Gene annotation
Transcriptome id Sobic.001G140700.2,Sobic.001G140700.1
Synonym PKP-ALPHA, PKP1, Sb01g012240
Functional annotation pyruvate kinase, putative, expressed
UniProt C5WPQ9 , A0A1Z5S5K7
Pfam PF02887 PF00224
Panther DB PTHR11817 PTHR11817:SF21
NCBI CDD KOG2323; Pyruvate kinase
KEGG Orthology K00873; PK, pyruvate kinase
Gene Ontology GO:0006096; glycolytic process GO:0004743pyruvate kinase activity GO:0000287magnesium ion binding


Orthologs (automatic annotation)
TAIR AT3G22960 : Pyruvate kinase family protein
RAP-DB (Rice) LOC_Os03g46910.1 : pyruvate kinase, putative, expressed
MaizeGDB (Corn) Zm00025a004283 , Zm00025a007494
Brachypodium KQK13831 , PNT74334 , PNT74333 , PNT74332
Barley HORVU4Hr1G003290.9 , HORVU4Hr1G003290.2 , HORVU4Hr1G003290.3 , HORVU4Hr1G003290.1 , HORVU4Hr1G003290.6 , HORVU4Hr1G003290.7 , HORVU4Hr1G003290.4 , HORVU4Hr1G003290.5
Wheat TraesCS4B02G021300 , TraesCS4D02G018900
Populus -


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cDNA sequences
Sobic.001G140700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G125300 BRCA1 C Terminus domain containing protein, expressed -
2 Sobic.004G069400 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
3 Sobic.006G094100 expressed protein -
4 Sobic.002G236700 TMV-MP30 binding protein 2C, putative, expressed -
5 Sobic.003G212600 ubiquitin-conjugating enzyme, putative, expressed K13960: UBE2T, ubiquitin-conjugating enzyme E2 T
6 Sobic.001G268300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@queuine tRNA-ribosyltransferase, putative, expressed K15407: queuine tRNA-ribosyltransferase subunit QTRTD1
7 Sobic.006G120600 AAA-type ATPase family protein, putative, expressed -
8 Sobic.009G087300 mitotic checkpoint family protein, putative, expressed -
9 Sobic.010G250400 OsSub52 - Putative Subtilisin homologue, expressed -
10 Sobic.007G112100 enoyl-acyl-carrier-protein reductase NADH, chloroplast precursor, expressed K00208: enoyl-[acyl-carrier protein] reductase I
11 Sobic.001G532800 RNA recognition motif containing protein, putative, expressed K12893: splicing factor, arginine/serine-rich 4/5/6
12 Sobic.001G296800 WD repeat-containing protein 8, putative, expressed -
13 Sobic.006G119300 ribonuclease H2 subunit B, putative, expressed K10744: ribonuclease H2 subunit B
14 Sobic.002G362200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MSH-like DNA mismatch repair protein, putative, expressed K08735: DNA mismatch repair protein MSH2
15 Sobic.002G246900 expressed protein -
16 Sobic.002G268700 hydroxymethylglutaryl-CoA synthase, putative, expressed K01641: hydroxymethylglutaryl-CoA synthase
17 Sobic.010G105400 chromosome condensation protein like, putative, expressed K06678: YCG1, condensin complex subunit 3
18 Sobic.007G173000 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
19 Sobic.010G191000 expressed protein -
20 Sobic.003G147500 PHS1, putative, expressed K14165: atypical dual specificity phosphatase


