Gene annotation
Transcriptome id Sobic.003G045000.1
Synonym Sb03g003950
Functional annotation serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed
UniProt C5XMS1
Pfam PF01603
Panther DB PTHR10257 PTHR10257:SF23
NCBI CDD -
KEGG Orthology K11584; serine/threonine-protein phosphatase 2A regulatory subunit B'
Gene Ontology GO:0007165; signal transduction GO:0000159protein phosphatase type 2A complex


Orthologs (automatic annotation)
TAIR AT5G25510 : Protein phosphatase 2A regulatory B subunit family protein
RAP-DB (Rice) LOC_Os05g08560.1 : transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a043036 , Zm00025a023197
Brachypodium KQK07230 , KQK02998
Barley HORVU1Hr1G025690.11 , HORVU1Hr1G025690.10 , HORVU1Hr1G025690.9 , HORVU1Hr1G025690.8 , HORVU1Hr1G025690.3 , HORVU1Hr1G025690.2 , HORVU1Hr1G025690.1 , HORVU1Hr1G025690.7 , HORVU1Hr1G025690.6 , HORVU1Hr1G025690.5 , HORVU1Hr1G025690.4 , HORVU3Hr1G022550.2 , HORVU3Hr1G022550.1
Wheat TraesCS3B02G140800 , TraesCS1B02G138000 , TraesCS1D02G119400 , TraesCS3D02G123500 , TraesCS3A02G121400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G085950 - -
2 Sobic.008G047500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.010G188900 PPR repeat domain containing protein, putative, expressed -
4 Sobic.002G308000 powdery mildew resistant protein 5, putative, expressed -
5 Sobic.007G043700 oxysterol-binding protein-related protein 6, putative, expressed -
6 Sobic.003G194800 EF hand family protein, putative, expressed -
7 Sobic.007G105700 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
8 Sobic.002G390800 kinesin motor domain containing protein, putative, expressed K10400: kinesin family member 15
9 Sobic.009G120400 methyltransferase, putative, expressed -
10 Sobic.002G173400 expressed protein -
11 Sobic.006G095000 PPR repeat domain containing protein, putative, expressed -
12 Sobic.001G433600 - -
13 Sobic.007G189100 SFC, putative, expressed K12489: Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
14 Sobic.002G192900 expressed protein -
15 Sobic.008G073500 AAA-type ATPase family protein, putative, expressed -
16 Sobic.004G215600 - K15271: HFM1, ATP-dependent DNA helicase HFM1/MER3
17 Sobic.005G060100 growth regulator related protein, putative, expressed -
18 Sobic.002G322700 expressed protein -
19 Sobic.002G052800 FAR1 family protein, expressed -
20 Sobic.006G167100 - -


