Gene annotation
Transcriptome id Sobic.001G361200.1
Synonym Sb01g034510
Functional annotation expressed protein
UniProt C5WYR3
Pfam -
Panther DB PTHR31469 PTHR31469:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G41150 : -
RAP-DB (Rice) LOC_Os03g25110.1 : expressed protein
MaizeGDB (Corn) Zm00025a002612 , Zm00025a015269
Brachypodium PNT77360 , KQK14976 , KQK21570 , KQK21571 , KQK21572 , KQK21573 , PNT77359
Barley HORVU2Hr1G026040.14 , HORVU2Hr1G026040.15 , HORVU2Hr1G026040.12 , HORVU2Hr1G026040.10 , HORVU2Hr1G026040.1 , HORVU2Hr1G026040.3 , HORVU2Hr1G026040.8
Wheat TraesCS2B02G171800 , TraesCS2A02G146500 , TraesCS2D02G151100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G192900 expressed protein -
2 Sobic.001G154300 DNA binding protein, putative, expressed -
3 Sobic.003G184300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.004G328300 expressed protein -
5 Sobic.001G296800 WD repeat-containing protein 8, putative, expressed -
6 Sobic.003G315700 AAA-type ATPase family protein, putative, expressed -
7 Sobic.006G095000 PPR repeat domain containing protein, putative, expressed -
8 Sobic.003G411700 heat shock protein DnaJ, putative, expressed -
9 Sobic.004G306100 expressed protein -
10 Sobic.004G129500 expressed protein -
11 Sobic.009G052100 tubulin/FtsZ domain containing protein, putative, expressed K10389: tubulin gamma
12 Sobic.002G370400 expressed protein -
13 Sobic.010G103500 ATMAP70 protein, putative, expressed -
14 Sobic.008G084401 - -
15 Sobic.001G242300 expressed protein -
16 Sobic.004G109750 - -
17 Sobic.006G267500 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
18 Sobic.003G045000 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
19 Sobic.001G381500 lung seven transmembrane domain containing protein, putative, expressed -
20 Sobic.001G211500 LIG1 - Putative DNA ligase I, expressed K10747: DNA ligase 1


Gene co-expression network
sample Sobic001G361200 Sobic001G361200 Sobic002G192900 Sobic002G192900 Sobic001G361200--Sobic002G192900 Sobic001G154300 Sobic001G154300 Sobic001G361200--Sobic001G154300 Sobic003G184300 Sobic003G184300 Sobic001G361200--Sobic003G184300 Sobic004G328300 Sobic004G328300 Sobic001G361200--Sobic004G328300 Sobic001G296800 Sobic001G296800 Sobic001G361200--Sobic001G296800 Sobic003G315700 Sobic003G315700 Sobic001G361200--Sobic003G315700 Sobic006G095000 Sobic006G095000 Sobic001G361200--Sobic006G095000 Sobic003G411700 Sobic003G411700 Sobic001G361200--Sobic003G411700 Sobic004G306100 Sobic004G306100 Sobic001G361200--Sobic004G306100 Sobic002G308000 Sobic002G308000 Sobic002G192900--Sobic002G308000 Sobic010G188900 Sobic010G188900 Sobic002G192900--Sobic010G188900 Sobic002G192900--Sobic006G095000 Sobic002G192900--Sobic001G361200 Sobic002G390800 Sobic002G390800 Sobic002G192900--Sobic002G390800 Sobic002G192900--Sobic003G184300 Sobic004G064600 Sobic004G064600 Sobic002G192900--Sobic004G064600 Sobic001G323400 Sobic001G323400 Sobic002G192900--Sobic001G323400 Sobic001G248400 Sobic001G248400 Sobic002G192900--Sobic001G248400 Sobic001G381500 Sobic001G381500 Sobic001G154300--Sobic001G381500 Sobic001G154300--Sobic004G328300 Sobic001G154300--Sobic001G361200 Sobic001G023500 Sobic001G023500 Sobic001G154300--Sobic001G023500 Sobic001G154300--Sobic002G192900 Sobic001G154300--Sobic004G306100 Sobic001G154300--Sobic001G248400 Sobic001G154300--Sobic002G308000 