Gene annotation
Transcriptome id Sobic.005G060100.2,Sobic.005G060100.1,Sobic.005G060100.3
Synonym Sb05g004890
Functional annotation growth regulator related protein, putative, expressed
UniProt A0A1B6PQG0 , A0A1Z5RH44 , A0A1B6PQE9
Pfam PF10250
Panther DB PTHR31288 PTHR31288:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G35510 : O-fucosyltransferase family protein
RAP-DB (Rice) LOC_Os12g07540.1,LOC_Os11g07510.1 : growth regulator related protein, putative, expressed
MaizeGDB (Corn) Zm00025a012823 , Zm00025a054051
Brachypodium KQJ89192 , KQJ92041 , KQJ89199 , KQJ89198 , PNT65372 , KQJ92043 , KQJ92042 , KQJ89200
Barley HORVU4Hr1G019000.18 , HORVU4Hr1G019000.12 , HORVU4Hr1G019000.13 , HORVU4Hr1G019000.10 , HORVU4Hr1G019000.11 , HORVU4Hr1G019000.16 , HORVU4Hr1G019000.17 , HORVU4Hr1G019000.14 , HORVU4Hr1G019000.15 , HORVU4Hr1G019000.23 , HORVU4Hr1G019000.22 , HORVU4Hr1G019000.21 , HORVU4Hr1G019000.20 , HORVU4Hr1G019000.27 , HORVU4Hr1G019000.26 , HORVU4Hr1G019000.25 , HORVU4Hr1G019000.24 , HORVU4Hr1G019000.28 , HORVU4Hr1G019000.1 , HORVU4Hr1G019000.3 , HORVU4Hr1G019000.4 , HORVU4Hr1G019000.5 , HORVU4Hr1G019000.6 , HORVU4Hr1G019000.7 , HORVU4Hr1G019000.8 , HORVU4Hr1G019000.9 , HORVU4Hr1G019000.32 , HORVU4Hr1G019000.34 , HORVU4Hr1G019000.35
Wheat TraesCS4D02G091500 , TraesCS4D02G091500 , TraesCS5A02G111900 , TraesCS4A02G216500 , TraesCS4A02G216500 , TraesCS4B02G094700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G105700 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
2 Sobic.007G102300 formin, putative, expressed -
3 Sobic.001G385300 auxin-independent growth promoter protein, putative, expressed -
4 Sobic.003G216600 BAH domain containing protein, expressed -
5 Sobic.001G433600 - -
6 Sobic.004G298600 histone-lysine N-methyltransferase, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
7 Sobic.001G117900 CAMK_KIN1/SNF1/Nim1_like.18 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07359: calcium/calmodulin-dependent protein kinase kinase 2
8 Sobic.003G352900 OsFtsH3 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein
9 Sobic.001G131900 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
10 Sobic.003G293400 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
11 Sobic.010G009700 OsFBX182 - F-box domain containing protein, expressed -
12 Sobic.008G085950 - -
13 Sobic.003G004800 ATP binding protein, putative, expressed -
14 Sobic.001G308500 glycosyltransferase family protein 1, putative, expressed -
15 Sobic.002G308000 powdery mildew resistant protein 5, putative, expressed -
16 Sobic.008G073500 AAA-type ATPase family protein, putative, expressed -
17 Sobic.009G214500 IQ calmodulin-binding motif domain containing protein, expressed -
18 Sobic.010G038200 CDT1A - Putative DNA replication initiation protein, expressed K10727: chromatin licensing and DNA replication factor 1
19 Sobic.002G392400 expressed protein -
20 Sobic.007G086600 indole-3-glycerol phosphate synthase, chloroplast precursor, putative, expressed K01609: indole-3-glycerol phosphate synthase


Gene co-expression network
sample Sobic005G060100 Sobic005G060100 Sobic007G105700 Sobic007G105700 Sobic005G060100--Sobic007G105700 Sobic007G102300 Sobic007G102300 Sobic005G060100--Sobic007G102300 Sobic001G385300 Sobic001G385300 Sobic005G060100--Sobic001G385300 Sobic003G216600 Sobic003G216600 Sobic005G060100--Sobic003G216600 Sobic001G433600 Sobic001G433600 Sobic005G060100--Sobic001G433600 Sobic004G298600 Sobic004G298600 Sobic005G060100--Sobic004G298600 Sobic001G117900 Sobic001G117900 Sobic005G060100--Sobic001G117900 Sobic003G352900 Sobic003G352900 Sobic005G060100--Sobic003G352900 Sobic001G131900 Sobic001G131900 Sobic005G060100--Sobic001G131900 Sobic002G392400 Sobic002G392400 Sobic007G105700--Sobic002G392400 Sobic002G308000 