr1G075010.14
Wheat TraesCS4D02G072800 , TraesCS4D02G072800 , TraesCS4B02G026100 , TraesCS4A02G052200 , TraesCS4A02G288700 , TraesCS6B02G331300 , TraesCS6B02G331300 , TraesCS6B02G331300 , TraesCS6D02G281600 , TraesCS6D02G281600 , TraesCS6D02G281600 , TraesCS3D02G479300 , TraesCS3D02G479300 , TraesCS4D02G023500 , TraesCS4D02G252100 , TraesCS4B02G252100 , TraesCS4B02G252100 , TraesCS3B02G531300
Populus -


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cDNA sequences
Sobic.004G233700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G208900 expressed protein -
2 Sobic.006G105600 "domain confirmed by Pfam database, expression is supported by NCBI EST database, expressed in leaf, stem and root, expression induced by IAA treatment"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
3 Sobic.005G025900 "domain confirmed by Pfam database, expression supported by NCBI EST database,expressed in leaf, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein
4 Sobic.003G420100 RNA recognition motif containing protein, putative, expressed K13207: CUGBP, BRUNOL, CUG-BP- and ETR3-like factor
5 Sobic.002G142200 expressed protein -
6 Sobic.005G144600 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
7 Sobic.007G113300 BRASSINOSTEROID INSENSITIVE 1 precursor, putative, expressed -
8 Sobic.007G168900 kinesin motor domain containing protein, putative, expressed K10398: KIF11, kinesin family member 11
9 Sobic.002G296000 HEAT repeat family protein, putative, expressed -
10 Sobic.004G263700 expressed protein -
11 Sobic.001G304800 expressed protein -
12 Sobic.003G410600 exostosin family domain containing protein, expressed -
13 Sobic.002G278200 thaumatin, putative, expressed -
14 Sobic.010G104400 cysteine-rich repeat secretory protein precursor, putative, expressed -
15 Sobic.001G177900 Kinesin motor domain domain containing protein, expressed K10400: kinesin family member 15
16 Sobic.003G179500 expressed protein K06676: BRRN1, BRN1, condensin complex subunit 2
17 Sobic.009G101100 patellin protein, putative, expressed -
18 Sobic.003G294500 dynamin family protein, putative, expressed -
19 Sobic.007G208100 heavy metal-associated domain containing protein, expressed -
20 Sobic.004G287700 expressed protein -


