Gene annotation
Transcriptome id Sobic.001G078700.1
Synonym SbDof10, Sb01g007110, DNA binding with One Finger, OBP2
Functional annotation Homologous to Dof genes in Arabidopsis and rice. (PubMedID : 21161392)
dof zinc finger domain containing protein, putative, expressed
UniProt C5WZA7 , A0A1B6QHT9 , H6VSX2 , R4N7V9
Pfam PF02701
Panther DB PTHR31992 PTHR31992:SF29
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT1G07640 : Dof-type zinc finger DNA-binding family protein
RAP-DB (Rice) LOC_Os03g55610.1 : dof zinc finger domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a049197 , Zm00025a004485 , Zm00025a016425 , Zm00025a009285 , Zm00025a047370 , Zm00025a017356 , Zm00025a007115 , Zm00025a032602 , Zm00025a007401 , Zm00025a023031 , Zm00025a052752 , Zm00025a006464 , Zm00025a039572 , Zm00025a016727 , Zm00025a002866 , Zm00025a014147 , Zm00025a021740 , Zm00025a017302 , Zm00025a001854 , Zm00025a000851 , Zm00025a021884 , Zm00025a032473 , Zm00025a057389 , Zm00025a014756 , Zm00025a008288 , Zm00025a004967 , Zm00025a048181 , Zm00025a026723 , Zm00025a043793
Brachypodium KQK22335 , KQK14158 , PNT73247 , PNT69224 , KQK00955 , KQK16070 , KQK13036 , PNT65625 , PNT65624 , KQJ98766 , PNT69485 , KQJ90639 , KQK03138 , KQK06036 , KQK14319 , KQK23432 , KQK00737 , KQJ84092 , KQK00738
Barley HORVU2Hr1G013060.1 , HORVU2Hr1G119160.6 , HORVU2Hr1G119160.4 , HORVU2Hr1G119160.2 , HORVU2Hr1G119160.3 , HORVU2Hr1G119160.1 , HORVU1Hr1G044560.1 , HORVU4Hr1G074990.3 , HORVU4Hr1G074990.2 , HORVU4Hr1G074990.1 , HORVU1Hr1G074140.1 , HORVU3Hr1G083460.1 , HORVU4Hr1G013890.1 , HORVU6Hr1G065250.4 , HORVU6Hr1G065250.5 , HORVU6Hr1G065250.6 , HORVU6Hr1G065250.7 , HORVU5Hr1G048700.1 , HORVU6Hr1G065250.2 , HORVU6Hr1G065250.3 , HORVU6Hr1G065250.8 , HORVU6Hr1G065250.9 , HORVU2Hr1G119110.3 , HORVU2Hr1G119110.7 , HORVU2Hr1G119110.6 , HORVU2Hr1G119110.5 , HORVU2Hr1G119110.4 , HORVU2Hr1G119110.9 , HORVU2Hr1G119110.8 , HORVU6Hr1G065250.1 , HORVU5Hr1G097620.1 , HORVU7Hr1G043250.2 , HORVU5Hr1G097600.1 , HORVU6Hr1G065250.10
Wheat TraesCS5B02G154100 , TraesCS2A02G402200 , TraesCS4B02G206800 , TraesCS2D02G563000 , TraesCS4A02G097800 , TraesCS5A02G155900 , TraesCS4B02G286400 , TraesCS6D02G236700 , TraesCS2D02G563200 , TraesCS6B02G301500 , TraesCS2B02G592600 , TraesCS4D02G207600 , TraesCS2D02G399500 , TraesCS2B02G592900 , TraesCS2A02G590800 , TraesCS2B02G592800 , TraesCS4A02G017700 , TraesCS6A02G274000 , TraesCS2B02G592700 , TraesCS4D02G285100 , TraesCS2A02G591200 , TraesCS5D02G161000 , TraesCS6D02G254200 , TraesCS6B02G270100 , TraesCS2D02G563400 , TraesCS2B02G420400 , TraesCS6A02G255500
Populus PNT43441


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G102900 expressed protein -
2 Sobic.003G034600 CAMK_CAMK_like_Aur_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
3 Sobic.003G107200 SNF7 domain containing protein, putative, expressed K12198: CHMP5, charged multivesicular body protein 5
4 Sobic.003G307400 EF hand family protein, putative, expressed K13448: calcium-binding protein CML
5 Sobic.004G263700 expressed protein -
6 Sobic.006G200000 RNA recognition motif, putative, expressed -
7 Sobic.010G190300 lipid phosphatase protein, putative, expressed -
