Gene annotation
Transcriptome id Sobic.004G263700.1
Synonym Sb04g030180
Functional annotation expressed protein
UniProt C5Y077
Pfam -
Panther DB PTHR34056 PTHR34056:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G18050 : -
RAP-DB (Rice) LOC_Os02g48094.1 : expressed protein
MaizeGDB (Corn) Zm00025a032495 , Zm00025a024605 , Zm00025a021760
Brachypodium PNT69298
Barley HORVU6Hr1G069750.4 , HORVU6Hr1G069750.1 , HORVU6Hr1G069750.3 , HORVU6Hr1G069750.2
Wheat TraesCS6B02G303900 , TraesCS6D02G256800 , TraesCS6A02G276400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G260701 -(PubMedID : 26976818) -
2 Sobic.001G261400 STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed -
3 Sobic.002G218600 Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed -
4 Sobic.004G233700 glycosyl hydrolase family 3 protein, putative, expressed -
5 Sobic.001G304800 expressed protein -
6 Sobic.007G113300 BRASSINOSTEROID INSENSITIVE 1 precursor, putative, expressed -
7 Sobic.002G230900 cyclin, putative, expressed K18810: cyclin D1/2/4, plant
8 Sobic.006G073800 DUF623 domain containing protein, expressed -
9 Sobic.004G029450 - -
10 Sobic.004G311600 lysM domain-containing GPI-anchored protein precursor, putative, expressed -
11 Sobic.001G078700 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
12 Sobic.007G218100 transmembrane receptor, putative, expressed -
13 Sobic.006G105600 "domain confirmed by Pfam database, expression is supported by NCBI EST database, expressed in leaf, stem and root, expression induced by IAA treatment"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
14 Sobic.008G027700 RALFL23 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
15 Sobic.009G208900 expressed protein -
16 Sobic.010G134900 DNA binding protein, putative, expressed -
17 Sobic.002G286700 lysM domain-containing GPI-anchored protein precursor, putative, expressed -
18 Sobic.010G090100 phosphoglycerate mutase, putative, expressed K01834: PGAM, 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
19 Sobic.003G300900 AAA-type ATPase family protein, putative, expressed K07767: katanin p60 ATPase-containing subunit A1
20 Sobic.003G179500 expressed protein K06676: BRRN1, BRN1, condensin complex subunit 2


Gene co-expression network
sample Sobic004G263700 Sobic004G263700 Sobic001G260701 Sobic001G260701 Sobic004G263700--Sobic001G260701 Sobic001G261400 Sobic001G261400 Sobic004G263700--Sobic001G261400 Sobic002G218600 Sobic002G218600 Sobic004G263700--Sobic002G218600 Sobic004G233700 Sobic004G233700 Sobic004G263700--Sobic004G233700 Sobic001G304800 Sobic001G304800 Sobic004G263700--Sobic001G304800 Sobic007G113300 Sobic007G113300 Sobic004G263700--Sobic007G113300 Sobic002G230900 Sobic002G230900 Sobic004G263700--Sobic002G230900 Sobic006G073800 Sobic006G073800 Sobic004G263700--Sobic006G073800 Sobic004G029450 Sobic004G029450 Sobic004G263700--Sobic004G029450 Sobic001G260701--Sobic004G263700 Sobic001G260701--Sobic001G304800 Sobic002G286700 Sobic002G286700 Sobic001G260701--Sobic002G286700 Sobic006G105600 Sobic006G105600 Sobic001G260701--Sobic006G105600 Sobic001G260701--Sobic004G233700 Sobic008G083500 Sobic008G083500 Sobic001G260701--Sobic008G083500 Sobic003G179500 Sobic003G179500 Sobic001G260701--Sobic003G179500 Sobic001G260701--Sobic002G218600 Sobic004G066900 Sobic004G066900 Sobic001G260701--Sobic004G066900 Sobic010G134900 Sobic010G134900 Sobic001G261400--Sobic010G134900 Sobic004G214300 Sobic004G214300 