Sobic006G127200 Sobic006G127200 Sobic001G154300--Sobic006G127200 Sobic004G256900 Sobic004G256900 Sobic003G184300--Sobic004G256900 Sobic003G184300--Sobic006G095000 Sobic003G184300--Sobic002G192900 Sobic003G184300--Sobic001G361200 Sobic001G478900 Sobic001G478900 Sobic003G184300--Sobic001G478900 Sobic010G068900 Sobic010G068900 Sobic003G184300--Sobic010G068900 Sobic002G172500 Sobic002G172500 Sobic003G184300--Sobic002G172500 Sobic003G184300--Sobic010G188900 Sobic003G184300--Sobic004G064600 Sobic005G055600 Sobic005G055600 Sobic004G328300--Sobic005G055600 Sobic006G193100 Sobic006G193100 Sobic004G328300--Sobic006G193100 Sobic004G328300--Sobic003G315700 Sobic004G053900 Sobic004G053900 Sobic004G328300--Sobic004G053900 Sobic001G025900 Sobic001G025900 Sobic004G328300--Sobic001G025900 Sobic004G328300--Sobic001G023500 Sobic004G328300--Sobic001G154300 Sobic009G202801 Sobic009G202801 Sobic004G328300--Sobic009G202801 Sobic002G113400 Sobic002G113400 Sobic004G328300--Sobic002G113400 Sobic009G212100 Sobic009G212100 Sobic001G296800--Sobic009G212100 Sobic004G315700 Sobic004G315700 Sobic001G296800--Sobic004G315700 Sobic010G103500 Sobic010G103500 Sobic001G296800--Sobic010G103500 Sobic001G487200 Sobic001G487200 Sobic001G296800--Sobic001G487200 Sobic004G129500 Sobic004G129500 Sobic001G296800--Sobic004G129500 Sobic001G296800--Sobic001G361200 Sobic002G370400 Sobic002G370400 Sobic001G296800--Sobic002G370400 Sobic001G212600 Sobic001G212600 Sobic001G296800--Sobic001G212600 Sobic009G052100 Sobic009G052100 Sobic001G296800--Sobic009G052100 Sobic008G148000 Sobic008G148000 Sobic003G315700--Sobic008G148000 Sobic003G315700--Sobic006G193100 Sobic003G315700--Sobic004G306100 Sobic002G290000 Sobic002G290000 Sobic003G315700--Sobic002G290000 Sobic003G315700--Sobic009G202801 Sobic003G315700--Sobic004G328300 Sobic003G409600 Sobic003G409600 Sobic003G315700--Sobic003G409600 Sobic003G315700--Sobic002G113400 Sobic003G315700--Sobic009G052100 Sobic006G095000--Sobic003G184300 Sobic006G095000--Sobic002G192900 Sobic006G095000--Sobic004G064600 Sobic008G047500 Sobic008G047500 Sobic006G095000--Sobic008G047500 Sobic004G215600 Sobic004G215600 Sobic006G095000--Sobic004G215600 Sobic006G095000--Sobic001G323400 Sobic006G095000--Sobic002G308000 Sobic003G045000 Sobic003G045000 Sobic006G095000--Sobic003G045000 Sobic009G120400 Sobic009G120400 Sobic006G095000--Sobic009G120400 Sobic010G222800 Sobic010G222800 Sobic003G411700--Sobic010G222800 Sobic003G411700--Sobic004G306100 Sobic002G271400 Sobic002G271400 Sobic003G411700--Sobic002G271400 Sobic003G411700--Sobic010G103500 Sobic001G425200 Sobic001G425200 Sobic003G411700--Sobic001G425200 Sobic003G343200 Sobic003G343200 Sobic003G411700--Sobic003G343200 Sobic003G411700--Sobic001G212600 Sobic010G024000 Sobic010G024000 Sobic003G411700--Sobic010G024000 Sobic005G160200 Sobic005G160200 Sobic003G411700--Sobic005G160200 Sobic004G306100--Sobic002G271400 Sobic004G306100--Sobic010G103500 Sobic004G306100--Sobic003G411700 Sobic004G306100--Sobic003G315700 Sobic004G306100--Sobic006G127200 Sobic004G306100--Sobic003G409600 Sobic002G260700 Sobic002G260700 Sobic004G306100--Sobic002G260700 Sobic002G123600 Sobic002G123600 Sobic004G306100--Sobic002G123600 Sobic010G052400 Sobic010G052400 Sobic004G306100--Sobic010G052400
Octagon: transcription factors


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