8 Sobic.003G300900 AAA-type ATPase family protein, putative, expressed K07767: katanin p60 ATPase-containing subunit A1
9 Sobic.010G138300 DUF617 domain containing protein, expressed -
10 Sobic.001G542200 expansin precursor, putative, expressed -
11 Sobic.006G120700 N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase, putative, expressed K03434: N-acetylglucosaminylphosphatidylinositol deacetylase
12 Sobic.009G021700 expressed protein -
13 Sobic.002G226500 "SG1(Ortholog in rice:Nakagawa et al., 2012)"(PubMedID : 31659856)@expressed protein -
14 Sobic.003G340100 "domain confirmed by Pfam database, expressed in leaf, expression induced by BR treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
15 Sobic.001G295800 expressed protein -
16 Sobic.001G260701 -(PubMedID : 26976818) -
17 Sobic.010G144900 fiber protein Fb34, putative, expressed -
18 Sobic.009G181500 Up-reguralion under heat(PubMedID : 24916767)@cyclin, putative, expressed -
19 Sobic.006G218000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.002G236700 TMV-MP30 binding protein 2C, putative, expressed -


Gene co-expression network
sample Sobic001G078700 Sobic001G078700 Sobic006G102900 Sobic006G102900 Sobic001G078700--Sobic006G102900 Sobic003G034600 Sobic003G034600 Sobic001G078700--Sobic003G034600 Sobic003G107200 Sobic003G107200 Sobic001G078700--Sobic003G107200 Sobic003G307400 Sobic003G307400 Sobic001G078700--Sobic003G307400 Sobic004G263700 Sobic004G263700 Sobic001G078700--Sobic004G263700 Sobic006G200000 Sobic006G200000 Sobic001G078700--Sobic006G200000 Sobic010G190300 Sobic010G190300 Sobic001G078700--Sobic010G190300 Sobic003G300900 Sobic003G300900 Sobic001G078700--Sobic003G300900 Sobic010G138300 Sobic010G138300 Sobic001G078700--Sobic010G138300 Sobic001G078600 Sobic001G078600 Sobic006G102900--Sobic001G078600 Sobic006G102900--Sobic003G107200 Sobic009G181500 Sobic009G181500 Sobic006G102900--Sobic009G181500 Sobic001G261549 Sobic001G261549 Sobic006G102900--Sobic001G261549 Sobic007G154500 Sobic007G154500 Sobic006G102900--Sobic007G154500 Sobic002G426800 Sobic002G426800 Sobic006G102900--Sobic002G426800 Sobic010G274000 Sobic010G274000 Sobic006G102900--Sobic010G274000 Sobic004G047100 Sobic004G047100 Sobic006G102900--Sobic004G047100 Sobic009G189200 Sobic009G189200 Sobic006G102900--Sobic009G189200 Sobic004G217450 Sobic004G217450 Sobic003G034600--Sobic004G217450 Sobic003G122200 Sobic003G122200 Sobic003G034600--Sobic003G122200 Sobic001G475500 Sobic001G475500 Sobic003G034600--Sobic001G475500 Sobic003G034600--Sobic003G307400 Sobic006G191800 Sobic006G191800 Sobic003G034600--Sobic006G191800 Sobic003G034600--Sobic006G200000 Sobic003G160700 Sobic003G160700 Sobic003G034600--Sobic003G160700 Sobic009G173500 Sobic009G173500 Sobic003G034600--Sobic009G173500 Sobic007G150800 Sobic007G150800 Sobic003G034600--Sobic007G150800 Sobic003G107200--Sobic006G102900 Sobic002G246900 Sobic002G246900 Sobic003G107200--Sobic002G246900 Sobic003G107200--Sobic004G047100 Sobic003G107200--Sobic009G181500 Sobic003G107200--Sobic001G261549 Sobic003G107200--Sobic007G154500 Sobic003G107200--Sobic001G078600 Sobic002G236700 Sobic002G236700 Sobic003G107200--Sobic002G236700 Sobic003G107200--Sobic002G426800 