Gene annotation
Transcriptome id Sobic.002G236700.2,Sobic.002G236700.1
Synonym Sb02g027490, MPB2C
Functional annotation TMV-MP30 binding protein 2C, putative, expressed
UniProt C5X347
Pfam -
Panther DB PTHR35502 PTHR35502:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G08120 : movement protein binding protein 2C
RAP-DB (Rice) LOC_Os09g29970.1 : TMV-MP30 binding protein 2C, putative, expressed
MaizeGDB (Corn) Zm00025a047371
Brachypodium -
Barley HORVU5Hr1G070930.10 , HORVU5Hr1G070930.1 , HORVU5Hr1G070930.2 , HORVU5Hr1G070930.3 , HORVU5Hr1G070930.4 , HORVU5Hr1G070930.5 , HORVU5Hr1G070930.6 , HORVU5Hr1G070930.7 , HORVU5Hr1G070930.8 , HORVU5Hr1G070930.9
Wheat TraesCS5A02G252200 , TraesCS5B02G251000 , TraesCS5D02G259800
Populus -


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cDNA sequences
Sobic.002G236700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G246900 expressed protein -
2 Sobic.001G140700 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
3 Sobic.001G532800 RNA recognition motif containing protein, putative, expressed K12893: splicing factor, arginine/serine-rich 4/5/6
4 Sobic.003G107200 SNF7 domain containing protein, putative, expressed K12198: CHMP5, charged multivesicular body protein 5
5 Sobic.009G109300 POLA4 - Putative DNA polymerase alpha complex subunit, expressed K02684: DNA primase small subunit
6 Sobic.007G112100 enoyl-acyl-carrier-protein reductase NADH, chloroplast precursor, expressed K00208: enoyl-[acyl-carrier protein] reductase I
7 Sobic.002G315400 expressed protein -
8 Sobic.007G218100 transmembrane receptor, putative, expressed -
9 Sobic.010G191000 expressed protein -
10 Sobic.003G072900 OsRhmbd18 - Putative Rhomboid homologue, expressed -
11 Sobic.004G032900 wee1-like protein kinase, putative, expressed K06632: wee1-like protein kinase
12 Sobic.001G255600 endonuclease/Exonuclease/phosphatase family protein, expressed -
13 Sobic.009G189200 secretory carrier-associated membrane protein, putative, expressed -
14 Sobic.006G102900 expressed protein -
15 Sobic.002G230800 expressed protein -
16 Sobic.006G094100 expressed protein -
17 Sobic.010G144900 fiber protein Fb34, putative, expressed -
18 Sobic.006G120700 N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase, putative, expressed K03434: N-acetylglucosaminylphosphatidylinositol deacetylase
19 Sobic.004G095700 cysteine synthase, putative, expressed K01738: cysteine synthase
20 Sobic.001G521100 POLD2 - Putative DNA polymerase delta complex subunit, expressed K02328: DNA polymerase delta subunit 2


