Gene annotation
Transcriptome id Sobic.001G296800.2
Synonym Sb01g028970
Functional annotation WD repeat-containing protein 8, putative, expressed
UniProt A0A1Z5S879
Pfam -
Panther DB PTHR16220 PTHR16220:SF0
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G07590 : Transducin/WD40 repeat-like superfamily protein
RAP-DB (Rice) LOC_Os10g41370.1 : WD repeat-containing protein 8, putative, expressed
MaizeGDB (Corn) Zm00025a048493
Brachypodium KQJ97822
Barley HORVU1Hr1G055570.1 , HORVU1Hr1G055570.3 , HORVU1Hr1G055570.2 , HORVU1Hr1G055570.5 , HORVU1Hr1G055570.4
Wheat TraesCS1B02G231200 , TraesCS1B02G231200 , TraesCS1A02G217800
Populus -


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cDNA sequences
Sobic.001G296800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G212100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
2 Sobic.004G315700 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
3 Sobic.010G103500 ATMAP70 protein, putative, expressed -
4 Sobic.001G487200 zinc finger, C3HC4 type domain containing protein, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
5 Sobic.004G129500 expressed protein -
6 Sobic.001G361200 expressed protein -
7 Sobic.002G370400 expressed protein -
8 Sobic.001G212600 a_IG002N01.7, putative, expressed -
9 Sobic.009G052100 tubulin/FtsZ domain containing protein, putative, expressed K10389: tubulin gamma
10 Sobic.003G409600 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
11 Sobic.001G507200 PIR, putative, expressed K05749: cytoplasmic FMR1 interacting protein
12 Sobic.004G015300 expressed protein K16587: HAUS augmin-like complex subunit 4
13 Sobic.006G071628 - -
14 Sobic.001G231200 expressed protein -
15 Sobic.006G267500 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
16 Sobic.003G411700 heat shock protein DnaJ, putative, expressed -
17 Sobic.003G212600 ubiquitin-conjugating enzyme, putative, expressed K13960: UBE2T, ubiquitin-conjugating enzyme E2 T
18 Sobic.004G306100 expressed protein -
19 Sobic.001G140700 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
20 Sobic.007G031300 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -


