Gene annotation
Transcriptome id Sobic.001G131900.1
Synonym LGT1, Sb01g011560, GAUT1
Functional annotation glycosyl transferase family 8, putative, expressed
UniProt A0A1Z5S5H0
Pfam PF01501
Panther DB PTHR32116:SF26 PTHR32116
NCBI CDD -
KEGG Orthology K13648; alpha-1,4-galacturonosyltransferase
Gene Ontology GO:0016757; transferase activity, transferring glycosyl groups


Orthologs (automatic annotation)
TAIR AT3G61130 : galacturonosyltransferase 1
RAP-DB (Rice) LOC_Os06g49810.1 : glycosyl transferase family 8, putative, expressed
MaizeGDB (Corn) Zm00025a017089 , Zm00025a015612 , Zm00025a007657 , Zm00025a020056
Brachypodium KQJ91168 , KQK13741
Barley HORVU4Hr1G004440.14 , HORVU4Hr1G004440.15 , HORVU4Hr1G004440.16 , HORVU4Hr1G004440.10 , HORVU4Hr1G004440.11 , HORVU4Hr1G004440.12 , HORVU4Hr1G004440.13 , HORVU4Hr1G004440.2 , HORVU4Hr1G004440.1 , HORVU4Hr1G004440.8 , HORVU4Hr1G004440.9 , HORVU4Hr1G004440.6 , HORVU4Hr1G004440.7 , HORVU4Hr1G004440.4 , HORVU4Hr1G004440.5 , HORVU4Hr1G004440.3
Wheat TraesCS4B02G029400 , TraesCS4A02G283700 , TraesCS4A02G283700 , TraesCS4D02G026900
Populus -


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cDNA sequences
Sobic.001G131900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G293400 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
2 Sobic.003G352900 OsFtsH3 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein
3 Sobic.004G038400 fruit bromelain precursor, putative, expressed -
4 Sobic.001G076600 hydrolase, acting on carbon-nitrogen, putative, expressed -
5 Sobic.001G385300 auxin-independent growth promoter protein, putative, expressed -
6 Sobic.005G045800 serine/threonine-protein kinase WNK4, putative, expressed K08867: WNK, WNK lysine deficient protein kinase
7 Sobic.004G298600 histone-lysine N-methyltransferase, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
8 Sobic.002G420100 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
9 Sobic.007G144100 eukaryotic translation initiation factor 3 subunit C, putative, expressed K03252: translation initiation factor 3 subunit C
10 Sobic.003G376900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinesterase, putative, expressed -
11 Sobic.001G380700 bZIP transcription factor family protein, putative, expressed -
12 Sobic.002G299500 expressed protein -
13 Sobic.006G189000 ubiquitin-conjugating enzyme, putative, expressed K10577: UBE2I, ubiquitin-conjugating enzyme E2 I
14 Sobic.002G151500 R-interacting factor 1, putative, expressed -
15 Sobic.001G433600 - -
16 Sobic.010G009700 OsFBX182 - F-box domain containing protein, expressed -
17 Sobic.002G308000 powdery mildew resistant protein 5, putative, expressed -
18 Sobic.008G171900 kinesin motor domain containing protein, putative, expressed K10406: kinesin family member C2/C3
19 Sobic.005G060100 growth regulator related protein, putative, expressed -
20 Sobic.002G392400 expressed protein -


