Gene annotation
Transcriptome id Sobic.006G189000.2,Sobic.006G189000.1
Synonym Sb06g026250, SCE1A, ATSCE1, EMB1637, SCE1, AHUS5
Functional annotation ubiquitin-conjugating enzyme, putative, expressed
UniProt A0A1Z5RES0 , C5YEH3
Pfam PF00179
Panther DB PTHR24067 PTHR24067:SF110
NCBI CDD KOG0424; Ubiquitin-protein ligase
KEGG Orthology K10577; UBE2I, ubiquitin-conjugating enzyme E2 I
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G57870 : sumo conjugation enzyme 1
RAP-DB (Rice) LOC_Os04g49130.1 : ubiquitin-conjugating enzyme, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU2Hr1G094030.6 , HORVU2Hr1G094030.1 , HORVU2Hr1G094030.2 , HORVU2Hr1G094030.3 , HORVU2Hr1G094030.8 , HORVU2Hr1G094030.9 , HORVU2Hr1G094030.10 , HORVU2Hr1G094030.11
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G385300 auxin-independent growth promoter protein, putative, expressed -
2 Sobic.001G076600 hydrolase, acting on carbon-nitrogen, putative, expressed -
3 Sobic.003G376900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinesterase, putative, expressed -
4 Sobic.001G131900 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
5 Sobic.003G352900 OsFtsH3 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein
6 Sobic.004G298600 histone-lysine N-methyltransferase, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
7 Sobic.010G009700 OsFBX182 - F-box domain containing protein, expressed -
8 Sobic.005G045800 serine/threonine-protein kinase WNK4, putative, expressed K08867: WNK, WNK lysine deficient protein kinase
9 Sobic.001G380700 bZIP transcription factor family protein, putative, expressed -
10 Sobic.007G105700 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
11 Sobic.003G293400 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
12 Sobic.005G060100 growth regulator related protein, putative, expressed -
13 Sobic.006G119900 zinc finger, ZZ type family protein, expressed K17987: next to BRCA1 gene 1 protein
14 Sobic.007G086600 indole-3-glycerol phosphate synthase, chloroplast precursor, putative, expressed K01609: indole-3-glycerol phosphate synthase
15 Sobic.002G299500 expressed protein -
16 Sobic.007G144100 eukaryotic translation initiation factor 3 subunit C, putative, expressed K03252: translation initiation factor 3 subunit C
17 Sobic.001G073700 tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
18 Sobic.001G433600 - -
19 Sobic.010G013600 syntaxin, putative, expressed K08489: syntaxin 16
20 Sobic.005G048600 expressed protein -


Gene co-expression network
sample Sobic006G189000 Sobic006G189000 Sobic001G385300 Sobic001G385300 Sobic006G189000--Sobic001G385300 Sobic001G076600 Sobic001G076600 Sobic006G189000--Sobic001G076600 Sobic003G376900 Sobic003G376900 Sobic006G189000--Sobic003G376900 Sobic001G131900 Sobic001G131900 Sobic006G189000--Sobic001G131900 Sobic003G352900 Sobic003G352900 Sobic006G189000--Sobic003G352900 Sobic004G298600 Sobic004G298600 Sobic006G189000--Sobic004G298600 Sobic010G009700 Sobic010G009700 Sobic006G189000--Sobic010G009700 Sobic005G045800 Sobic005G045800 Sobic006G189000--Sobic005G045800 Sobic001G380700 Sobic001G380700 Sobic006G189000--Sobic001G380700 Sobic001G385300--Sobic003G376900 Sobic002G299500 Sobic002G299500 Sobic001G385300--Sobic002G299500 Sobic001G385300--Sobic003G352900 Sobic009G163100 Sobic009G163100 Sobic001G385300--Sobic009G163100 Sobic008G171900 Sobic008G171900 Sobic001G385300--Sobic008G171900 Sobic001G385300--Sobic005G045800 