Gene co-expression network
sample Sobic001G296800 Sobic001G296800 Sobic009G212100 Sobic009G212100 Sobic001G296800--Sobic009G212100 Sobic004G315700 Sobic004G315700 Sobic001G296800--Sobic004G315700 Sobic010G103500 Sobic010G103500 Sobic001G296800--Sobic010G103500 Sobic001G487200 Sobic001G487200 Sobic001G296800--Sobic001G487200 Sobic004G129500 Sobic004G129500 Sobic001G296800--Sobic004G129500 Sobic001G361200 Sobic001G361200 Sobic001G296800--Sobic001G361200 Sobic002G370400 Sobic002G370400 Sobic001G296800--Sobic002G370400 Sobic001G212600 Sobic001G212600 Sobic001G296800--Sobic001G212600 Sobic009G052100 Sobic009G052100 Sobic001G296800--Sobic009G052100 Sobic009G212100--Sobic001G487200 Sobic009G212100--Sobic004G315700 Sobic009G212100--Sobic001G296800 Sobic003G226700 Sobic003G226700 Sobic009G212100--Sobic003G226700 Sobic007G084200 Sobic007G084200 Sobic009G212100--Sobic007G084200 Sobic006G267500 Sobic006G267500 Sobic009G212100--Sobic006G267500 Sobic006G084300 Sobic006G084300 Sobic009G212100--Sobic006G084300 Sobic001G369800 Sobic001G369800 Sobic009G212100--Sobic001G369800 Sobic006G254500 Sobic006G254500 Sobic009G212100--Sobic006G254500 Sobic004G315700--Sobic001G487200 Sobic004G315700--Sobic009G212100 Sobic004G315700--Sobic001G296800 Sobic004G315700--Sobic009G052100 Sobic004G315700--Sobic006G084300 Sobic003G420300 Sobic003G420300 Sobic004G315700--Sobic003G420300 Sobic006G218900 Sobic006G218900 Sobic004G315700--Sobic006G218900 Sobic003G345000 Sobic003G345000 Sobic004G315700--Sobic003G345000 Sobic001G540700 Sobic001G540700 Sobic004G315700--Sobic001G540700 Sobic002G260700 Sobic002G260700 Sobic010G103500--Sobic002G260700 Sobic004G306100 Sobic004G306100 Sobic010G103500--Sobic004G306100 Sobic003G411700 Sobic003G411700 Sobic010G103500--Sobic003G411700 Sobic010G103500--Sobic004G129500 Sobic007G036800 Sobic007G036800 Sobic010G103500--Sobic007G036800 Sobic010G103500--Sobic001G296800 Sobic010G103500--Sobic004G315700 Sobic002G271400 Sobic002G271400 Sobic010G103500--Sobic002G271400 Sobic010G052400 Sobic010G052400 Sobic010G103500--Sobic010G052400 Sobic001G487200--Sobic004G315700 Sobic001G487200--Sobic009G212100 Sobic001G487200--Sobic001G369800 Sobic001G231200 Sobic001G231200 Sobic001G487200--Sobic001G231200 Sobic001G487200--Sobic002G370400 Sobic001G487200--Sobic003G226700 Sobic001G487200--Sobic001G540700 Sobic001G487200--Sobic001G296800 Sobic001G487200--Sobic007G084200 Sobic004G129500--Sobic007G036800 Sobic004G129500--Sobic010G103500 Sobic004G129500--Sobic001G296800 Sobic003G028400 Sobic003G028400 Sobic004G129500--Sobic003G028400 Sobic004G129500--Sobic003G411700 Sobic002G426100 Sobic002G426100 Sobic004G129500--Sobic002G426100 Sobic002G123600 Sobic002G123600 Sobic004G129500--Sobic002G123600 Sobic002G043000 Sobic002G043000 Sobic004G129500--Sobic002G043000 Sobic004G129500--Sobic001G361200 Sobic002G192900 Sobic002G192900 Sobic001G361200--Sobic002G192900 Sobic001G154300 Sobic001G154300 Sobic001G361200--Sobic001G154300 Sobic003G184300 Sobic003G184300 Sobic001G361200--Sobic003G184300 Sobic004G328300 Sobic004G328300 Sobic001G361200--Sobic004G328300 Sobic001G361200--Sobic001G296800 Sobic003G315700 Sobic003G315700 Sobic001G361200--Sobic003G315700 Sobic006G095000 Sobic006G095000 Sobic001G361200--Sobic006G095000 Sobic001G361200--Sobic003G411700 Sobic001G361200--Sobic004G306100 Sobic002G370400--Sobic001G487200 Sobic002G370400--Sobic001G231200 Sobic002G370400--Sobic004G315700 Sobic006G272500 Sobic006G272500 Sobic002G370400--Sobic006G272500 Sobic002G370400--Sobic009G212100 Sobic002G370400--Sobic001G296800 Sobic009G124800 Sobic009G124800 Sobic002G370400--Sobic009G124800 Sobic003G153900 Sobic003G153900 Sobic002G370400--Sobic003G153900 Sobic010G211800 Sobic010G211800 Sobic002G370400--Sobic010G211800 Sobic003G351900 Sobic003G351900 Sobic001G212600--Sobic003G351900 Sobic001G212600--Sobic003G411700 Sobic008G165200 Sobic008G165200 Sobic001G212600--Sobic008G165200 Sobic001G212600--Sobic001G369800 Sobic001G212600--Sobic001G296800 Sobic010G222800 Sobic010G222800 Sobic001G212600--Sobic010G222800 Sobic001G212600--Sobic001G487200 Sobic005G062600 Sobic005G062600 Sobic001G212600--Sobic005G062600 Sobic002G006100 Sobic002G006100 Sobic001G212600--Sobic002G006100 Sobic009G052100--Sobic004G315700 Sobic004G156200 Sobic004G156200 Sobic009G052100--Sobic004G156200 Sobic001G507200 Sobic001G507200 Sobic009G052100--Sobic001G507200 Sobic009G049200 Sobic009G049200 Sobic009G052100--Sobic009G049200 Sobic006G071628 Sobic006G071628 Sobic009G052100--Sobic006G071628 Sobic010G250800 Sobic010G250800 Sobic009G052100--Sobic010G250800 Sobic009G052100--Sobic003G315700 Sobic010G252700 Sobic010G252700 Sobic009G052100--Sobic010G252700 Sobic009G052100--Sobic003G420300
Octagon: transcription factors


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