Gene co-expression network
sample Sobic004G233700 Sobic004G233700 Sobic009G208900 Sobic009G208900 Sobic004G233700--Sobic009G208900 Sobic006G105600 Sobic006G105600 Sobic004G233700--Sobic006G105600 Sobic005G025900 Sobic005G025900 Sobic004G233700--Sobic005G025900 Sobic003G420100 Sobic003G420100 Sobic004G233700--Sobic003G420100 Sobic002G142200 Sobic002G142200 Sobic004G233700--Sobic002G142200 Sobic005G144600 Sobic005G144600 Sobic004G233700--Sobic005G144600 Sobic007G113300 Sobic007G113300 Sobic004G233700--Sobic007G113300 Sobic007G168900 Sobic007G168900 Sobic004G233700--Sobic007G168900 Sobic002G296000 Sobic002G296000 Sobic004G233700--Sobic002G296000 Sobic009G208900--Sobic004G233700 Sobic009G208900--Sobic005G144600 Sobic009G208900--Sobic002G142200 Sobic003G179500 Sobic003G179500 Sobic009G208900--Sobic003G179500 Sobic010G274000 Sobic010G274000 Sobic009G208900--Sobic010G274000 Sobic003G410600 Sobic003G410600 Sobic009G208900--Sobic003G410600 Sobic009G208900--Sobic007G168900 Sobic004G047100 Sobic004G047100 Sobic009G208900--Sobic004G047100 Sobic001G177900 Sobic001G177900 Sobic009G208900--Sobic001G177900 Sobic005G091000 Sobic005G091000 Sobic006G105600--Sobic005G091000 Sobic001G267100 Sobic001G267100 Sobic006G105600--Sobic001G267100 Sobic006G124400 Sobic006G124400 Sobic006G105600--Sobic006G124400 Sobic006G105600--Sobic002G296000 Sobic009G137500 Sobic009G137500 Sobic006G105600--Sobic009G137500 Sobic002G394500 Sobic002G394500 Sobic006G105600--Sobic002G394500 Sobic006G105600--Sobic004G233700 Sobic008G083500 Sobic008G083500 Sobic006G105600--Sobic008G083500 Sobic001G304800 Sobic001G304800 Sobic006G105600--Sobic001G304800 Sobic005G025900--Sobic004G233700 Sobic007G050500 Sobic007G050500 Sobic005G025900--Sobic007G050500 Sobic001G144200 Sobic001G144200 Sobic005G025900--Sobic001G144200 Sobic007G111700 Sobic007G111700 Sobic005G025900--Sobic007G111700 Sobic002G158900 Sobic002G158900 Sobic005G025900--Sobic002G158900 Sobic001G355900 Sobic001G355900 Sobic005G025900--Sobic001G355900 Sobic005G231300 Sobic005G231300 Sobic005G025900--Sobic005G231300 Sobic002G016400 Sobic002G016400 Sobic005G025900--Sobic002G016400 Sobic001G402400 Sobic001G402400 Sobic005G025900--Sobic001G402400 Sobic003G247600 Sobic003G247600 Sobic003G420100--Sobic003G247600 Sobic003G420100--Sobic004G233700 Sobic009G242501 Sobic009G242501 Sobic003G420100--Sobic009G242501 Sobic007G208100 Sobic007G208100 Sobic003G420100--Sobic007G208100 Sobic004G286700 Sobic004G286700 Sobic003G420100--Sobic004G286700 Sobic005G047100 Sobic005G047100 Sobic003G420100--Sobic005G047100 Sobic008G141200 Sobic008G141200 Sobic003G420100--Sobic008G141200 Sobic004G066900 Sobic004G066900 Sobic003G420100--Sobic004G066900 Sobic003G135400 Sobic003G135400 Sobic003G420100--Sobic003G135400 Sobic002G142200--Sobic007G168900 Sobic010G017400 Sobic010G017400 Sobic002G142200--Sobic010G017400 Sobic002G142200--Sobic001G177900 Sobic001G029800 Sobic001G029800 Sobic002G142200--Sobic001G029800 Sobic002G142200--Sobic005G144600 Sobic004G287700 Sobic004G287700 Sobic002G142200--Sobic004G287700 Sobic003G294500 Sobic003G294500 Sobic002G142200--Sobic003G294500 Sobic003G314900 Sobic003G314900 Sobic002G142200--Sobic003G314900 Sobic002G142200--Sobic009G208900 Sobic005G144600--Sobic007G168900 Sobic010G105400 Sobic010G105400 Sobic005G144600--Sobic010G105400 Sobic005G144600--Sobic003G294500 Sobic005G000500 Sobic005G000500 Sobic005G144600--Sobic005G000500 Sobic005G144600--Sobic003G314900 Sobic005G144600--Sobic001G177900 Sobic005G144600--Sobic004G047100 Sobic004G271300 Sobic004G271300 Sobic005G144600--Sobic004G271300 Sobic005G144600--Sobic003G179500 Sobic007G113300--Sobic004G233700 Sobic002G218600 Sobic002G218600 Sobic007G113300--Sobic002G218600 Sobic008G100700 Sobic008G100700 Sobic007G113300--Sobic008G100700 Sobic007G113300--Sobic001G304800 Sobic007G113300--Sobic004G286700 Sobic010G067800 Sobic010G067800 Sobic007G113300--Sobic010G067800 Sobic010G103700 Sobic010G103700 Sobic007G113300--Sobic010G103700 Sobic007G113300--Sobic003G179500 Sobic008G090000 Sobic008G090000 Sobic007G113300--Sobic008G090000 Sobic007G168900--Sobic005G000500 Sobic007G168900--Sobic005G144600 Sobic007G168900--Sobic004G271300 Sobic007G168900--Sobic001G177900 Sobic007G168900--Sobic003G314900 Sobic007G168900--Sobic003G294500 Sobic003G260700 Sobic003G260700 Sobic007G168900--Sobic003G260700 Sobic010G008900 Sobic010G008900 Sobic007G168900--Sobic010G008900 Sobic010G147700 Sobic010G147700 Sobic007G168900--Sobic010G147700 Sobic007G027900 Sobic007G027900 Sobic002G296000--Sobic007G027900 Sobic002G296000--Sobic006G124400 Sobic009G101100 Sobic009G101100 Sobic002G296000--Sobic009G101100 Sobic002G296000--Sobic007G168900 Sobic005G005700 Sobic005G005700 Sobic002G296000--Sobic005G005700 Sobic008G006800 Sobic008G006800 Sobic002G296000--Sobic008G006800 Sobic002G296000--Sobic004G271300 Sobic002G296000--Sobic010G017400 Sobic002G296000--Sobic008G083500
Octagon: transcription factors


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