Gene co-expression network
sample Sobic001G140700 Sobic001G140700 Sobic007G125300 Sobic007G125300 Sobic001G140700--Sobic007G125300 Sobic004G069400 Sobic004G069400 Sobic001G140700--Sobic004G069400 Sobic006G094100 Sobic006G094100 Sobic001G140700--Sobic006G094100 Sobic002G236700 Sobic002G236700 Sobic001G140700--Sobic002G236700 Sobic003G212600 Sobic003G212600 Sobic001G140700--Sobic003G212600 Sobic001G268300 Sobic001G268300 Sobic001G140700--Sobic001G268300 Sobic006G120600 Sobic006G120600 Sobic001G140700--Sobic006G120600 Sobic009G087300 Sobic009G087300 Sobic001G140700--Sobic009G087300 Sobic010G250400 Sobic010G250400 Sobic001G140700--Sobic010G250400 Sobic002G290000 Sobic002G290000 Sobic007G125300--Sobic002G290000 Sobic005G110535 Sobic005G110535 Sobic007G125300--Sobic005G110535 Sobic008G148000 Sobic008G148000 Sobic007G125300--Sobic008G148000 Sobic004G053900 Sobic004G053900 Sobic007G125300--Sobic004G053900 Sobic001G109700 Sobic001G109700 Sobic007G125300--Sobic001G109700 Sobic001G377700 Sobic001G377700 Sobic007G125300--Sobic001G377700 Sobic002G204400 Sobic002G204400 Sobic007G125300--Sobic002G204400 Sobic003G118100 Sobic003G118100 Sobic007G125300--Sobic003G118100 Sobic002G113400 Sobic002G113400 Sobic007G125300--Sobic002G113400 Sobic001G286100 Sobic001G286100 Sobic004G069400--Sobic001G286100 Sobic004G069400--Sobic001G140700 Sobic002G268700 Sobic002G268700 Sobic004G069400--Sobic002G268700 Sobic001G413100 Sobic001G413100 Sobic004G069400--Sobic001G413100 Sobic002G232400 Sobic002G232400 Sobic004G069400--Sobic002G232400 Sobic002G304400 Sobic002G304400 Sobic004G069400--Sobic002G304400 Sobic009G220000 Sobic009G220000 Sobic004G069400--Sobic009G220000 Sobic006G119300 Sobic006G119300 Sobic004G069400--Sobic006G119300 Sobic009G244900 Sobic009G244900 Sobic004G069400--Sobic009G244900 Sobic001G290500 Sobic001G290500 Sobic006G094100--Sobic001G290500 Sobic006G275500 Sobic006G275500 Sobic006G094100--Sobic006G275500 Sobic006G094100--Sobic001G140700 Sobic009G109300 Sobic009G109300 Sobic006G094100--Sobic009G109300 Sobic004G330600 Sobic004G330600 Sobic006G094100--Sobic004G330600 Sobic009G188900 Sobic009G188900 Sobic006G094100--Sobic009G188900 Sobic002G230800 Sobic002G230800 Sobic006G094100--Sobic002G230800 Sobic006G094100--Sobic010G250400 Sobic006G196600 Sobic006G196600 Sobic006G094100--Sobic006G196600 Sobic002G246900 Sobic002G246900 Sobic002G236700--Sobic002G246900 Sobic002G236700--Sobic001G140700 Sobic001G532800 Sobic001G532800 Sobic002G236700--Sobic001G532800 Sobic003G107200 Sobic003G107200 Sobic002G236700--Sobic003G107200 Sobic002G236700--Sobic009G109300 Sobic007G112100 Sobic007G112100 Sobic002G236700--Sobic007G112100 Sobic002G315400 Sobic002G315400 Sobic002G236700--Sobic002G315400 Sobic007G218100 Sobic007G218100 Sobic002G236700--Sobic007G218100 Sobic010G191000 Sobic010G191000 Sobic002G236700--Sobic010G191000 Sobic001G054700 Sobic001G054700 Sobic003G212600--Sobic001G054700 Sobic007G076200 Sobic007G076200 Sobic003G212600--Sobic007G076200 Sobic003G212600--Sobic002G204400 Sobic003G212600--Sobic001G140700 Sobic003G212600--Sobic009G087300 Sobic010G105400 Sobic010G105400 Sobic003G212600--Sobic010G105400 Sobic001G231200 Sobic001G231200 Sobic003G212600--Sobic001G231200 Sobic002G021200 Sobic002G021200 Sobic003G212600--Sobic002G021200 Sobic001G296800 Sobic001G296800 Sobic003G212600--Sobic001G296800 Sobic009G041800 Sobic009G041800 Sobic001G268300--Sobic009G041800 Sobic008G179000 Sobic008G179000 Sobic001G268300--Sobic008G179000 Sobic006G262800 Sobic006G262800 Sobic001G268300--Sobic006G262800 Sobic002G362200 Sobic002G362200 Sobic001G268300--Sobic002G362200 Sobic008G031200 Sobic008G031200 Sobic001G268300--Sobic008G031200 Sobic003G142400 Sobic003G142400 Sobic001G268300--Sobic003G142400 Sobic010G252200 Sobic010G252200 Sobic001G268300--Sobic010G252200 Sobic004G282500 Sobic004G282500 Sobic001G268300--Sobic004G282500 Sobic005G078700 Sobic005G078700 Sobic001G268300--Sobic005G078700 Sobic010G103700 Sobic010G103700 Sobic006G120600--Sobic010G103700 Sobic003G183700 Sobic003G183700 Sobic006G120600--Sobic003G183700 Sobic006G195500 Sobic006G195500 Sobic006G120600--Sobic006G195500 Sobic006G120600--Sobic002G290000 Sobic002G303800 Sobic002G303800 Sobic006G120600--Sobic002G303800 Sobic003G179500 Sobic003G179500 Sobic006G120600--Sobic003G179500 Sobic006G120600--Sobic007G125300 Sobic009G087000 Sobic009G087000 Sobic006G120600--Sobic009G087000 Sobic006G051000 Sobic006G051000 Sobic006G120600--Sobic006G051000 Sobic009G087300--Sobic002G204400 Sobic009G087300--Sobic010G105400 Sobic005G144600 Sobic005G144600 Sobic009G087300--Sobic005G144600 Sobic009G087300--Sobic002G303800 Sobic003G201000 Sobic003G201000 Sobic009G087300--Sobic003G201000 Sobic001G122100 Sobic001G122100 Sobic009G087300--Sobic001G122100 Sobic003G444300 Sobic003G444300 Sobic009G087300--Sobic003G444300 Sobic006G281400 Sobic006G281400 Sobic009G087300--Sobic006G281400 Sobic005G000500 Sobic005G000500 Sobic009G087300--Sobic005G000500 Sobic010G250400--Sobic009G188900 Sobic005G153000 Sobic005G153000 Sobic010G250400--Sobic005G153000 Sobic010G250400--Sobic002G021200 Sobic003G147500 Sobic003G147500 Sobic010G250400--Sobic003G147500 Sobic002G168000 Sobic002G168000 Sobic010G250400--Sobic002G168000 Sobic009G207400 Sobic009G207400 Sobic010G250400--Sobic009G207400 Sobic007G187700 Sobic007G187700 Sobic010G250400--Sobic007G187700 Sobic010G250400--Sobic001G054700 Sobic010G250400--Sobic001G532800
Octagon: transcription factors


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