Sobic003G307400--Sobic010G138300 Sobic001G514200 Sobic001G514200 Sobic003G307400--Sobic001G514200 Sobic003G121000 Sobic003G121000 Sobic003G307400--Sobic003G121000 Sobic006G119000 Sobic006G119000 Sobic003G307400--Sobic006G119000 Sobic008G135300 Sobic008G135300 Sobic003G307400--Sobic008G135300 Sobic003G307400--Sobic003G034600 Sobic001G522700 Sobic001G522700 Sobic003G307400--Sobic001G522700 Sobic001G295800 Sobic001G295800 Sobic003G307400--Sobic001G295800 Sobic008G102800 Sobic008G102800 Sobic003G307400--Sobic008G102800 Sobic001G260701 Sobic001G260701 Sobic004G263700--Sobic001G260701 Sobic001G261400 Sobic001G261400 Sobic004G263700--Sobic001G261400 Sobic002G218600 Sobic002G218600 Sobic004G263700--Sobic002G218600 Sobic004G233700 Sobic004G233700 Sobic004G263700--Sobic004G233700 Sobic001G304800 Sobic001G304800 Sobic004G263700--Sobic001G304800 Sobic007G113300 Sobic007G113300 Sobic004G263700--Sobic007G113300 Sobic002G230900 Sobic002G230900 Sobic004G263700--Sobic002G230900 Sobic006G073800 Sobic006G073800 Sobic004G263700--Sobic006G073800 Sobic004G029450 Sobic004G029450 Sobic004G263700--Sobic004G029450 Sobic006G120700 Sobic006G120700 Sobic006G200000--Sobic006G120700 Sobic005G080900 Sobic005G080900 Sobic006G200000--Sobic005G080900 Sobic003G396600 Sobic003G396600 Sobic006G200000--Sobic003G396600 Sobic010G265900 Sobic010G265900 Sobic006G200000--Sobic010G265900 Sobic006G200000--Sobic003G034600 Sobic010G115200 Sobic010G115200 Sobic006G200000--Sobic010G115200 Sobic006G083000 Sobic006G083000 Sobic006G200000--Sobic006G083000 Sobic006G200000--Sobic003G300900 Sobic001G410200 Sobic001G410200 Sobic006G200000--Sobic001G410200 Sobic010G190300--Sobic003G300900 Sobic010G190300--Sobic001G410200 Sobic003G340100 Sobic003G340100 Sobic010G190300--Sobic003G340100 Sobic009G111400 Sobic009G111400 Sobic010G190300--Sobic009G111400 Sobic010G190300--Sobic006G200000 Sobic004G234100 Sobic004G234100 Sobic010G190300--Sobic004G234100 Sobic004G258900 Sobic004G258900 Sobic010G190300--Sobic004G258900 Sobic003G360100 Sobic003G360100 Sobic010G190300--Sobic003G360100 Sobic009G181800 Sobic009G181800 Sobic010G190300--Sobic009G181800 Sobic008G170500 Sobic008G170500 Sobic003G300900--Sobic008G170500 Sobic003G300900--Sobic010G190300 Sobic008G135500 Sobic008G135500 Sobic003G300900--Sobic008G135500 Sobic003G128700 Sobic003G128700 Sobic003G300900--Sobic003G128700 Sobic003G300900--Sobic001G410200 Sobic003G300900--Sobic006G200000 Sobic001G397000 Sobic001G397000 Sobic003G300900--Sobic001G397000 Sobic006G245500 Sobic006G245500 Sobic003G300900--Sobic006G245500 Sobic010G090100 Sobic010G090100 Sobic003G300900--Sobic010G090100 Sobic010G138300--Sobic001G514200 Sobic009G199001 Sobic009G199001 Sobic010G138300--Sobic009G199001 Sobic010G138300--Sobic008G102800 Sobic009G221500 Sobic009G221500 Sobic010G138300--Sobic009G221500 Sobic001G245800 Sobic001G245800 Sobic010G138300--Sobic001G245800 Sobic009G074500 Sobic009G074500 Sobic010G138300--Sobic009G074500 Sobic010G138300--Sobic003G340100 Sobic007G050200 Sobic007G050200 Sobic010G138300--Sobic007G050200 Sobic006G227500 Sobic006G227500 Sobic010G138300--Sobic006G227500
Octagon: transcription factors


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