Sobic007G141600 Sobic007G141600 Sobic001G385300--Sobic007G141600 Sobic005G020600 Sobic005G020600 Sobic001G385300--Sobic005G020600 Sobic001G385300--Sobic004G298600 Sobic001G076600--Sobic003G352900 Sobic007G144100 Sobic007G144100 Sobic001G076600--Sobic007G144100 Sobic008G166100 Sobic008G166100 Sobic001G076600--Sobic008G166100 Sobic004G038400 Sobic004G038400 Sobic001G076600--Sobic004G038400 Sobic001G076600--Sobic002G299500 Sobic004G045632 Sobic004G045632 Sobic001G076600--Sobic004G045632 Sobic003G258100 Sobic003G258100 Sobic001G076600--Sobic003G258100 Sobic005G173700 Sobic005G173700 Sobic001G076600--Sobic005G173700 Sobic001G076600--Sobic003G376900 Sobic003G376900--Sobic002G299500 Sobic003G376900--Sobic009G163100 Sobic003G376900--Sobic003G352900 Sobic003G376900--Sobic008G171900 Sobic003G376900--Sobic001G385300 Sobic003G376900--Sobic005G020600 Sobic001G435700 Sobic001G435700 Sobic003G376900--Sobic001G435700 Sobic003G376900--Sobic005G045800 Sobic001G072000 Sobic001G072000 Sobic003G376900--Sobic001G072000 Sobic003G293400 Sobic003G293400 Sobic001G131900--Sobic003G293400 Sobic001G131900--Sobic003G352900 Sobic001G131900--Sobic004G038400 Sobic001G131900--Sobic001G076600 Sobic001G131900--Sobic001G385300 Sobic001G131900--Sobic005G045800 Sobic001G131900--Sobic004G298600 Sobic002G420100 Sobic002G420100 Sobic001G131900--Sobic002G420100 Sobic001G131900--Sobic007G144100 Sobic003G352900--Sobic007G144100 Sobic003G352900--Sobic002G299500 Sobic003G352900--Sobic001G076600 Sobic003G352900--Sobic003G376900 Sobic009G201000 Sobic009G201000 Sobic003G352900--Sobic009G201000 Sobic003G352900--Sobic005G045800 Sobic003G352900--Sobic009G163100 Sobic003G352900--Sobic001G385300 Sobic008G007600 Sobic008G007600 Sobic003G352900--Sobic008G007600 Sobic004G298600--Sobic001G385300 Sobic004G298600--Sobic001G131900 Sobic004G298600--Sobic003G293400 Sobic004G026600 Sobic004G026600 Sobic004G298600--Sobic004G026600 Sobic005G060100 Sobic005G060100 Sobic004G298600--Sobic005G060100 Sobic001G308500 Sobic001G308500 Sobic004G298600--Sobic001G308500 Sobic001G433600 Sobic001G433600 Sobic004G298600--Sobic001G433600 Sobic007G105700 Sobic007G105700 Sobic004G298600--Sobic007G105700 Sobic004G298600--Sobic003G352900 Sobic010G009700--Sobic004G298600 Sobic010G009700--Sobic001G131900 Sobic010G038200 Sobic010G038200 Sobic010G009700--Sobic010G038200 Sobic010G009700--Sobic006G189000 Sobic010G009700--Sobic005G060100 Sobic009G054400 Sobic009G054400 Sobic010G009700--Sobic009G054400 Sobic002G322700 Sobic002G322700 Sobic010G009700--Sobic002G322700 Sobic002G151500 Sobic002G151500 Sobic010G009700--Sobic002G151500 Sobic007G102300 Sobic007G102300 Sobic010G009700--Sobic007G102300 Sobic005G045800--Sobic003G352900 Sobic005G045800--Sobic003G376900 Sobic005G045800--Sobic001G385300 Sobic005G045800--Sobic002G299500 Sobic005G045800--Sobic001G131900 Sobic003G200000 Sobic003G200000 Sobic005G045800--Sobic003G200000 Sobic005G045800--Sobic008G171900 Sobic005G045800--Sobic009G163100 Sobic005G045800--Sobic007G144100 Sobic001G380700--Sobic001G385300 Sobic001G380700--Sobic001G131900 Sobic001G380700--Sobic004G298600 Sobic009G214500 Sobic009G214500 Sobic001G380700--Sobic009G214500 Sobic001G380700--Sobic007G105700 Sobic001G380700--Sobic001G433600 Sobic001G380700--Sobic006G189000 Sobic001G380700--Sobic003G376900 Sobic001G380700--Sobic003G293400
Octagon: transcription factors


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