Sobic002G308000 Sobic007G105700--Sobic002G308000 Sobic007G105700--Sobic005G060100 Sobic007G105700--Sobic001G433600 Sobic007G105700--Sobic001G385300 Sobic001G308500 Sobic001G308500 Sobic007G105700--Sobic001G308500 Sobic007G105700--Sobic004G298600 Sobic008G085950 Sobic008G085950 Sobic007G105700--Sobic008G085950 Sobic007G105700--Sobic001G117900 Sobic009G214500 Sobic009G214500 Sobic007G102300--Sobic009G214500 Sobic007G102300--Sobic005G060100 Sobic007G102300--Sobic001G385300 Sobic009G220700 Sobic009G220700 Sobic007G102300--Sobic009G220700 Sobic003G217800 Sobic003G217800 Sobic007G102300--Sobic003G217800 Sobic007G102300--Sobic003G352900 Sobic007G102300--Sobic003G216600 Sobic002G299500 Sobic002G299500 Sobic007G102300--Sobic002G299500 Sobic003G005500 Sobic003G005500 Sobic007G102300--Sobic003G005500 Sobic003G376900 Sobic003G376900 Sobic001G385300--Sobic003G376900 Sobic001G385300--Sobic002G299500 Sobic001G385300--Sobic003G352900 Sobic009G163100 Sobic009G163100 Sobic001G385300--Sobic009G163100 Sobic008G171900 Sobic008G171900 Sobic001G385300--Sobic008G171900 Sobic005G045800 Sobic005G045800 Sobic001G385300--Sobic005G045800 Sobic007G141600 Sobic007G141600 Sobic001G385300--Sobic007G141600 Sobic005G020600 Sobic005G020600 Sobic001G385300--Sobic005G020600 Sobic001G385300--Sobic004G298600 Sobic003G216600--Sobic005G060100 Sobic003G216600--Sobic007G102300 Sobic010G038200 Sobic010G038200 Sobic003G216600--Sobic010G038200 Sobic010G009700 Sobic010G009700 Sobic003G216600--Sobic010G009700 Sobic003G216600--Sobic004G298600 Sobic001G248400 Sobic001G248400 Sobic003G216600--Sobic001G248400 Sobic003G216600--Sobic009G214500 Sobic010G030000 Sobic010G030000 Sobic003G216600--Sobic010G030000 Sobic008G047500 Sobic008G047500 Sobic003G216600--Sobic008G047500 Sobic001G433600--Sobic001G117900 Sobic001G433600--Sobic002G308000 Sobic001G433600--Sobic005G060100 Sobic001G433600--Sobic007G105700 Sobic009G054400 Sobic009G054400 Sobic001G433600--Sobic009G054400 Sobic001G433600--Sobic004G298600 Sobic007G189100 Sobic007G189100 Sobic001G433600--Sobic007G189100 Sobic001G433600--Sobic001G131900 Sobic007G086600 Sobic007G086600 Sobic001G433600--Sobic007G086600 Sobic004G298600--Sobic001G385300 Sobic004G298600--Sobic001G131900 Sobic003G293400 Sobic003G293400 Sobic004G298600--Sobic003G293400 Sobic004G026600 Sobic004G026600 Sobic004G298600--Sobic004G026600 Sobic004G298600--Sobic005G060100 Sobic004G298600--Sobic001G308500 Sobic004G298600--Sobic001G433600 Sobic004G298600--Sobic007G105700 Sobic004G298600--Sobic003G352900 Sobic001G117900--Sobic002G308000 Sobic001G117900--Sobic001G433600 Sobic001G117900--Sobic002G392400 Sobic001G117900--Sobic007G086600 Sobic001G117900--Sobic005G060100 Sobic001G117900--Sobic007G105700 Sobic002G348400 Sobic002G348400 Sobic001G117900--Sobic002G348400 Sobic009G025700 Sobic009G025700 Sobic001G117900--Sobic009G025700 Sobic003G004800 Sobic003G004800 Sobic001G117900--Sobic003G004800 Sobic007G144100 Sobic007G144100 Sobic003G352900--Sobic007G144100 Sobic003G352900--Sobic002G299500 Sobic001G076600 Sobic001G076600 Sobic003G352900--Sobic001G076600 Sobic003G352900--Sobic003G376900 Sobic009G201000 Sobic009G201000 Sobic003G352900--Sobic009G201000 Sobic003G352900--Sobic005G045800 Sobic003G352900--Sobic009G163100 Sobic003G352900--Sobic001G385300 Sobic008G007600 Sobic008G007600 Sobic003G352900--Sobic008G007600 Sobic001G131900--Sobic003G293400 Sobic001G131900--Sobic003G352900 Sobic004G038400 Sobic004G038400 Sobic001G131900--Sobic004G038400 Sobic001G131900--Sobic001G076600 Sobic001G131900--Sobic001G385300 Sobic001G131900--Sobic005G045800 Sobic001G131900--Sobic004G298600 Sobic002G420100 Sobic002G420100 Sobic001G131900--Sobic002G420100 Sobic001G131900--Sobic007G144100
Octagon: transcription factors


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