Gene co-expression network
sample Sobic002G236700 Sobic002G236700 Sobic002G246900 Sobic002G246900 Sobic002G236700--Sobic002G246900 Sobic001G140700 Sobic001G140700 Sobic002G236700--Sobic001G140700 Sobic001G532800 Sobic001G532800 Sobic002G236700--Sobic001G532800 Sobic003G107200 Sobic003G107200 Sobic002G236700--Sobic003G107200 Sobic009G109300 Sobic009G109300 Sobic002G236700--Sobic009G109300 Sobic007G112100 Sobic007G112100 Sobic002G236700--Sobic007G112100 Sobic002G315400 Sobic002G315400 Sobic002G236700--Sobic002G315400 Sobic007G218100 Sobic007G218100 Sobic002G236700--Sobic007G218100 Sobic010G191000 Sobic010G191000 Sobic002G236700--Sobic010G191000 Sobic004G047100 Sobic004G047100 Sobic002G246900--Sobic004G047100 Sobic010G105400 Sobic010G105400 Sobic002G246900--Sobic010G105400 Sobic002G246900--Sobic010G191000 Sobic002G246900--Sobic003G107200 Sobic001G238900 Sobic001G238900 Sobic002G246900--Sobic001G238900 Sobic009G181500 Sobic009G181500 Sobic002G246900--Sobic009G181500 Sobic002G246900--Sobic002G236700 Sobic001G169800 Sobic001G169800 Sobic002G246900--Sobic001G169800 Sobic002G230800 Sobic002G230800 Sobic002G246900--Sobic002G230800 Sobic007G125300 Sobic007G125300 Sobic001G140700--Sobic007G125300 Sobic004G069400 Sobic004G069400 Sobic001G140700--Sobic004G069400 Sobic006G094100 Sobic006G094100 Sobic001G140700--Sobic006G094100 Sobic001G140700--Sobic002G236700 Sobic003G212600 Sobic003G212600 Sobic001G140700--Sobic003G212600 Sobic001G268300 Sobic001G268300 Sobic001G140700--Sobic001G268300 Sobic006G120600 Sobic006G120600 Sobic001G140700--Sobic006G120600 Sobic009G087300 Sobic009G087300 Sobic001G140700--Sobic009G087300 Sobic010G250400 Sobic010G250400 Sobic001G140700--Sobic010G250400 Sobic001G532800--Sobic007G218100 Sobic001G532800--Sobic007G112100 Sobic001G532800--Sobic002G236700 Sobic001G532800--Sobic010G250400 Sobic001G532800--Sobic002G230800 Sobic002G158500 Sobic002G158500 Sobic001G532800--Sobic002G158500 Sobic003G147500 Sobic003G147500 Sobic001G532800--Sobic003G147500 Sobic001G532800--Sobic009G109300 Sobic008G100700 Sobic008G100700 Sobic001G532800--Sobic008G100700 Sobic006G102900 Sobic006G102900 Sobic003G107200--Sobic006G102900 Sobic003G107200--Sobic002G246900 Sobic003G107200--Sobic004G047100 Sobic003G107200--Sobic009G181500 Sobic001G261549 Sobic001G261549 Sobic003G107200--Sobic001G261549 Sobic007G154500 Sobic007G154500 Sobic003G107200--Sobic007G154500 Sobic001G078600 Sobic001G078600 Sobic003G107200--Sobic001G078600 Sobic003G107200--Sobic002G236700 Sobic002G426800 Sobic002G426800 Sobic003G107200--Sobic002G426800 Sobic009G109300--Sobic007G112100 Sobic006G051000 Sobic006G051000 Sobic009G109300--Sobic006G051000 Sobic010G103700 Sobic010G103700 Sobic009G109300--Sobic010G103700 Sobic006G195500 Sobic006G195500 Sobic009G109300--Sobic006G195500 Sobic009G109300--Sobic001G238900 Sobic009G109300--Sobic002G230800 Sobic003G183700 Sobic003G183700 Sobic009G109300--Sobic003G183700 Sobic003G179500 Sobic003G179500 Sobic009G109300--Sobic003G179500 Sobic009G109300--Sobic002G246900 Sobic007G112100--Sobic009G109300 Sobic007G112100--Sobic001G532800 Sobic004G032900 Sobic004G032900 Sobic007G112100--Sobic004G032900 Sobic007G112100--Sobic002G158500 Sobic007G112100--Sobic002G236700 Sobic007G112100--Sobic006G120600 Sobic007G112100--Sobic001G140700 Sobic002G304400 Sobic002G304400 Sobic007G112100--Sobic002G304400 Sobic007G079600 Sobic007G079600 Sobic007G112100--Sobic007G079600 Sobic001G521100 Sobic001G521100 Sobic002G315400--Sobic001G521100 Sobic002G092200 Sobic002G092200 Sobic002G315400--Sobic002G092200 Sobic002G351100 Sobic002G351100 Sobic002G315400--Sobic002G351100 Sobic002G315400--Sobic002G236700 Sobic002G315400--Sobic009G109300 Sobic003G412800 Sobic003G412800 Sobic002G315400--Sobic003G412800 Sobic003G297200 Sobic003G297200 Sobic002G315400--Sobic003G297200 Sobic002G315400--Sobic002G246900 Sobic002G315400--Sobic007G112100 Sobic007G218100--Sobic001G532800 Sobic001G304800 Sobic001G304800 Sobic007G218100--Sobic001G304800 Sobic004G052200 Sobic004G052200 Sobic007G218100--Sobic004G052200 Sobic007G218100--Sobic002G230800 Sobic003G246800 Sobic003G246800 Sobic007G218100--Sobic003G246800 Sobic006G275500 Sobic006G275500 Sobic007G218100--Sobic006G275500 Sobic002G392500 Sobic002G392500 Sobic007G218100--Sobic002G392500 Sobic001G104500 Sobic001G104500 Sobic007G218100--Sobic001G104500 Sobic008G159901 Sobic008G159901 Sobic007G218100--Sobic008G159901 Sobic010G191000--Sobic003G179500 Sobic010G191000--Sobic002G246900 Sobic010G191000--Sobic010G105400 Sobic010G191000--Sobic004G047100 Sobic010G051100 Sobic010G051100 Sobic010G191000--Sobic010G051100 Sobic010G191000--Sobic002G230800 Sobic005G144600 Sobic005G144600 Sobic010G191000--Sobic005G144600 Sobic001G255600 Sobic001G255600 Sobic010G191000--Sobic001G255600 Sobic010G191000--Sobic006G102900
Octagon: transcription factors


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