Gene co-expression network
sample Sobic001G131900 Sobic001G131900 Sobic003G293400 Sobic003G293400 Sobic001G131900--Sobic003G293400 Sobic003G352900 Sobic003G352900 Sobic001G131900--Sobic003G352900 Sobic004G038400 Sobic004G038400 Sobic001G131900--Sobic004G038400 Sobic001G076600 Sobic001G076600 Sobic001G131900--Sobic001G076600 Sobic001G385300 Sobic001G385300 Sobic001G131900--Sobic001G385300 Sobic005G045800 Sobic005G045800 Sobic001G131900--Sobic005G045800 Sobic004G298600 Sobic004G298600 Sobic001G131900--Sobic004G298600 Sobic002G420100 Sobic002G420100 Sobic001G131900--Sobic002G420100 Sobic007G144100 Sobic007G144100 Sobic001G131900--Sobic007G144100 Sobic003G293400--Sobic001G131900 Sobic003G293400--Sobic003G352900 Sobic004G198300 Sobic004G198300 Sobic003G293400--Sobic004G198300 Sobic003G293400--Sobic001G076600 Sobic003G293400--Sobic002G420100 Sobic003G293400--Sobic004G038400 Sobic004G026600 Sobic004G026600 Sobic003G293400--Sobic004G026600 Sobic003G293400--Sobic004G298600 Sobic003G293400--Sobic007G144100 Sobic003G352900--Sobic007G144100 Sobic002G299500 Sobic002G299500 Sobic003G352900--Sobic002G299500 Sobic003G352900--Sobic001G076600 Sobic003G376900 Sobic003G376900 Sobic003G352900--Sobic003G376900 Sobic009G201000 Sobic009G201000 Sobic003G352900--Sobic009G201000 Sobic003G352900--Sobic005G045800 Sobic009G163100 Sobic009G163100 Sobic003G352900--Sobic009G163100 Sobic003G352900--Sobic001G385300 Sobic008G007600 Sobic008G007600 Sobic003G352900--Sobic008G007600 Sobic005G173700 Sobic005G173700 Sobic004G038400--Sobic005G173700 Sobic009G048700 Sobic009G048700 Sobic004G038400--Sobic009G048700 Sobic004G038400--Sobic001G076600 Sobic004G168900 Sobic004G168900 Sobic004G038400--Sobic004G168900 Sobic003G005700 Sobic003G005700 Sobic004G038400--Sobic003G005700 Sobic004G038400--Sobic007G144100 Sobic002G243400 Sobic002G243400 Sobic004G038400--Sobic002G243400 Sobic008G056600 Sobic008G056600 Sobic004G038400--Sobic008G056600 Sobic009G002100 Sobic009G002100 Sobic004G038400--Sobic009G002100 Sobic001G076600--Sobic003G352900 Sobic001G076600--Sobic007G144100 Sobic008G166100 Sobic008G166100 Sobic001G076600--Sobic008G166100 Sobic001G076600--Sobic004G038400 Sobic001G076600--Sobic002G299500 Sobic004G045632 Sobic004G045632 Sobic001G076600--Sobic004G045632 Sobic003G258100 Sobic003G258100 Sobic001G076600--Sobic003G258100 Sobic001G076600--Sobic005G173700 Sobic001G076600--Sobic003G376900 Sobic001G385300--Sobic003G376900 Sobic001G385300--Sobic002G299500 Sobic001G385300--Sobic003G352900 Sobic001G385300--Sobic009G163100 Sobic008G171900 Sobic008G171900 Sobic001G385300--Sobic008G171900 Sobic001G385300--Sobic005G045800 Sobic007G141600 Sobic007G141600 Sobic001G385300--Sobic007G141600 Sobic005G020600 Sobic005G020600 Sobic001G385300--Sobic005G020600 Sobic001G385300--Sobic004G298600 Sobic005G045800--Sobic003G352900 Sobic005G045800--Sobic003G376900 Sobic005G045800--Sobic001G385300 Sobic005G045800--Sobic002G299500 Sobic005G045800--Sobic001G131900 Sobic003G200000 Sobic003G200000 Sobic005G045800--Sobic003G200000 Sobic005G045800--Sobic008G171900 Sobic005G045800--Sobic009G163100 Sobic005G045800--Sobic007G144100 Sobic004G298600--Sobic001G385300 Sobic004G298600--Sobic001G131900 Sobic004G298600--Sobic003G293400 Sobic004G298600--Sobic004G026600 Sobic005G060100 Sobic005G060100 Sobic004G298600--Sobic005G060100 Sobic001G308500 Sobic001G308500 Sobic004G298600--Sobic001G308500 Sobic001G433600 Sobic001G433600 Sobic004G298600--Sobic001G433600 Sobic007G105700 Sobic007G105700 Sobic004G298600--Sobic007G105700 Sobic004G298600--Sobic003G352900 Sobic010G253200 Sobic010G253200 Sobic002G420100--Sobic010G253200 Sobic010G182000 Sobic010G182000 Sobic002G420100--Sobic010G182000 Sobic004G241300 Sobic004G241300 Sobic002G420100--Sobic004G241300 Sobic003G423700 Sobic003G423700 Sobic002G420100--Sobic003G423700 Sobic008G156600 Sobic008G156600 Sobic002G420100--Sobic008G156600 Sobic002G420100--Sobic003G293400 Sobic002G420100--Sobic001G131900 Sobic001G400000 Sobic001G400000 Sobic002G420100--Sobic001G400000 Sobic008G104000 Sobic008G104000 Sobic002G420100--Sobic008G104000 Sobic007G144100--Sobic003G258100 Sobic007G144100--Sobic003G352900 Sobic007G144100--Sobic001G076600 Sobic003G217800 Sobic003G217800 Sobic007G144100--Sobic003G217800 Sobic010G058300 Sobic010G058300 Sobic007G144100--Sobic010G058300 Sobic001G506400 Sobic001G506400 Sobic007G144100--Sobic001G506400 Sobic007G144100--Sobic002G299500 Sobic007G144100--Sobic004G045632 Sobic007G144100--Sobic004G038400
Octagon: transcription factors


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