Gene annotation
Transcriptome id Sobic.006G094100.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6PL61
Pfam -
Panther DB PTHR35730 PTHR35730:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G08880 : -
RAP-DB (Rice) LOC_Os04g36780.1 : expressed protein
MaizeGDB (Corn) Zm00025a056139
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G290500 protein kinase family protein, putative, expressed K14500: BR-signaling kinase
2 Sobic.006G275500 regulator of chromosome condensation, putative, expressed -
3 Sobic.001G140700 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
4 Sobic.009G109300 POLA4 - Putative DNA polymerase alpha complex subunit, expressed K02684: DNA primase small subunit
5 Sobic.004G330600 GHMP kinases ATP-binding protein, putative, expressed K01597: MVD, diphosphomevalonate decarboxylase
6 Sobic.009G188900 acyltransferase, putative, expressed K13513: LCLAT1, lysocardiolipin and lysophospholipid acyltransferase
7 Sobic.002G230800 expressed protein -
8 Sobic.010G250400 OsSub52 - Putative Subtilisin homologue, expressed -
9 Sobic.006G196600 expressed protein -
10 Sobic.002G021200 expressed protein K19001: HELLS, ATP-dependent DNA helicase
11 Sobic.001G104500 growth-regulating factor, putative, expressed -
12 Sobic.001G377700 expressed protein K10895: fanconi anemia group I protein
13 Sobic.003G147500 PHS1, putative, expressed K14165: atypical dual specificity phosphatase
14 Sobic.002G168000 expressed protein -
15 Sobic.002G236700 TMV-MP30 binding protein 2C, putative, expressed -
16 Sobic.001G532800 RNA recognition motif containing protein, putative, expressed K12893: splicing factor, arginine/serine-rich 4/5/6
17 Sobic.006G120600 AAA-type ATPase family protein, putative, expressed -
18 Sobic.007G187700 retinoblastoma-related protein-like, putative, expressed K04681: retinoblastoma-like protein 1
19 Sobic.006G281900 down-regulated TF in developmental senescence(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
20 Sobic.007G218100 transmembrane receptor, putative, expressed -


Gene co-expression network
sample Sobic006G094100 Sobic006G094100 Sobic001G290500 Sobic001G290500 Sobic006G094100--Sobic001G290500 Sobic006G275500 Sobic006G275500 Sobic006G094100--Sobic006G275500 Sobic001G140700 Sobic001G140700 Sobic006G094100--Sobic001G140700 Sobic009G109300 Sobic009G109300 Sobic006G094100--Sobic009G109300 Sobic004G330600 Sobic004G330600 Sobic006G094100--Sobic004G330600 Sobic009G188900 Sobic009G188900 Sobic006G094100--Sobic009G188900 Sobic002G230800 Sobic002G230800 Sobic006G094100--Sobic002G230800 Sobic010G250400 Sobic010G250400 Sobic006G094100--Sobic010G250400 Sobic006G196600 Sobic006G196600 Sobic006G094100--Sobic006G196600 Sobic009G077300 Sobic009G077300 Sobic001G290500--Sobic009G077300 Sobic001G290500--Sobic006G094100 Sobic006G281900 Sobic006G281900 Sobic001G290500--Sobic006G281900 Sobic003G283600 Sobic003G283600 Sobic001G290500--Sobic003G283600 Sobic001G290500--Sobic006G275500 Sobic001G054700 Sobic001G054700 Sobic001G290500--Sobic001G054700 Sobic001G296100 Sobic001G296100 Sobic001G290500--Sobic001G296100 Sobic001G290500--Sobic009G188900 Sobic009G000600 Sobic009G000600 Sobic001G290500--Sobic009G000600 Sobic006G016700 Sobic006G016700 Sobic006G275500--Sobic006G016700 Sobic001G104500 Sobic001G104500 Sobic006G275500--Sobic001G104500 Sobic002G168000 Sobic002G168000 Sobic006G275500--Sobic002G168000 Sobic003G147500 Sobic003G147500 Sobic006G275500--Sobic003G147500 