Sobic001G261400--Sobic004G214300 Sobic009G102400 Sobic009G102400 Sobic001G261400--Sobic009G102400 Sobic001G261400--Sobic004G263700 Sobic001G261400--Sobic002G230900 Sobic006G124200 Sobic006G124200 Sobic001G261400--Sobic006G124200 Sobic001G261400--Sobic002G218600 Sobic010G177300 Sobic010G177300 Sobic001G261400--Sobic010G177300 Sobic010G155100 Sobic010G155100 Sobic001G261400--Sobic010G155100 Sobic002G218600--Sobic004G263700 Sobic002G218600--Sobic001G261400 Sobic009G146250 Sobic009G146250 Sobic002G218600--Sobic009G146250 Sobic002G218600--Sobic007G113300 Sobic002G218600--Sobic002G230900 Sobic006G120600 Sobic006G120600 Sobic002G218600--Sobic006G120600 Sobic010G103700 Sobic010G103700 Sobic002G218600--Sobic010G103700 Sobic002G218600--Sobic001G304800 Sobic002G218600--Sobic003G179500 Sobic009G208900 Sobic009G208900 Sobic004G233700--Sobic009G208900 Sobic004G233700--Sobic006G105600 Sobic005G025900 Sobic005G025900 Sobic004G233700--Sobic005G025900 Sobic003G420100 Sobic003G420100 Sobic004G233700--Sobic003G420100 Sobic002G142200 Sobic002G142200 Sobic004G233700--Sobic002G142200 Sobic005G144600 Sobic005G144600 Sobic004G233700--Sobic005G144600 Sobic004G233700--Sobic007G113300 Sobic007G168900 Sobic007G168900 Sobic004G233700--Sobic007G168900 Sobic002G296000 Sobic002G296000 Sobic004G233700--Sobic002G296000 Sobic001G304800--Sobic002G296000 Sobic001G304800--Sobic002G286700 Sobic001G304800--Sobic008G083500 Sobic009G101100 Sobic009G101100 Sobic001G304800--Sobic009G101100 Sobic001G304800--Sobic006G105600 Sobic007G218100 Sobic007G218100 Sobic001G304800--Sobic007G218100 Sobic003G246800 Sobic003G246800 Sobic001G304800--Sobic003G246800 Sobic001G304800--Sobic009G146250 Sobic006G124400 Sobic006G124400 Sobic001G304800--Sobic006G124400 Sobic007G113300--Sobic004G233700 Sobic007G113300--Sobic002G218600 Sobic008G100700 Sobic008G100700 Sobic007G113300--Sobic008G100700 Sobic007G113300--Sobic001G304800 Sobic004G286700 Sobic004G286700 Sobic007G113300--Sobic004G286700 Sobic010G067800 Sobic010G067800 Sobic007G113300--Sobic010G067800 Sobic007G113300--Sobic010G103700 Sobic007G113300--Sobic003G179500 Sobic008G090000 Sobic008G090000 Sobic007G113300--Sobic008G090000 Sobic002G230900--Sobic001G261400 Sobic002G230900--Sobic002G218600 Sobic004G311600 Sobic004G311600 Sobic002G230900--Sobic004G311600 Sobic002G230900--Sobic007G218100 Sobic002G230900--Sobic001G304800 Sobic002G230900--Sobic004G263700 Sobic006G013300 Sobic006G013300 Sobic002G230900--Sobic006G013300 Sobic002G230900--Sobic006G073800 Sobic002G230900--Sobic006G124200 Sobic006G255300 Sobic006G255300 Sobic006G073800--Sobic006G255300 Sobic006G073800--Sobic004G263700 Sobic006G073800--Sobic002G230900 Sobic006G073800--Sobic001G261400 Sobic001G276800 Sobic001G276800 Sobic006G073800--Sobic001G276800 Sobic006G073800--Sobic002G218600 Sobic006G073800--Sobic001G304800 Sobic006G016700 Sobic006G016700 Sobic006G073800--Sobic006G016700 Sobic006G073800--Sobic004G311600 Sobic003G019400 Sobic003G019400 Sobic004G029450--Sobic003G019400 Sobic004G029450--Sobic004G263700 Sobic004G029450--Sobic001G261400 Sobic010G090100 Sobic010G090100 Sobic004G029450--Sobic010G090100 Sobic006G130600 Sobic006G130600 Sobic004G029450--Sobic006G130600 Sobic008G170500 Sobic008G170500 Sobic004G029450--Sobic008G170500 Sobic003G300900 Sobic003G300900 Sobic004G029450--Sobic003G300900 Sobic004G029450--Sobic006G124200 Sobic004G029450--Sobic002G230900
Octagon: transcription factors


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