Gene co-expression network
sample Sobic003G045000 Sobic003G045000 Sobic008G085950 Sobic008G085950 Sobic003G045000--Sobic008G085950 Sobic008G047500 Sobic008G047500 Sobic003G045000--Sobic008G047500 Sobic010G188900 Sobic010G188900 Sobic003G045000--Sobic010G188900 Sobic002G308000 Sobic002G308000 Sobic003G045000--Sobic002G308000 Sobic007G043700 Sobic007G043700 Sobic003G045000--Sobic007G043700 Sobic003G194800 Sobic003G194800 Sobic003G045000--Sobic003G194800 Sobic007G105700 Sobic007G105700 Sobic003G045000--Sobic007G105700 Sobic002G390800 Sobic002G390800 Sobic003G045000--Sobic002G390800 Sobic009G120400 Sobic009G120400 Sobic003G045000--Sobic009G120400 Sobic001G308500 Sobic001G308500 Sobic008G085950--Sobic001G308500 Sobic008G085950--Sobic007G043700 Sobic007G102000 Sobic007G102000 Sobic008G085950--Sobic007G102000 Sobic008G085950--Sobic007G105700 Sobic008G085950--Sobic003G194800 Sobic008G085950--Sobic008G047500 Sobic001G385300 Sobic001G385300 Sobic008G085950--Sobic001G385300 Sobic001G327100 Sobic001G327100 Sobic008G085950--Sobic001G327100 Sobic005G060100 Sobic005G060100 Sobic008G085950--Sobic005G060100 Sobic008G047500--Sobic008G085950 Sobic003G204100 Sobic003G204100 Sobic008G047500--Sobic003G204100 Sobic008G047500--Sobic003G194800 Sobic008G047500--Sobic007G102000 Sobic008G047500--Sobic002G390800 Sobic002G173400 Sobic002G173400 Sobic008G047500--Sobic002G173400 Sobic004G298600 Sobic004G298600 Sobic008G047500--Sobic004G298600 Sobic008G047500--Sobic007G105700 Sobic010G009700 Sobic010G009700 Sobic008G047500--Sobic010G009700 Sobic010G188900--Sobic002G308000 Sobic002G192900 Sobic002G192900 Sobic010G188900--Sobic002G192900 Sobic010G253200 Sobic010G253200 Sobic010G188900--Sobic010G253200 Sobic008G132200 Sobic008G132200 Sobic010G188900--Sobic008G132200 Sobic010G188900--Sobic003G045000 Sobic003G075200 Sobic003G075200 Sobic010G188900--Sobic003G075200 Sobic010G080900 Sobic010G080900 Sobic010G188900--Sobic010G080900 Sobic001G352800 Sobic001G352800 Sobic010G188900--Sobic001G352800 Sobic008G104000 Sobic008G104000 Sobic010G188900--Sobic008G104000 Sobic002G392400 Sobic002G392400 Sobic002G308000--Sobic002G392400 Sobic002G308000--Sobic007G105700 Sobic001G117900 Sobic001G117900 Sobic002G308000--Sobic001G117900 Sobic001G433600 Sobic001G433600 Sobic002G308000--Sobic001G433600 Sobic003G293400 Sobic003G293400 Sobic002G308000--Sobic003G293400 Sobic002G308000--Sobic010G253200 Sobic001G131900 Sobic001G131900 Sobic002G308000--Sobic001G131900 Sobic007G111300 Sobic007G111300 Sobic002G308000--Sobic007G111300 Sobic002G308000--Sobic002G192900 Sobic007G043700--Sobic008G085950 Sobic007G043700--Sobic001G308500 Sobic008G073500 Sobic008G073500 Sobic007G043700--Sobic008G073500 Sobic007G189100 Sobic007G189100 Sobic007G043700--Sobic007G189100 Sobic007G043700--Sobic007G105700 Sobic007G043700--Sobic007G102000 Sobic007G043700--Sobic010G253200 Sobic007G043700--Sobic001G385300 Sobic001G435700 Sobic001G435700 Sobic007G043700--Sobic001G435700 Sobic003G194800--Sobic008G085950 Sobic003G194800--Sobic008G047500 Sobic003G194800--Sobic009G120400 Sobic003G194800--Sobic003G204100 Sobic003G194800--Sobic002G173400 Sobic003G299500 Sobic003G299500 Sobic003G194800--Sobic003G299500 Sobic003G194800--Sobic007G105700 Sobic004G215600 Sobic004G215600 Sobic003G194800--Sobic004G215600 Sobic003G420400 Sobic003G420400 Sobic003G194800--Sobic003G420400 Sobic007G105700--Sobic002G392400 Sobic007G105700--Sobic002G308000 Sobic007G105700--Sobic005G060100 Sobic007G105700--Sobic001G433600 Sobic007G105700--Sobic001G385300 Sobic007G105700--Sobic001G308500 Sobic007G105700--Sobic004G298600 Sobic007G105700--Sobic008G085950 Sobic007G105700--Sobic001G117900 Sobic001G082800 Sobic001G082800 Sobic002G390800--Sobic001G082800 Sobic002G390800--Sobic007G102000 Sobic009G125800 Sobic009G125800 Sobic002G390800--Sobic009G125800 Sobic002G390800--Sobic008G047500 Sobic002G390800--Sobic002G192900 Sobic009G136000 Sobic009G136000 Sobic002G390800--Sobic009G136000 Sobic008G004900 Sobic008G004900 Sobic002G390800--Sobic008G004900 Sobic001G248400 Sobic001G248400 Sobic002G390800--Sobic001G248400 Sobic010G038200 Sobic010G038200 Sobic002G390800--Sobic010G038200 Sobic009G120400--Sobic002G173400 Sobic002G426100 Sobic002G426100 Sobic009G120400--Sobic002G426100 Sobic007G034200 Sobic007G034200 Sobic009G120400--Sobic007G034200 Sobic009G120400--Sobic003G194800 Sobic009G120400--Sobic004G215600 Sobic009G120400--Sobic007G105700 Sobic009G120400--Sobic003G299500 Sobic007G186400 Sobic007G186400 Sobic009G120400--Sobic007G186400 Sobic001G051400 Sobic001G051400 Sobic009G120400--Sobic001G051400
Octagon: transcription factors


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