Sobic007G187700 Sobic007G187700 Sobic006G275500--Sobic007G187700 Sobic008G090000 Sobic008G090000 Sobic006G275500--Sobic008G090000 Sobic006G275500--Sobic009G077300 Sobic006G275500--Sobic006G094100 Sobic009G146250 Sobic009G146250 Sobic006G275500--Sobic009G146250 Sobic007G125300 Sobic007G125300 Sobic001G140700--Sobic007G125300 Sobic004G069400 Sobic004G069400 Sobic001G140700--Sobic004G069400 Sobic001G140700--Sobic006G094100 Sobic002G236700 Sobic002G236700 Sobic001G140700--Sobic002G236700 Sobic003G212600 Sobic003G212600 Sobic001G140700--Sobic003G212600 Sobic001G268300 Sobic001G268300 Sobic001G140700--Sobic001G268300 Sobic006G120600 Sobic006G120600 Sobic001G140700--Sobic006G120600 Sobic009G087300 Sobic009G087300 Sobic001G140700--Sobic009G087300 Sobic001G140700--Sobic010G250400 Sobic007G112100 Sobic007G112100 Sobic009G109300--Sobic007G112100 Sobic006G051000 Sobic006G051000 Sobic009G109300--Sobic006G051000 Sobic010G103700 Sobic010G103700 Sobic009G109300--Sobic010G103700 Sobic006G195500 Sobic006G195500 Sobic009G109300--Sobic006G195500 Sobic001G238900 Sobic001G238900 Sobic009G109300--Sobic001G238900 Sobic009G109300--Sobic002G230800 Sobic003G183700 Sobic003G183700 Sobic009G109300--Sobic003G183700 Sobic003G179500 Sobic003G179500 Sobic009G109300--Sobic003G179500 Sobic002G246900 Sobic002G246900 Sobic009G109300--Sobic002G246900 Sobic007G043400 Sobic007G043400 Sobic004G330600--Sobic007G043400 Sobic004G330600--Sobic008G090000 Sobic004G330600--Sobic006G275500 Sobic004G330600--Sobic006G094100 Sobic004G330600--Sobic009G188900 Sobic004G330600--Sobic001G290500 Sobic009G045300 Sobic009G045300 Sobic004G330600--Sobic009G045300 Sobic002G133000 Sobic002G133000 Sobic004G330600--Sobic002G133000 Sobic004G330600--Sobic006G281900 Sobic009G188900--Sobic002G168000 Sobic009G188900--Sobic010G250400 Sobic009G188900--Sobic006G281900 Sobic001G199500 Sobic001G199500 Sobic009G188900--Sobic001G199500 Sobic009G188900--Sobic006G275500 Sobic001G425700 Sobic001G425700 Sobic009G188900--Sobic001G425700 Sobic009G188900--Sobic001G290500 Sobic005G153000 Sobic005G153000 Sobic009G188900--Sobic005G153000 Sobic009G188900--Sobic007G187700 Sobic002G230800--Sobic001G238900 Sobic010G105400 Sobic010G105400 Sobic002G230800--Sobic010G105400 Sobic006G124400 Sobic006G124400 Sobic002G230800--Sobic006G124400 Sobic002G230800--Sobic001G054700 Sobic002G230800--Sobic003G179500 Sobic002G230800--Sobic009G109300 Sobic007G218100 Sobic007G218100 Sobic002G230800--Sobic007G218100 Sobic002G230800--Sobic002G246900 Sobic003G244000 Sobic003G244000 Sobic002G230800--Sobic003G244000 Sobic010G250400--Sobic009G188900 Sobic010G250400--Sobic005G153000 Sobic002G021200 Sobic002G021200 Sobic010G250400--Sobic002G021200 Sobic010G250400--Sobic003G147500 Sobic010G250400--Sobic002G168000 Sobic009G207400 Sobic009G207400 Sobic010G250400--Sobic009G207400 Sobic010G250400--Sobic007G187700 Sobic010G250400--Sobic001G054700 Sobic001G532800 Sobic001G532800 Sobic010G250400--Sobic001G532800 Sobic006G196600--Sobic006G051000 Sobic006G196600--Sobic003G183700 Sobic006G196600--Sobic006G195500 Sobic004G317000 Sobic004G317000 Sobic006G196600--Sobic004G317000 Sobic001G377700 Sobic001G377700 Sobic006G196600--Sobic001G377700 Sobic006G196600--Sobic007G187700 Sobic006G196600--Sobic006G275500 Sobic005G157300 Sobic005G157300 Sobic006G196600--Sobic005G157300 Sobic006G196600--Sobic010G103700
Octagon: transcription factors


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